LOC122344636 (pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461)


Basic Information

Item Value
gene id LOC122344636
gene name pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 2020096 ~ 2022922 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU48163
GTCGAATGTTCTATTGCCTATCCCACTGTCTGTTTTAGCTTTTTTCGACATAATGTCATACTCTCTAAATCTCTTATAATTGCGAAATAggtcatttgttttgtaagCGCGACACAATAATGATTTACTAAAAGGGGTGCGAAGTTTGTTCTTTGGTTCCGACGCGTGTTTTGTATGTTGCCTGAACTTTCACCTCGATTCCCACAGCCCAGCAGGACCGTGTGGATTTGACAAAATAGTGACAAGTCTAACACGAGCTTTTAACTTCGAGCATGCGTTGCCTGTTGAGCTCTTGGTAATTTATTCCTGGAAGAACCGCGTTCTGTTGCAGCCACATGGAAACTTTCATCAGCTTCAGTAACCAAAGTCAAGGAAGGGACCGTATATTCAGttttcaggcTTGGGAACACCGTCAACTCGATCCATGCGGCCAAGAGCACTCTTCACATTTCTGACCCCATTTTGCGCTTTTGCCTTACTTTTACCAATCTCAACCGTGCCTTGTATTTCATCTGTGACAACGTACTCTGGGCCAGAAGTATCGGGCTGATACAAGACATCGACAAAGAGCGCTGGAGCTTGAACTCCACTCGCTTCTATTTCCTGTCCTTGGTCACGAATCTAACCAGAGACGTCTATGTGATCATCCAGCTCATGGTGCAGAAGTCCCGGGAACGACACTTCAAGCAAAAAATGGAGCAGCACCTCAACGAAAGCCCGGACGTGGCCTGCGTCATCGTGCCTCAGCTCGACGCGTTCCTCTTCCTTCTCCTCGAGAGCCTCAGAAACGAACCGTCTGTGGCTCTCGATACCGTTAAAAACGTCTGCGACCTTTTCATTCCGCTCGACAAACTGGGCATTTACCAAACAAATGCAGGGGTGGTGGGCTTCTGTGGCCTCGTTTCTTCTATTTTGGGCATATTGTCAGTTTTGAGGCCCGGCCTCAAGATCAAGCCGTGATTTGGGGAATGAGGAAAAGGCTTTAGGAACATCCAAAATGTCTTGCATAAGAAAACTTTTCTAACAGATGTTTTGAATTCGTTTTAGTGTGGGATTAGACTACTGTTGaacttgctttttttaaagggatCGATTTAATAGTATAAAGGGAGACAGGAGAGCAGCGCATACCCATAATGCAGCAGCGCACCTGCAGGGCTGTTCTgcacaacataataataaaaaataatagcgTCATTTAGATAAGATTTTACAGTGTGGGTTTGAACGCATGCTGTGTACACTTTCATTAAATAGAGTGCCTTGCTGTATCTGTTATATTATGTAGCCTTAGTGAAATAATACCATCTGTATATAATGCagtatttgtagttttaatagAGATCATGTCACTTTGGTACTGAGGATACTGAAACACGCGggttcataaaaatgcattttgaactTTCCAACAAAAAGATGCTCTTTTGTGATAGCAGATGCTCAACTTCCTGAGATATGTGCTTAATATTTAGTCTCTTCTACATGGAAAACCATCTGTGAAATTAGATATTCTACCTCGTTCTGACAGATCCGTAGTTGTTTACAGATGTGCGTTTGATTTTTAGGTGCCAGACAGAgttttgttggggttttttttttttttttttttttttttcaattttggtTTCTCATGACAAAAGATAAGTTATTACATTCCGATTCGACATATTTGCTTGTCAGCTcaaactgctttaaaacaaactgtgaACTTTtaataaaggattttt
>XM_043238158.1
gttcaAAAGAATCGATTCCGGAAAACGAGTCGAATGTTCTATTGCCTATCCCACTGTCTGTTTTAGCTTTTTTCGACATAATGTCATACTCTCTAAATCTCTTATAATTGCGAAATAggtcatttgttttgtaagCGCGACACAATAATGATTTACTAAAAGGGGTGCGAAGTTTGTTCTTTGGTTCCGACGCGTGTTTTGTATGTTGCCTGAACTTTCACCTCGATTCCCACAGCCCAGCAGGACCGTGTGGATTTGACAAAATAGTGACAAGTCTAACACGAGCTTTTAACTTCGAGCATGCGTTGCCTGTTGAGCTCTTGGTAATTTATTCCTGGAAGAACCGCGTTCTGTTGCAGCCACATGGAAACTTTCATCAGCTTCAGTAACCAAAGTCAAGGAAGGGACCGTATATTCAGAGCAACCCAATATGCATGTGCTCTGGCGAAATACCTGCTGAGAAATGAAGCGAAGAGAAAAGAGCTGGTGAAAAAGCTGCAGTTTCTGGAGTCCAATATGAGTTCGGGGCGGAAGCttttcaggcTTGGGAACACCGTCAACTCGATCCATGCGGCCAAGAGCACTCTTCACATTTCTGACCCCATTTTGCGCTTTTGCCTTACTTTTACCAATCTCAACCGTGCCTTGTATTTCATCTGTGACAACGTACTCTGGGCCAGAAGTATCGGGCTGATACAAGACATCGACAAAGAGCGCTGGAGCTTGAACTCCACTCGCTTCTATTTCCTGTCCTTGGTCACGAATCTAACCAGAGACGTCTATGTGATCATCCAGCTCATGGTGCAGAAGTCCCGGGAACGACACTTCAAGCAAAAAATGGAGCAGCACCTCAACGAAAGCCCGGACGTGGCCTGCGTCATCGTGCCTCAGCTCGACGCGTTCCTCTTCCTTCTCCTCGAGAGCCTCAGAAACGAACCGTCTGTGGCTCTCGATACCGTTAAAAACGTCTGCGACCTTTTCATTCCGCTCGACAAACTGGGCATTTACCAAACAAATGCAGGGGTGGTGGGCTTCTGTGGCCTCGTTTCTTCTATTTTGGGCATATTGTCAGTTTTGAGGCCCGGCCTCAAGATCAAGCCGTGATTTGGGGAATGAGGAAAAGGCTTTAGGAACATCCAAAATGTCTTGCATAAGAAAACTTTTCTAACAGATGTTTTGAATTCGTTTTAGTGTGGGATTAGACTACTGTTGaacttgctttttttaaagggatCGATTTAATAGTATAAAGGGAGACAGGAGAGCAGCGCATACCCATAATGCAGCAGCGCACCTGCAGGGCTGTTCTgcacaacataataataaaaaataatagcgTCATTTAGATAAGATTTTACAGTGTGGGTTTGAACGCATGCTGTGTACACTTTCATTAAATAGAGTGCCTTGCTGTATCTGTTATATTATGTAGCCTTAGTGAAATAATACCATCTGTATATAATGCagtatttgtagttttaatagAGATCATGTCACTTTGGTACTGAGGATACTGAAACACGCGggttcataaaaatgcattttgaactTTCCAACAAAAAGATGCTCTTTTGTGATAGCAGATGCTCAACTTCCTGAGATATGTGCTTAATATTTAGTCTCTTCTACATGGAAAACCATCTGTGAAATTAGATATTCTACCTCGTTCTGACAGATCCGTAGTTGTTTACAGATGTGCGTTTGATTTTTAGGTGCCAGACAGAgttttgttggggttttttttttttttttttttttttttcaattttggtTTCTCATGACAAAAGATAAGTTATTACATTCCGATTCGACATATTTGCTTGTCAGCTcaaactgctttaaaacaaactgtgaACTTTtaataaaggatttttttatgCACCGTT

Function

symbol description
pex11a Predicted to be involved in peroxisome fission and regulation of peroxisome size. Predicted to be located in membrane and peroxisome. Predicted to be integral component of peroxisomal membrane. Predicted to be active in peroxisomal membrane. Orthologous to human PEX11A (peroxisomal biogenesis factor 11 alpha).

NR:

description
PREDICTED: peroxisomal membrane protein 11A-like

GO:

id name namespace
GO:0016559 peroxisome fission biological_process
GO:0005779 integral component of peroxisomal membrane cellular_component

KEGG:

id description
K13351 PEX11A; peroxin-11A

RNA

RNA id representative length rna type GC content exon number start site end site
TU48163 False 1730 TUCP 0.42 2 2020108 2022894
XM_043238158.1 True 1886 mRNA 0.42 3 2020096 2022922

Neighbor

gene id symbol gene type direction distance location
LOC122344761 ngly1,LOC107748685,LOC107696895,LOC107739561,LOC107688325,LOC107579448 coding downstream 121506 1893780 ~ 1898590 (-)
ube2l3b ube2l3,ube2l3b,ube2l3a,ub2l3,LOC106562742,LOC107599129,LOC105014760 coding downstream 234707 1780165 ~ 1785389 (-)
sdf2l1 sdf2l1,LOC107704634,LOC107755844,LOC107668746 coding downstream 248304 1769436 ~ 1771792 (-)
top3b top3b,LOC107705001 coding downstream 274400 1733099 ~ 1745696 (-)
ppm1f ppm1f,LOC107599133,LOC107741489,LOC107755823,LOC107668739,LOC107704983 coding downstream 287959 1721233 ~ 1732137 (-)
LOC122344882 gnrhr4,LOC107715601,LOC107575089,LOC107690392,LOC107715190,LOC107691141 coding upstream 29783 2052705 ~ 2058733 (-)
LOC122346063 LOC107747844,LOC107554104,LOC107556635,LOC107667225 coding upstream 64863 2087785 ~ 2090156 (-)
LOC122345768 LOC107562125,LOC107690349,LOC107554462,LOC107715242 coding upstream 67230 2090152 ~ 2099181 (-)
LOC122346100 LOC107757959,LOC107587426,LOC107709681,LOC107681216,LOC107560221,LOC107560220 coding upstream 362229 2385151 ~ 2418053 (-)
purba LOC107737074,LOC107755849,LOC107668742,LOC107670383,LOC107599601,LOC108431741,LOC107580671 coding upstream 501637 2524559 ~ 2527337 (-)
G32682 LOC107551460,LOC107556260,LOC107715220,LOC107691117,LOC107714787,LOC107690391 non-coding downstream 19639 1999885 ~ 2000457 (-)
G32681 NA non-coding downstream 23253 1996276 ~ 1996843 (-)
G32675 NA non-coding downstream 53564 1966329 ~ 1966532 (-)
G32656 NA non-coding downstream 127021 1851228 ~ 1893075 (-)
G32654 NA non-coding downstream 137704 1848824 ~ 1882392 (-)
G32701 NA non-coding upstream 200423 2223345 ~ 2224056 (-)
G32703 NA non-coding upstream 220745 2243667 ~ 2243883 (-)
G32707 NA non-coding upstream 245898 2268820 ~ 2269330 (-)
LOC122346102 NA non-coding upstream 333044 2355966 ~ 2356780 (-)
G32727 LOC107681241 non-coding upstream 351080 2374002 ~ 2375663 (-)
G32676 NA other downstream 52348 1966637 ~ 1967748 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other downstream 325810 1673024 ~ 1694286 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other downstream 665682 1342606 ~ 1354414 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other downstream 683909 1312604 ~ 1336187 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other downstream 1388970 622514 ~ 631126 (-)
G32857 NA other upstream 473582 2496504 ~ 2554146 (-)
snrnp27 snrnp27 other upstream 557626 2580548 ~ 2585452 (-)
add2 add2,LOC107668755 other upstream 563665 2586587 ~ 2605917 (-)
LOC122344624 LOC107699921,LOC107708239,LOC107755860,LOC107697241,LOC107551809 other upstream 912821 2935743 ~ 3012819 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other upstream 928540 2951462 ~ 2960177 (-)

Expression


Co-expression Network