G32682 (LOC107551460,LOC107556260,LOC107715220,LOC107691117,LOC107714787,LOC107690391)


Basic Information

Item Value
gene id G32682
gene name LOC107551460,LOC107556260,LOC107715220,LOC107691117,LOC107714787,LOC107690391
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1999885 ~ 2000457 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU48148
GCGATACTTTTCCTACATCTCATCTTAAAGCTTGTTGCACGCTGTAGTATCTATGCAATGGACTGCAGTTTCTTGTGTGCACTAAAACAGGTTTGTGATTGATATACCTGAGATTAGAATAAGagcctctttttttgttttttttttcttgtgaagaTCATGTTTGGCGCCGTCTGCTCTTTATTTATGGAGATGCTGGAGGCGCTTCGGTCGCTGCTGTTTGCAGGAGCCAATTAAGCTGCCGGTCCACAGCATTGCCGCTTTCCATCTGCAAAGTTTGTGAAatctcccttctttctttcctcccaGAAACGCCAGCAGTGCCTTCGACCATCCAGAAAGTCAGACGCCGAAAAAGCAACGTTTATTAGACCAGAGCATGCCCTCGCAATCTCCTTCCAACGGACATCTCGGCTCCTCCGTGAGCCGTAGCTCTTCCACTCACGGAAACGCAAGTTTGCAAAGGAGCAGCGGCGTGGCTCAGCAGAGCCCCGATGGTCTTTACCAGCGGCACAAGCTCGCGGAGTCCAACAGCGTACCCAAACCAGAACAGCCGGAACCAGCGCAGCAGCC

Function

NR:

description
PREDICTED: RNA polymerase II elongation factor ELL-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48148 True 573 lncRNA 0.50 1 1999885 2000457

Neighbor

gene id symbol gene type direction distance location
LOC122344761 ngly1,LOC107748685,LOC107696895,LOC107739561,LOC107688325,LOC107579448 coding downstream 101295 1893780 ~ 1898590 (-)
ube2l3b ube2l3,ube2l3b,ube2l3a,ub2l3,LOC106562742,LOC107599129,LOC105014760 coding downstream 214496 1780165 ~ 1785389 (-)
sdf2l1 sdf2l1,LOC107704634,LOC107755844,LOC107668746 coding downstream 228093 1769436 ~ 1771792 (-)
top3b top3b,LOC107705001 coding downstream 254189 1733099 ~ 1745696 (-)
ppm1f ppm1f,LOC107599133,LOC107741489,LOC107755823,LOC107668739,LOC107704983 coding downstream 267748 1721233 ~ 1732137 (-)
LOC122344882 gnrhr4,LOC107715601,LOC107575089,LOC107690392,LOC107715190,LOC107691141 coding upstream 52248 2052705 ~ 2058733 (-)
LOC122346063 LOC107747844,LOC107554104,LOC107556635,LOC107667225 coding upstream 87328 2087785 ~ 2090156 (-)
LOC122345768 LOC107562125,LOC107690349,LOC107554462,LOC107715242 coding upstream 89695 2090152 ~ 2099181 (-)
LOC122346100 LOC107757959,LOC107587426,LOC107709681,LOC107681216,LOC107560221,LOC107560220 coding upstream 384694 2385151 ~ 2418053 (-)
purba LOC107737074,LOC107755849,LOC107668742,LOC107670383,LOC107599601,LOC108431741,LOC107580671 coding upstream 524102 2524559 ~ 2527337 (-)
G32681 NA non-coding downstream 3042 1996276 ~ 1996843 (-)
G32675 NA non-coding downstream 33353 1966329 ~ 1966532 (-)
G32656 NA non-coding downstream 106810 1851228 ~ 1893075 (-)
G32654 NA non-coding downstream 117493 1848824 ~ 1882392 (-)
G32596 LOC107704652,LOC107741512 non-coding downstream 203328 1794504 ~ 1796557 (-)
G32688 NA non-coding upstream 16921 2017378 ~ 2030493 (-)
G32701 NA non-coding upstream 222888 2223345 ~ 2224056 (-)
G32703 NA non-coding upstream 243210 2243667 ~ 2243883 (-)
G32707 NA non-coding upstream 268363 2268820 ~ 2269330 (-)
LOC122346102 NA non-coding upstream 355509 2355966 ~ 2356780 (-)
G32676 NA other downstream 32137 1966637 ~ 1967748 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other downstream 305599 1673024 ~ 1694286 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other downstream 645471 1342606 ~ 1354414 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other downstream 663698 1312604 ~ 1336187 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other downstream 1368759 622514 ~ 631126 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other upstream 19639 2020096 ~ 2022922 (-)
G32857 NA other upstream 496047 2496504 ~ 2554146 (-)
snrnp27 snrnp27 other upstream 580091 2580548 ~ 2585452 (-)
add2 add2,LOC107668755 other upstream 586130 2586587 ~ 2605917 (-)
LOC122344624 LOC107699921,LOC107708239,LOC107755860,LOC107697241,LOC107551809 other upstream 935286 2935743 ~ 3012819 (-)

Expression


Co-expression Network