G32596 (LOC107704652,LOC107741512)


Basic Information

Item Value
gene id G32596
gene name LOC107704652,LOC107741512
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1794504 ~ 1796557 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU48023
AGGGGAGATTATGGTCATTATGTTTAGTCTTAAAGTACAGTCAggttttaaatatacacattttcatgCGTTTATGCGTTTAGTCAGGAGTTCgtataaaaaatacaatccCACCAATATTTGTTGTCAAccaatttattcaatttaaaaaaaacgcaaCAAGATGATTGTATAAAAAATAGAGTTATTTGTTCACACAACAGCAACTACCGAAAAGATCAAACAGCTTGGAGTCTTTCAACAATTTAGGTTGAAAATGCTGAAAAGAGGAAGAACCTAAATGTGTTACAGAAACAGAAGCGAGCTAGGTCACAGTGACTTCATCAGCTGCCATTAAAAGCATATATGCACGTGTATATGTGTTAAAAAGACAAATCCCTCAGGCCTTGACAGCGTTTGCCCTGAAATAAAAGCACACAGAGAAAACCATTAGTTAAAGCCTGCTTGTGAAAAGATGTCGCACTTTTATTCGACCTGAAATGAATTGTTCTAATAGTTCTTATTATAACggcttgaaatgcattttagctGCGCATAATATTATGCAACATGCACGAGTCCTCGTTGTTGGTGGTCGGCTCAAAAATTTGCCCTGTGAGGATGTTTTGTCTTGTGGTTTCACAGCTGAACAGTTTGTGGTTTTACATGAGTAATACTACAACATCCAGATCGTGATCTACGACGTATAAACAATGTAGTGAGTCAGATGTGAACaagaaaagagaaagtgagCCAAAAATGACGAGCCGTTGTTGCAAGCAGCTTTACGTCATCCGACACTACAGAAGATGACTAAGGGAACAAAACTGAGACGGATCCGAGGTCAGTTACGTACGTGGAATTTGATTTCTTTGCACTTCTTCAATCTGGTGTCCAGAAACTTGACTGTGTCTTTAACCCATTCCTCCTCCGCTGCAGGTGGGGCGCAAAGCCTCAAAGCCTTCCTTGTCATGAATCTGAAAGAGATATGATTTCTGCACGTTATTCGACTAGAACCGCAGACAATTCGAGCATTGTGCGTCGAGGGCAATTGGAATTCCCCATTAAACAGGCTCTCTCACATCTGCTCTGTATGAAAGTCTGGCCGTAAATAGTTTAATTCACTCCCACACACACGAGCCGGGCCAGTAGCTTGCTTTGGAGAATATACTTACACGACAGCATCTCGGGGGCAGCCGTCGACTCTGAATTGCTTCCGGTAAGTGAGGAGGACTTGTTTAGGGATGACTTTGTGGCTAACTGTCAGGCAGCAGTCCAGTGCCAAGTCCGCCTGAGCCTCTGAGAGAGAtacTGCCGGATCGCTGTGGAGGACGAGTGCCAAGGCACAGAGAATCACACTCAGCACAGACACGTGGGATAAAGCCATGATGACCGCCAGACGAGACGAGATGAGacgagatgagatgagatgatgGAGTCTGTCTTGCTGAAGCAGCTTGAGGGTCTGTGTCTCTTCTCTGACTCTCTCCTCTCACTGCTCCATCGCCACCCTGCTTTAAAGGACAGTCTTAAGTTTCATTATTA

Function

NR:

description
PREDICTED: monocyte chemotactic protein 1B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48023 True 1524 lncRNA 0.43 2 1794504 1796557

Neighbor

gene id symbol gene type direction distance location
ube2l3b ube2l3,ube2l3b,ube2l3a,ub2l3,LOC106562742,LOC107599129,LOC105014760 coding downstream 9115 1780165 ~ 1785389 (-)
sdf2l1 sdf2l1,LOC107704634,LOC107755844,LOC107668746 coding downstream 22712 1769436 ~ 1771792 (-)
top3b top3b,LOC107705001 coding downstream 48808 1733099 ~ 1745696 (-)
ppm1f ppm1f,LOC107599133,LOC107741489,LOC107755823,LOC107668739,LOC107704983 coding downstream 62367 1721233 ~ 1732137 (-)
mapk1 mapk1,LOC107741490,LOC107704570,LOC107599610,LOC107386038 coding downstream 76603 1696432 ~ 1717901 (-)
LOC122344761 ngly1,LOC107748685,LOC107696895,LOC107739561,LOC107688325,LOC107579448 coding upstream 97223 1893780 ~ 1898590 (-)
LOC122344882 gnrhr4,LOC107715601,LOC107575089,LOC107690392,LOC107715190,LOC107691141 coding upstream 256148 2052705 ~ 2058733 (-)
LOC122346063 LOC107747844,LOC107554104,LOC107556635,LOC107667225 coding upstream 291228 2087785 ~ 2090156 (-)
LOC122345768 LOC107562125,LOC107690349,LOC107554462,LOC107715242 coding upstream 293595 2090152 ~ 2099181 (-)
LOC122346100 LOC107757959,LOC107587426,LOC107709681,LOC107681216,LOC107560221,LOC107560220 coding upstream 588594 2385151 ~ 2418053 (-)
G32586 NA non-coding downstream 27624 1766598 ~ 1766880 (-)
G32583 NA non-coding downstream 30856 1763275 ~ 1763648 (-)
G32581 NA non-coding downstream 31675 1762478 ~ 1762829 (-)
G32579 NA non-coding downstream 34647 1759644 ~ 1759857 (-)
G32572 NA non-coding downstream 127598 1666698 ~ 1666906 (-)
G32654 NA non-coding upstream 52267 1848824 ~ 1882392 (-)
G32656 NA non-coding upstream 54671 1851228 ~ 1893075 (-)
G32675 NA non-coding upstream 169772 1966329 ~ 1966532 (-)
G32681 NA non-coding upstream 199719 1996276 ~ 1996843 (-)
G32682 LOC107551460,LOC107556260,LOC107715220,LOC107691117,LOC107714787,LOC107690391 non-coding upstream 203328 1999885 ~ 2000457 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other downstream 100218 1673024 ~ 1694286 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other downstream 440090 1342606 ~ 1354414 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other downstream 458317 1312604 ~ 1336187 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other downstream 1163378 622514 ~ 631126 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other downstream 1211409 556654 ~ 583095 (-)
G32676 NA other upstream 170080 1966637 ~ 1967748 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other upstream 223539 2020096 ~ 2022922 (-)
G32857 NA other upstream 699947 2496504 ~ 2554146 (-)
snrnp27 snrnp27 other upstream 783991 2580548 ~ 2585452 (-)
add2 add2,LOC107668755 other upstream 790030 2586587 ~ 2605917 (-)

Expression


Co-expression Network