G32611 (prrc2b,LOC107704672)


Basic Information

Item Value
gene id G32611
gene name prrc2b,LOC107704672
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1822654 ~ 1826114 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU48046
CTCGATTTCTCGCGacggcagcagcagcagcttcaTTCTCAGGTCGGGAAACTGACAACAAgcgaaaagagaaaaacatagAGAAATCTGCATCCATCCTGCCGAGTTTCTCTATCCGGTGGAAATATATCGATATATGTGATCTGAATCGACAGTCGTACGTTCAATCGAAACAGACGGTACTGAGGAAGAGGTGCAAAGAAAAATTTCCATACTCGATGACATTACATCGCAATGTCCGATCGTTTGGGGCAAATAACCAAGTCCAAGGATGGGAAAAGCAAGTATTCATCACTCAGCCTATTTGACAAGTACAAAGGGAAGTCAATAGAAACTCAGAAAACCACAGTTGTTGCACGACATGGCTTACAGAGTCTTGGCAAAGTGGCCGCTGCCCGGCGCATGCCCCCTCCCGCTCACCTGCCGAGTCTGAAGTCTGAGAGTAAAGGAAACGATCCCAACGTGATTATCGTGCCCAAAGACGGTACAGGATGGGCAAACAAG

Function

symbol description
prrc2b Orthologous to human PRRC2B (proline rich coiled-coil 2B).

NR:

description
protein PRRC2B isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48046 True 504 TUCP 0.47 3 1822654 1826114

Neighbor

gene id symbol gene type direction distance location
sec14l8 sec14l8,LOC107741494,LOC107599607,LOC107668747,LOC107704732,LOC107755846,LOC107599126,LOC108431737,LOC108255515 coding upstream 2097 1806950 ~ 1820557 (+)
tctn2 LOC107704714,LOC107741513,LOC107599155 coding upstream 16613 1796834 ~ 1806041 (+)
ccl19a.1 LOC107704652,LOC107741512 coding upstream 26216 1794534 ~ 1796438 (+)
ydjc LOC107741491,LOC107704612,LOC107599608,LOC107755843,LOC107668745,LOC107599128 coding upstream 43228 1773965 ~ 1779426 (+)
LOC122344671 LOC107755842,LOC107599645,LOC107599132 coding upstream 77483 1743315 ~ 1745171 (+)
LOC122346045 ddr2l,LOC107704361,LOC107550294,LOC107725118,LOC107667359,LOC107723312 coding downstream 25493 1851607 ~ 1864706 (+)
LOC122346048 prodhb,prodha,LOC107730849,LOC107704395,LOC107661597,LOC106568196 coding downstream 39481 1865595 ~ 1876048 (+)
LOC122345240 rab5aa,LOC107592022,LOC105904716,LOC101476881,LOC100701272 coding downstream 51971 1878085 ~ 1880008 (+)
LOC122345241 kat2b,LOC107748684,LOC107696888,LOC107593605,LOC107592021,LOC107739562,LOC107688328,LOC108411559 coding downstream 55901 1882015 ~ 1892104 (+)
LOC122346055 nutf2l,LOC107592026,LOC107748755,LOC107697171,LOC107688399,LOC107593625,LOC107739636,LOC108410494,LOC103027823 coding downstream 73481 1899595 ~ 1900425 (+)
G32552 NA non-coding upstream 37012 1785401 ~ 1785642 (+)
G32542 NA non-coding upstream 55764 1766596 ~ 1766890 (+)
LOC122346170 NA non-coding upstream 57247 1762921 ~ 1765407 (+)
G32540 NA non-coding upstream 60372 1762005 ~ 1762282 (+)
G32539 NA non-coding upstream 60683 1761564 ~ 1761971 (+)
G32643 NA non-coding downstream 132004 1958118 ~ 1958584 (+)
G32644 NA non-coding downstream 140065 1966179 ~ 1966378 (+)
G32646 NA non-coding downstream 165435 1991549 ~ 1993168 (+)
G32642 NA non-coding downstream 169906 1996020 ~ 1997056 (+)
G32649 NA non-coding downstream 172065 1998179 ~ 1998680 (+)
ccl19a.2 ccl19a.2,LOC107704660,LOC107755825,LOC107599642,LOC107668736,LOC107599131,LOC107741495 other upstream 29388 1791828 ~ 1793266 (+)
selenoe fep15,LOC107667262,LOC107566481,LOC107750764,LOC108443918,LOC101066385,LOC105931211,LOC100703742 other upstream 707249 1112264 ~ 1115405 (+)
G32277 NA other upstream 765501 1055193 ~ 1057153 (+)
tal2 tal2,LOC107594599,LOC107725114,LOC107723303,LOC107667406 other upstream 1371289 450168 ~ 451365 (+)
LOC122346012 cunh9orf84,LOC107704297 other upstream 1375168 432779 ~ 447486 (+)
G32620 prrc2b,LOC107704672,LOC107562325 other downstream 9034 1835148 ~ 1843013 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other downstream 74513 1900627 ~ 1905499 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other downstream 184103 2010217 ~ 2019150 (+)
G32706 LOC107560224,LOC107681222,LOC107709689,LOC107690695,LOC107757958,LOC107587469 other downstream 439031 2265145 ~ 2268194 (+)
LOC122345783 npffr1l2,LOC107755826,LOC107599640,LOC107668729,LOC107708240,LOC107654224 other downstream 800970 2627084 ~ 2649361 (+)

Expression


Co-expression Network