G32881


Basic Information

Item Value
gene id G32881
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 2749959 ~ 2797599 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU48421
TGGAggcaaaaagttttatttgaacTACACTTGAAATCCAAACAGATGTCTTCATCGAGCTGAAtaagagatgtgtgtgtgttttacctgaTCCAGTCGGGTCTGATGACAGGGAAACGAGAAGGTGAAGCCCAGCGGCAGCGACGCTCCCTTCATACCCATATACTCCAGGAAGTCAGCAATGCAGTGCACTATGTGATCGAATAACTGCGGAggacagttcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaggtgaagATAAAGGATCATGCATGCTTATCAAAACAAGCTCCAGCTTCCAGGATCATCACTGGAAACCATAAAGAGTGCAACAGAACATGTTACGCAGCAACAAGCGATTCCAGCCTAAAATACAGCACTAAGTATACAGCTGGAGGTGAGTGCACTTCATGCTCAAATACAGCGATTGCTTTATTTAGGAGCTCGCACAGTTCCTCTAGTGCACTTATCCTGCAATCCAAGACACACACTAACACCGAACACGAGGGCCGCCGTTACGCATGTTACGCCAGCTCAGTTGAGAAagcgaaaaaaaacaaaccaaaccaaaacaaaagaaaatcaaatcaaCATAATTTTTCCACTGCaatgtcatcatcatcatcatgcaAATGAACGGAATCCACCGCGCACCCGACCGGCATCCTGAATGGGTGTTAATGAAGTGGAGTGTGTTTGGAGGGCGTACCTCCTCGCCGGTGCCCTGAGTGATGTCTTGAGGGATGGTGTAGATCTTATTATGCATCTCCACGCTCCGTCTTTTCCCGCTTCCAACGCGCACCAACAGCACCCTGAAGTTTGTGCCGCCCAGATCCAGAGCCAAGAAGTCTCCACGCTCTGCAGAACATTCACAATAGATTCAGAGACTGGAACAactatctctctcacacacacacacacacacacacacacacacacaccaatcaACACTCTGGACTGTTCTGGAATGGTCTGGATATGGAGGAGCTATTGATTTGTCTCTCATACCAGTGAGGATatcacatatattattatttttttttgcattgggTTATGCAGTTTTAGTATATAGAGTACAGTACAGCTACATCAGTCACAATCTTCTGCATGTCCCTTGTGTTTTAGCTGACAACTGTCTTCAAAATCTGAGACGACAACTGAAACTGGATGTTACGAAAACTTGTTACGTACTATAAAAACCATACAAAGGATtacttacacacacacacacacacacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48421 True 1281 lncRNA 0.45 2 2749959 2797599

Neighbor

gene id symbol gene type direction distance location
LOC122345702 figla coding downstream 140374 2607214 ~ 2609585 (-)
mxd1 mxd1,LOC107670395,LOC107708253 coding downstream 170156 2555476 ~ 2579803 (-)
zgc:65851 zgc:65851,LOC107670379,LOC107708255,LOC107668750,LOC107599600,LOC107755851,LOC107573085 coding downstream 206385 2536025 ~ 2543574 (-)
purba LOC107737074,LOC107755849,LOC107668742,LOC107670383,LOC107599601,LOC108431741,LOC107580671 coding downstream 222622 2524559 ~ 2527337 (-)
LOC122346100 LOC107757959,LOC107587426,LOC107709681,LOC107681216,LOC107560221,LOC107560220 coding downstream 331906 2385151 ~ 2418053 (-)
tet3 LOC107654213,LOC107708251,LOC107557386,LOC107697244,LOC107551814,LOC107755856 coding upstream 26572 2824171 ~ 2866043 (-)
ap3m2 ap3m2,LOC107755857,LOC107551816 coding upstream 68566 2866165 ~ 2874893 (-)
kat6a kat6a,LOC107708249,LOC107697242,LOC107755858,LOC107699914,LOC107551817 coding upstream 78710 2876309 ~ 2910382 (-)
LOC122345463 sema4c,LOC107699920,LOC107697240 coding upstream 225250 3022849 ~ 3089522 (-)
gnb1l gnb1l,LOC107708243,LOC107755863,LOC107551810 coding upstream 545960 3343559 ~ 3376526 (-)
G32870 NA non-coding downstream 21152 2652444 ~ 2728807 (-)
LOC122346060 cacna1ba,LOC107560222,LOC107587427,LOC107709695 non-coding downstream 314259 2433286 ~ 2435700 (-)
G32740 cacna1ba,LOC107709695,LOC107757972,LOC107587427,LOC107681248,LOC107560222,LOC107690670 non-coding downstream 325147 2422985 ~ 2424812 (-)
LOC122344845 LOC107709689,LOC107560224,LOC107681222 non-coding downstream 365258 2383907 ~ 2384701 (-)
LOC122344860 LOC107560224,LOC107690695,LOC107757958,LOC107681222,LOC107709689,LOC107587469 non-coding downstream 370564 2377967 ~ 2379395 (-)
G32906 NA non-coding upstream 138882 2936481 ~ 2936938 (-)
LOC122346059 NA non-coding upstream 150885 2948484 ~ 2950332 (-)
G32910 NA non-coding upstream 185168 2982767 ~ 2984983 (-)
G32914 NA non-coding upstream 283308 3080907 ~ 3120371 (-)
G32922 NA non-coding upstream 378120 3175719 ~ 3176249 (-)
add2 add2,LOC107668755 other downstream 144042 2586587 ~ 2605917 (-)
snrnp27 snrnp27 other downstream 164507 2580548 ~ 2585452 (-)
G32857 NA other downstream 195813 2496504 ~ 2554146 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other downstream 727037 2020096 ~ 2022922 (-)
G32676 NA other downstream 782211 1966637 ~ 1967748 (-)
LOC122344624 LOC107699921,LOC107708239,LOC107755860,LOC107697241,LOC107551809 other upstream 138144 2935743 ~ 3012819 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other upstream 153863 2951462 ~ 2960177 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other upstream 947076 3744675 ~ 3752764 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other upstream 1081051 3878650 ~ 3898578 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other upstream 1347257 4144856 ~ 4193081 (-)

Expression


Co-expression Network