G33079


Basic Information

Item Value
gene id G33079
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 4336372 ~ 4337998 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU48705
TCGACGACATCGAGTGGTCCAAGTCTCCCAAAGACACCTTCACCTTGGCTGATGGGACCGTCACCACGTTTGTGGATTACTACAGGAAGAACTATGGCATCGCCGTAAAGGAGCTGGACCAACCGCTGCTCATCCATCGTCCCAAAGAGAGGTCCAGACCTGGAGGAAAGGTCATGGCGGGTGAAATCCTGCTGCTCGGAGCTCTCCTTCATGACCGGCATCCCCGAGAAGATGAGGAAGGACTTCAGAGCCATGAGGGATCTGACCGTGCACATCAACGTGGGAGCCGAGCAGCACACCCGGAGCCTCAAGCAGCTGCTGCACAACATCAACAGCAGTAACGAAGCGCTCTCAGAGCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48705 True 361 lncRNA 0.57 4 4336372 4337998

Neighbor

gene id symbol gene type direction distance location
LOC122345408 htr7c,LOC107707833,LOC107656814,LOC107561270,LOC107560967,LOC102292089 coding upstream 395397 3903978 ~ 3940975 (+)
znrf3 znrf3,LOC107707852,LOC107656810,LOC107560969,LOC107755873,LOC107702225 coding upstream 588464 3677588 ~ 3747908 (+)
LOC122345442 NA coding upstream 685669 3623142 ~ 3650703 (+)
hspb8 hspb8,LOC107720866 coding upstream 717317 3610472 ~ 3619055 (+)
suds3 suds3,LOC107569732,LOC107708245 coding upstream 831169 3497249 ~ 3505203 (+)
LOC122344976 htr7c,LOC107707833,LOC107656814,LOC107561270,LOC107560967,LOC102292089 coding downstream 37805 4375803 ~ 4409270 (+)
chfr chfr,LOC107656818,LOC107548943,LOC107600128,LOC107672629 coding downstream 575331 4913329 ~ 4928533 (+)
ascc2 ascc2,LOC107707848,LOC107741258,LOC107600125,LOC107548944 coding downstream 664010 5002008 ~ 5008609 (+)
LOC122346032 hira,LOC107741257,LOC107707818,LOC107672596 coding downstream 676115 5014113 ~ 5026429 (+)
pgam5 pgam5,LOC107597303,LOC107684980,LOC107595915,LOC107672628 coding downstream 1055801 5393799 ~ 5398332 (+)
G33077 NA non-coding upstream 6776 4328198 ~ 4329596 (+)
LOC122345412 NA non-coding upstream 53435 4256178 ~ 4282937 (+)
G33018 xbp1 non-coding upstream 673443 3659867 ~ 3662929 (+)
LOC122346010 NA non-coding upstream 683528 3651409 ~ 3652844 (+)
G32992 NA non-coding upstream 829662 3505648 ~ 3506710 (+)
G33167 NA non-coding downstream 254598 4592596 ~ 4592852 (+)
G33182 NA non-coding downstream 565130 4903128 ~ 4903374 (+)
G33251 NA non-coding downstream 998351 5336349 ~ 5336636 (+)
G33257 NA non-coding downstream 1030436 5368434 ~ 5370521 (+)
G33206 ankle2,LOC107729791,LOC107597302,LOC107672626,LOC107741250,LOC107684979,LOC107595914 non-coding downstream 1063317 5401315 ~ 5402784 (+)
G33015 NA other upstream 191976 3605186 ~ 4144396 (+)
tbx1 tbx1,LOC107755862,LOC107699917,LOC107708247 other upstream 993302 3328800 ~ 3343070 (+)
LOC122345783 npffr1l2,LOC107755826,LOC107599640,LOC107668729,LOC107708240,LOC107654224 other upstream 1687011 2627084 ~ 2649361 (+)
G32706 LOC107560224,LOC107681222,LOC107709689,LOC107690695,LOC107757958,LOC107587469 other upstream 2068178 2265145 ~ 2268194 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other upstream 2317222 2010217 ~ 2019150 (+)
G33174 NA other downstream 284509 4622507 ~ 4623060 (+)
fbrsl1 LOC107656817,LOC107600129 other downstream 306103 4644101 ~ 4902403 (+)
G33355 kctd10,LOC107595924,LOC106564472,LOC107672630,LOC107597295,LOC107752136 other downstream 1266335 5604333 ~ 5649885 (+)
myo1ha myo1ha,myo1h,LOC106585663 other downstream 1287269 5625267 ~ 5648047 (+)
tnpo1 tnpo1,LOC107700926,LOC107655929,LOC107596175 other downstream 1621834 5959832 ~ 5982816 (+)

Expression


Co-expression Network