G32620 (prrc2b,LOC107704672,LOC107562325)


Basic Information

Item Value
gene id G32620
gene name prrc2b,LOC107704672,LOC107562325
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1835148 ~ 1843013 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU48056
GGGGAAAGATCCTAGAGAAAGACTTGAAGTCCAGAAACATGAAGGGGGACATGACTGAACCACTGTCCCAATATGACCTCAACAGTTACCCAATTGAGAGTGACTCTGGAGGATCTGTACCCAGTACAGAGGTTTTCCAGGACgctctctccaaaaaaacagcCCGCCCACAGGATGATGATCGAAGGAGAAAAGATCAGGGTCCTCCAGGTTCGGTAAAGAATAGAACAATTACTTCGAAAATGCCCCCCCGTTTTGCCAAGAAGCAAGGCAGCATGTCCATCGAGCAGCCCGAGGAGACGCTCTCCACCAACAACTTGGGAACAGAGATCTGGGAGACAAACAGCACCGCTCTGACTGTCCAGTCGCCAGGTGGAGATTCA

Function

symbol description
prrc2b Orthologous to human PRRC2B (proline rich coiled-coil 2B).

NR:

description
PREDICTED: protein PRRC2B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48056 True 383 TUCP 0.51 4 1835148 1843013

Neighbor

gene id symbol gene type direction distance location
sec14l8 sec14l8,LOC107741494,LOC107599607,LOC107668747,LOC107704732,LOC107755846,LOC107599126,LOC108431737,LOC108255515 coding upstream 14591 1806950 ~ 1820557 (+)
tctn2 LOC107704714,LOC107741513,LOC107599155 coding upstream 29107 1796834 ~ 1806041 (+)
ccl19a.1 LOC107704652,LOC107741512 coding upstream 38710 1794534 ~ 1796438 (+)
ydjc LOC107741491,LOC107704612,LOC107599608,LOC107755843,LOC107668745,LOC107599128 coding upstream 55722 1773965 ~ 1779426 (+)
LOC122344671 LOC107755842,LOC107599645,LOC107599132 coding upstream 89977 1743315 ~ 1745171 (+)
LOC122346045 ddr2l,LOC107704361,LOC107550294,LOC107725118,LOC107667359,LOC107723312 coding downstream 8594 1851607 ~ 1864706 (+)
LOC122346048 prodhb,prodha,LOC107730849,LOC107704395,LOC107661597,LOC106568196 coding downstream 22582 1865595 ~ 1876048 (+)
LOC122345240 rab5aa,LOC107592022,LOC105904716,LOC101476881,LOC100701272 coding downstream 35072 1878085 ~ 1880008 (+)
LOC122345241 kat2b,LOC107748684,LOC107696888,LOC107593605,LOC107592021,LOC107739562,LOC107688328,LOC108411559 coding downstream 39002 1882015 ~ 1892104 (+)
LOC122346055 nutf2l,LOC107592026,LOC107748755,LOC107697171,LOC107688399,LOC107593625,LOC107739636,LOC108410494,LOC103027823 coding downstream 56582 1899595 ~ 1900425 (+)
G32552 NA non-coding upstream 49506 1785401 ~ 1785642 (+)
G32542 NA non-coding upstream 68258 1766596 ~ 1766890 (+)
LOC122346170 NA non-coding upstream 69741 1762921 ~ 1765407 (+)
G32540 NA non-coding upstream 72866 1762005 ~ 1762282 (+)
G32539 NA non-coding upstream 73177 1761564 ~ 1761971 (+)
G32643 NA non-coding downstream 115105 1958118 ~ 1958584 (+)
G32644 NA non-coding downstream 123166 1966179 ~ 1966378 (+)
G32646 NA non-coding downstream 148536 1991549 ~ 1993168 (+)
G32642 NA non-coding downstream 153007 1996020 ~ 1997056 (+)
G32649 NA non-coding downstream 155166 1998179 ~ 1998680 (+)
G32611 prrc2b,LOC107704672 other upstream 9034 1822654 ~ 1826114 (+)
ccl19a.2 ccl19a.2,LOC107704660,LOC107755825,LOC107599642,LOC107668736,LOC107599131,LOC107741495 other upstream 41882 1791828 ~ 1793266 (+)
selenoe fep15,LOC107667262,LOC107566481,LOC107750764,LOC108443918,LOC101066385,LOC105931211,LOC100703742 other upstream 719743 1112264 ~ 1115405 (+)
G32277 NA other upstream 777995 1055193 ~ 1057153 (+)
tal2 tal2,LOC107594599,LOC107725114,LOC107723303,LOC107667406 other upstream 1383783 450168 ~ 451365 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other downstream 57614 1900627 ~ 1905499 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other downstream 167204 2010217 ~ 2019150 (+)
G32706 LOC107560224,LOC107681222,LOC107709689,LOC107690695,LOC107757958,LOC107587469 other downstream 422132 2265145 ~ 2268194 (+)
LOC122345783 npffr1l2,LOC107755826,LOC107599640,LOC107668729,LOC107708240,LOC107654224 other downstream 784071 2627084 ~ 2649361 (+)
tbx1 tbx1,LOC107755862,LOC107699917,LOC107708247 other downstream 1485787 3328800 ~ 3343070 (+)

Expression


Co-expression Network