G33206 (ankle2,LOC107729791,LOC107597302,LOC107672626,LOC107741250,LOC107684979,LOC107595914)


Basic Information

Item Value
gene id G33206
gene name ankle2,LOC107729791,LOC107597302,LOC107672626,LOC107741250,LOC107684979,LOC107595914
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5401315 ~ 5402784 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU48915
TTTGCATTTCTAAGTGGGAGTATGCCTGAATTGTGCTCTTCCATTTGTGAATGCCAGGATACTTCAGAGAGTCAATGTCTGCGCCTCCTAAAGCTGACAGAACCTCTCGGTCCAACTTGGTGGGCGAATCCCCTTCGATGAAGAGTCTTTTCGTCGCTCTGGGAGGAGTGCGCAGTATAAAGTCCTGAGAACCGTCAAGTGATCTGTAGGAGCCGGAAGACCCTGAGGAGCTGAGATCTCTTCCCCCGTGATCCCAGGACTTTGACCTAGCGCAGATTGCACGCTCGCCTCCTGGAGTCTCTATAGTCCGTTGGTTCGCAGGTTCCAACCTCTCGCTGGCCAGAAAGTATTCATCCGAACTTGCACTGGACCTCGCGTCGATTTCGTTTCTTCTCTCCGATCCATCATTCTCCACTGCCCTTAACGCAGACGTCCTGTCTTTATCAAACACCAAGTCGTCTTCCGAGGATAAAGAGAGACGGCCCAGTCCGGAGGTGAGCTCGGCGGCCGGGGGGTCTCGGTGACGTTTCCCTCCGCTTCTTCTTCTCTCCCTGTTCGTCCGATCTGGCTCGTCCAGCAGAGACATCCTCTCAAACTCAGCCATGAGGTTTGAGATCGGCGACAGAATGCAGGAATTTGATGAACTGCAAATGCGAGGGGACATTTTGTCCCCGTTTGGAGTCCTGTCCCCAGGGCCCTGCTCGCACAGGCCGTTTTTACTGCTGGAGAGCAGCAGATCCTGCTCCGCCGCCACCTCGATGAGGTCAGCGCTGTGGGAAACCGGGAGGATGTGAAACTCAAGCCCCCCTACCGCCCCTTGCAGGCCGTCTTTGGAGCACACCGAAGAAATGCTGGTGAGGGCGGCGTTCTGCCTGTTTTTGATCTCCTCCAGGCTGATATCGTCGCCCTCGTCCAAAAATGCCCCCACAGAAATGGAGTTACAGAACTTCTTCAGTT

Function

symbol description
ankle2 Predicted to enable protein phosphatase 2A binding activity. Predicted to be involved in negative regulation of phosphorylation and positive regulation of protein dephosphorylation. Predicted to act upstream of or within cell division and mitotic nuclear membrane reassembly. Predicted to be active in endoplasmic reticulum. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly 16. Orthologous to human ANKLE2 (ankyrin repeat and LEM domain containing 2).

NR:

description
PREDICTED: ankyrin repeat and LEM domain-containing protein 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48915 True 957 lncRNA 0.55 2 5401315 5402784

Neighbor

gene id symbol gene type direction distance location
pgam5 pgam5,LOC107597303,LOC107684980,LOC107595915,LOC107672628 coding upstream 2983 5393799 ~ 5398332 (+)
LOC122346032 hira,LOC107741257,LOC107707818,LOC107672596 coding upstream 374886 5014113 ~ 5026429 (+)
ascc2 ascc2,LOC107707848,LOC107741258,LOC107600125,LOC107548944 coding upstream 392706 5002008 ~ 5008609 (+)
chfr chfr,LOC107656818,LOC107548943,LOC107600128,LOC107672629 coding upstream 472782 4913329 ~ 4928533 (+)
LOC122344976 htr7c,LOC107707833,LOC107656814,LOC107561270,LOC107560967,LOC102292089 coding upstream 992045 4375803 ~ 4409270 (+)
LOC122346030 LOC107684986,LOC107741279,LOC107597300,LOC107672622,LOC107595956,LOC100535393 coding downstream 100524 5503308 ~ 5547584 (+)
atp8b5a LOC107684987,LOC107741246,LOC107672607,LOC107595921,LOC105889921 coding downstream 146053 5548837 ~ 5570088 (+)
rusc2 rusc2,LOC107752133,LOC107684988,LOC107741245,LOC107595920,LOC107672606,LOC107597340 coding downstream 169527 5572311 ~ 5593179 (+)
acacb NA coding downstream 192311 5595095 ~ 5620700 (+)
ube3b ube3b,LOC107654616,LOC107752137,LOC107597296,LOC107595925,LOC107741240,LOC107672623 coding downstream 250791 5653575 ~ 5666827 (+)
G33257 NA non-coding upstream 30794 5368434 ~ 5370521 (+)
G33251 NA non-coding upstream 64679 5336349 ~ 5336636 (+)
G33182 NA non-coding upstream 497941 4903128 ~ 4903374 (+)
G33167 NA non-coding upstream 808463 4592596 ~ 4592852 (+)
G33079 NA non-coding upstream 1063317 4336372 ~ 4337998 (+)
LOC122346031 NA non-coding downstream 53313 5456097 ~ 5468031 (+)
G33348 NA non-coding downstream 66288 5469072 ~ 5539398 (+)
G33454 NA non-coding downstream 414636 5817420 ~ 5870510 (+)
G33453 NA non-coding downstream 456506 5859290 ~ 5880529 (+)
G33471 NA non-coding downstream 460548 5863332 ~ 5897366 (+)
fbrsl1 LOC107656817,LOC107600129 other upstream 498912 4644101 ~ 4902403 (+)
G33174 NA other upstream 778255 4622507 ~ 4623060 (+)
G33015 NA other upstream 1256919 3605186 ~ 4144396 (+)
tbx1 tbx1,LOC107755862,LOC107699917,LOC107708247 other upstream 2058245 3328800 ~ 3343070 (+)
LOC122345783 npffr1l2,LOC107755826,LOC107599640,LOC107668729,LOC107708240,LOC107654224 other upstream 2751954 2627084 ~ 2649361 (+)
G33355 kctd10,LOC107595924,LOC106564472,LOC107672630,LOC107597295,LOC107752136 other downstream 201549 5604333 ~ 5649885 (+)
myo1ha myo1ha,myo1h,LOC106585663 other downstream 222483 5625267 ~ 5648047 (+)
tnpo1 tnpo1,LOC107700926,LOC107655929,LOC107596175 other downstream 557048 5959832 ~ 5982816 (+)
G33494 foxd1,LOC107598200,LOC107718663,LOC107700903,LOC107596217,LOC107757501 other downstream 684478 6087262 ~ 6088562 (+)
hexb hexb,LOC107718643,LOC107700931,LOC107655935,LOC107570862 other downstream 845011 6247795 ~ 6255340 (+)

Expression


Co-expression Network