G32513 (mapk1,LOC107386038)


Basic Information

Item Value
gene id G32513
gene name mapk1,LOC107386038
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1705974 ~ 1706887 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU47922
CTGACAAAAGCTTGCCGAATTTCTTGCTGCCTTCAAACAATTAGAATGTGCagccatacatttatttagcaagcaTGCATCAAAACCGCccaataatgtatatttataattttatataaaaaatgttctgtgttaacttcagcagaacaaaaacTAAGGCCCTTTTAAGATCTAGCGTTTCTATTCCCTTTGACCGCAGCTCTGGCATGGCGCTAAACACATTAGAGCAACACAGCGATTAGATCATACAAAACTACTCTCACTATCCACACGCCTACCGACTATTGATTTCGCTCCTAAAATTAACTCTTTACTAGAGCTTTTTGCATTGTCTCAGCCTACACGGTTGGAAAAGCGCACTGTTTGTGCCAGAGTACGCATTTTCAGCCTAAACATGAATATTTAGAAAGTGGAACTGAAAAAATtgaatgaatttgaatttaaaaacgACTTAATATTCGGTTCGTcttcttttttgctttaatgacgGCAGGACACCATCTCACACGCACAAAACCTGACCATGTTCtccagcatgaaaaaaaaacccttcagcTTCAATGGAAGAAGAACATAGCACTGTCTGTACGAAGGAGCCACATGATCAATCTCTCCTGACCTTTCATCTGGTCGATGGTGGGGGCTCGGATGATGTCGTTGATGCCGATGATGTTCTCGTGCTTGAAGCGGAGCAGGATTTTTATCTCGCGGAGCGTGCGCTGACAGTATGTCTGGTGCTCAAACGGACTGATTTTCTTTATCGCCACACGCACTTTATTATCACGATCATACGCCGAGC

Function

symbol description
mapk1 Predicted to enable MAP kinase activity. Acts upstream of or within gastrulation. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including EVL; brain; cardiovascular system; retina; and superficial blastomere. Human ortholog(s) of this gene implicated in Noonan syndrome 13; adenocarcinoma (multiple); pulmonary hypertension; and renal cell carcinoma. Orthologous to human MAPK1 (mitogen-activated protein kinase 1).

NR:

description
PREDICTED: mitogen-activated protein kinase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47922 True 799 lncRNA 0.42 2 1705974 1706887

Neighbor

gene id symbol gene type direction distance location
ppil2 ppil2 coding upstream 53558 1623097 ~ 1652416 (+)
gal3st1a gal3st1,gal3st1a,LOC107741514,LOC107653284,LOC107755837,LOC107668734 coding upstream 83647 1616062 ~ 1622327 (+)
pes pes1,pes,LOC107704970 coding upstream 93426 1603813 ~ 1612548 (+)
pole pole,LOC107704563,LOC107668756 coding upstream 108246 1579923 ~ 1597728 (+)
si:dkey-98f17.5 si:dkey-98f17.5,LOC107755832,LOC107599615,LOC107668759,LOC107704964,LOC108431725,LOC108255717,LOC107599159,LOC106580116 coding upstream 163590 1530761 ~ 1542384 (+)
LOC122344671 LOC107755842,LOC107599645,LOC107599132 coding downstream 36428 1743315 ~ 1745171 (+)
ydjc LOC107741491,LOC107704612,LOC107599608,LOC107755843,LOC107668745,LOC107599128 coding downstream 67078 1773965 ~ 1779426 (+)
ccl19a.1 LOC107704652,LOC107741512 coding downstream 87647 1794534 ~ 1796438 (+)
tctn2 LOC107704714,LOC107741513,LOC107599155 coding downstream 89947 1796834 ~ 1806041 (+)
sec14l8 sec14l8,LOC107741494,LOC107599607,LOC107668747,LOC107704732,LOC107755846,LOC107599126,LOC108431737,LOC108255515 coding downstream 100063 1806950 ~ 1820557 (+)
LOC122345819 NA non-coding upstream 8300 1690109 ~ 1697674 (+)
G32504 NA non-coding upstream 31618 1673029 ~ 1674356 (+)
G32499 NA non-coding upstream 52075 1653433 ~ 1653899 (+)
G32443 NA non-coding upstream 129704 1544752 ~ 1576270 (+)
G32439 NA non-coding upstream 192425 1513050 ~ 1513549 (+)
G32538 NA non-coding downstream 53107 1759994 ~ 1760230 (+)
G32539 NA non-coding downstream 54677 1761564 ~ 1761971 (+)
G32540 NA non-coding downstream 55118 1762005 ~ 1762282 (+)
LOC122346170 NA non-coding downstream 56034 1762921 ~ 1765407 (+)
G32542 NA non-coding downstream 59709 1766596 ~ 1766890 (+)
selenoe fep15,LOC107667262,LOC107566481,LOC107750764,LOC108443918,LOC101066385,LOC105931211,LOC100703742 other upstream 590569 1112264 ~ 1115405 (+)
G32277 NA other upstream 648821 1055193 ~ 1057153 (+)
tal2 tal2,LOC107594599,LOC107725114,LOC107723303,LOC107667406 other upstream 1254609 450168 ~ 451365 (+)
LOC122346012 cunh9orf84,LOC107704297 other upstream 1258488 432779 ~ 447486 (+)
susd1 susd1,LOC107594557,LOC107704917,LOC107572260,LOC107667560 other upstream 1274509 419242 ~ 431465 (+)
ccl19a.2 ccl19a.2,LOC107704660,LOC107755825,LOC107599642,LOC107668736,LOC107599131,LOC107741495 other downstream 84941 1791828 ~ 1793266 (+)
G32611 prrc2b,LOC107704672 other downstream 115767 1822654 ~ 1826114 (+)
G32620 prrc2b,LOC107704672,LOC107562325 other downstream 128261 1835148 ~ 1843013 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other downstream 193740 1900627 ~ 1905499 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other downstream 303330 2010217 ~ 2019150 (+)

Expression


Co-expression Network