G32654


Basic Information

Item Value
gene id G32654
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1848824 ~ 1882392 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU48107
CCTTGCACGAGGAATATACGCCGAGTTTCTCCAGTTTCTTCGGACGCGGGGAGGAGCGGAGCTGCGCCTTCTTGACGGCGATACGTGCAGAACCGACAGCAGCGCCCGAACACTCGGTTCCACCGACTCCTGGCGCAGCCGCAGCCGAGCCCGCTGCACCCACTGCCGGGGAGCCCTGAGGAATCCCCGCGCTCTCCGACATCGAGCCTGCTTCCGCGCTCCGACTCGAATCCTCGAAGTCCGCCAGCTGTATTCGCTCTCTCTACCCCTCAACAGCGGGATCAGACATGGCGACTTCTTGAC

Function

GO: NA

KEGG:

id description
ko04710 Circadian rhythm

RNA

RNA id representative length rna type GC content exon number start site end site
TU48107 True 303 lncRNA 0.64 2 1848824 1882392

Neighbor

gene id symbol gene type direction distance location
ube2l3b ube2l3,ube2l3b,ube2l3a,ub2l3,LOC106562742,LOC107599129,LOC105014760 coding downstream 63435 1780165 ~ 1785389 (-)
sdf2l1 sdf2l1,LOC107704634,LOC107755844,LOC107668746 coding downstream 77032 1769436 ~ 1771792 (-)
top3b top3b,LOC107705001 coding downstream 103128 1733099 ~ 1745696 (-)
ppm1f ppm1f,LOC107599133,LOC107741489,LOC107755823,LOC107668739,LOC107704983 coding downstream 116687 1721233 ~ 1732137 (-)
mapk1 mapk1,LOC107741490,LOC107704570,LOC107599610,LOC107386038 coding downstream 130923 1696432 ~ 1717901 (-)
LOC122344761 ngly1,LOC107748685,LOC107696895,LOC107739561,LOC107688325,LOC107579448 coding upstream 11388 1893780 ~ 1898590 (-)
LOC122344882 gnrhr4,LOC107715601,LOC107575089,LOC107690392,LOC107715190,LOC107691141 coding upstream 170313 2052705 ~ 2058733 (-)
LOC122346063 LOC107747844,LOC107554104,LOC107556635,LOC107667225 coding upstream 205393 2087785 ~ 2090156 (-)
LOC122345768 LOC107562125,LOC107690349,LOC107554462,LOC107715242 coding upstream 207760 2090152 ~ 2099181 (-)
LOC122346100 LOC107757959,LOC107587426,LOC107709681,LOC107681216,LOC107560221,LOC107560220 coding upstream 502759 2385151 ~ 2418053 (-)
G32596 LOC107704652,LOC107741512 non-coding downstream 52267 1794504 ~ 1796557 (-)
G32586 NA non-coding downstream 81944 1766598 ~ 1766880 (-)
G32583 NA non-coding downstream 85176 1763275 ~ 1763648 (-)
G32581 NA non-coding downstream 85995 1762478 ~ 1762829 (-)
G32579 NA non-coding downstream 88967 1759644 ~ 1759857 (-)
G32675 NA non-coding upstream 83937 1966329 ~ 1966532 (-)
G32681 NA non-coding upstream 113884 1996276 ~ 1996843 (-)
G32682 LOC107551460,LOC107556260,LOC107715220,LOC107691117,LOC107714787,LOC107690391 non-coding upstream 117493 1999885 ~ 2000457 (-)
G32688 NA non-coding upstream 134986 2017378 ~ 2030493 (-)
G32701 NA non-coding upstream 340953 2223345 ~ 2224056 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other downstream 154538 1673024 ~ 1694286 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other downstream 494410 1342606 ~ 1354414 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other downstream 512637 1312604 ~ 1336187 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other downstream 1217698 622514 ~ 631126 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other downstream 1265729 556654 ~ 583095 (-)
G32676 NA other upstream 84245 1966637 ~ 1967748 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other upstream 137704 2020096 ~ 2022922 (-)
G32857 NA other upstream 614112 2496504 ~ 2554146 (-)
snrnp27 snrnp27 other upstream 698156 2580548 ~ 2585452 (-)
add2 add2,LOC107668755 other upstream 704195 2586587 ~ 2605917 (-)

Expression


Co-expression Network