G32906


Basic Information

Item Value
gene id G32906
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 2936481 ~ 2936938 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU48461
GCCAGATGCGTTAGAACTAGCGGTGTGTTTTCATGTCACGCAGTAcacctacaaaaaaaaccctaaacatTTGTCTTAATGTCTTAAACATTAAAGGCCGTTAAAAGAAGTTTGTTTTTAAGTATAATCCAGGTGGTTTGGGGTTTCCCTCAGAGCGGAAGAACACCGCCGTTTTAACTCGCGAGCTCTTATCTTATGTCCTGGACTCGAGAATGGAGGTCACC

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0022402 cell cycle process biological_process
GO:0022607 cellular component assembly biological_process
GO:0010948 negative regulation of cell cycle process biological_process
GO:0006996 organelle organization biological_process
GO:0044770 cell cycle phase transition biological_process
GO:0051225 spindle assembly biological_process
GO:0007017 microtubule-based process biological_process
GO:0007049 cell cycle biological_process
GO:0007051 spindle organization biological_process
GO:0070925 organelle assembly biological_process
GO:0000226 microtubule cytoskeleton organization biological_process
GO:1901988 negative regulation of cell cycle phase transition biological_process
GO:1901991 negative regulation of mitotic cell cycle phase transition biological_process
GO:0005634 nucleus cellular_component
GO:0043226 organelle cellular_component
GO:0043229 intracellular organelle cellular_component

KEGG:

id description
ko00240 Pyrimidine metabolism
ko03030 DNA replication
ko03410 Base excision repair
ko03440 Homologous recombination
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU48461 True 224 lncRNA 0.43 2 2936481 2936938

Neighbor

gene id symbol gene type direction distance location
kat6a kat6a,LOC107708249,LOC107697242,LOC107755858,LOC107699914,LOC107551817 coding downstream 26099 2876309 ~ 2910382 (-)
ap3m2 ap3m2,LOC107755857,LOC107551816 coding downstream 61588 2866165 ~ 2874893 (-)
tet3 LOC107654213,LOC107708251,LOC107557386,LOC107697244,LOC107551814,LOC107755856 coding downstream 70438 2824171 ~ 2866043 (-)
LOC122345702 figla coding downstream 326896 2607214 ~ 2609585 (-)
mxd1 mxd1,LOC107670395,LOC107708253 coding downstream 356678 2555476 ~ 2579803 (-)
LOC122345463 sema4c,LOC107699920,LOC107697240 coding upstream 85911 3022849 ~ 3089522 (-)
gnb1l gnb1l,LOC107708243,LOC107755863,LOC107551810 coding upstream 406621 3343559 ~ 3376526 (-)
txnrd2.2 txnrd2 coding upstream 454056 3390994 ~ 3417741 (-)
taok3a taok3,taok3a,LOC107699916,LOC107697236,LOC107708246 coding upstream 485946 3422884 ~ 3494193 (-)
si:dkey-1k23.3 LOC107560961,LOC107656799,LOC107702214,LOC107755870 coding upstream 682240 3619178 ~ 3622404 (-)
G32881 NA non-coding downstream 138882 2749959 ~ 2797599 (-)
G32883 NA non-coding downstream 162291 2767779 ~ 2774190 (-)
G32884 NA non-coding downstream 166110 2769201 ~ 2770371 (-)
G32882 NA non-coding downstream 169710 2765283 ~ 2766771 (-)
G32870 NA non-coding downstream 207674 2652444 ~ 2728807 (-)
LOC122346059 NA non-coding upstream 11546 2948484 ~ 2950332 (-)
G32910 NA non-coding upstream 45829 2982767 ~ 2984983 (-)
G32914 NA non-coding upstream 143969 3080907 ~ 3120371 (-)
G32922 NA non-coding upstream 238781 3175719 ~ 3176249 (-)
G32999 NA non-coding upstream 356668 3293606 ~ 3327241 (-)
add2 add2,LOC107668755 other downstream 330564 2586587 ~ 2605917 (-)
snrnp27 snrnp27 other downstream 351029 2580548 ~ 2585452 (-)
G32857 NA other downstream 382335 2496504 ~ 2554146 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other downstream 913559 2020096 ~ 2022922 (-)
G32676 NA other downstream 968733 1966637 ~ 1967748 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other upstream 14524 2951462 ~ 2960177 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other upstream 807737 3744675 ~ 3752764 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other upstream 941712 3878650 ~ 3898578 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other upstream 1207918 4144856 ~ 4193081 (-)
G33175 NA other upstream 1685552 4622490 ~ 4623058 (-)

Expression


Co-expression Network