G33355 (kctd10,LOC107595924,LOC106564472,LOC107672630,LOC107597295,LOC107752136)


Basic Information

Item Value
gene id G33355
gene name kctd10,LOC107595924,LOC106564472,LOC107672630,LOC107597295,LOC107752136
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5604333 ~ 5649885 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU49128
attttttttttttttttttttttTTTGATCTACAAATTTATTTGTGATAAcgcgtgtataaataatttgtatgtaaaacattttattcatgtgcACGTCTGTACAAACCTCTCTACAGTATTATAGATTtcataggtttttttttgttgttgttgtttaaatacacctttaataaaacaatcaatCGCAAACCATCTGTGACGCTGCAGCTGAGGAGAGCCCATACTCTCGTGCATCTCTGACGTGGTCCGGTCTCCGATTACACTCATACTTGGTGTCCATTTCCCAATTACAGATATACATCCGAACGCTTCTGACTGCATCTCAGTTTCTTTGCTTGAACGAGATCCCTTACAGAACCACAGAAGCGTAATTAACTTGATGGAATTTAATACAGCGCAGCAGAAAGGTATTTAATAGCATAATCTATTTTACTGATTGTGGCCAAAAGGGGATAGAAAATGACAATTACTGCTTGAAAAGTGCCTCCTCATGTATGTGAGAGAAAACGGCGTAACATTACACTGCCCTCTATTGGCCAAACTCATACAGACCTGCCAAAAAAAATCCAGCACATTCAATCTTCAAGCGTGCATAAGTGTTTTTGCGCAAgcacaataaaatgaatatagaCAGATTCGGACACTCTGCTCTAATGAGTATAGTAATAGGGTAATTACGGATTGAATTCTTCTCATAAGGCAATAATAATATCCTCCTTCACTGATCACTTGTCTGCCAAACCACACCGACATTTTCAAGATAGCTTCAACTTCCTGaatctcacacacgcacactagCAGCGCTGTGCAATCCTGGCTCTAACACTTCAAAGCAAACTAAAACGAGAAGAAAAAGAGTAAACTAAACTCaaaagacacaaaaactcaATGTCTTTcacagaatacacacacacaaaaaaaagaacagaattaatCTATAAGGCACCAGAAACCCTACAGTCTTcactcaaacaaacaatatgGTAAATAACATAGTACAAAAATACTACGGCAGGCAACTAAACTTGTAAGATATCCATTGGCTGCAAAcctataataaaaacaacagtttagCTGATCGACTTGATATGTTTCGTTGGAATTCGATTCATGAATAGCAAACAGGGCGACAAGTTCAGGGAATGTCTTAAATGCAGTAAAGCCGTCTGTTGCGCATTTCTCATTTACACCGTGATGGTATCTTTTTAGCGGGGTCCTTGAAAATGCACAGCTGACGTTCGAGACCAATGTCGCACTGCCCTATATGCTACGGTCGTGTAACATTATCAATACTAGCCGTTCTGCGAGCATCCCTTTGTCTCTACGGAAACGGACTCGGGATAAACCTAAGTGACGTGTCCGTGTGCAAACAGAGGAGCGTAACCGAAGCGCTGGTAGTCGTTAAGGCACTGGATAGATGGGAAACGGCGGGGTCACTGGTGGTGGTGAGTGCGGTCATCGGGGCGCTTGATGTGGATCCGCCGCACTCTTTCAATGCGCTCCCTCTCTTCGTCCTCGTCGATGTGGTGGGAGCGCCCCGCAGCGCCCCCTGTGGCCTCCAGCAGTGCATTGTCAGGTCCACGGCCATCTTGAGACTCGTAGAGCAAGATGTTGAGGGTCTCTTCATAGATGCGAGCCTCTGGGAACTCGAC
>TU49131
atttttttttttttttttttttttttGTTTGATCTACAAATTTATTTGTGATAAcgcgtgtataaataatttgtatgtaaaacattttattcatgtgcACGTCTGTACAAACCTCTCTACAGTATTATAGATTtcataggtttttttttgttgttgttgtttaaatacacctttaataaaacaatcaatCGCAAACCATCTGTGACGCTGCAGCTGAGGAGAGCCCATACTCTCGTGCATCTCTGACGTGGTCCGGTCTCCGATTACACTCATACTTGGTGTCCATTTCCCAATTACAGATATACATCCGAACGCTTCTGACTGCATCTCAGTTTCTTTGCTTGAACGAGATCCCTTACAGAACCACAGAAGCGTAATTAACTTGATGGAATTTAATACAGCGCAGCAGAAAGGTATTTAATAGCATAATCTATTTTACTGATTGTGGCCAAAAGGGGATAGAAAATGACAATTACTGCTTGAAAAGTGCCTCCTCATGTATGTGAGAGAAAACGGCGTAACATTACACTGCCCTCTATTGGCCAAACTCATACAGACCTGCCAAAAAAAATCCAGCACATTCAATCTTCAAGCGTGCATAAGTGTTTTTGCGCAAgcacaataaaatgaatatagaCAGATTCGGACACTCTGCTCTAATGAGTATAGTAATAGGGTAATTACGGATTGAATTCTTCTCATAAGGCAATAATAATATCCTCCTTCACTGATCACTTGTCTGCCAAACCACACCGACATTTTCAAGATAGCTTCAACTTCCTGaatctcacacacgcacactagCAGCGCTGTGCAATCCTGGCTCTAACACTTCAAAGCAAACTAAAACGAGAAGAAAAAGAGTAAACTAAACTCaaaagacacaaaaactcaATGTCTTTcacagaatacacacacacaaaaaaaagaacagaattaatCTATAAGGCACCAGAAACCCTACAGTCTTcactcaaacaaacaatatgGTAAATAACATAGTACAAAAATACTACGGCAGGCAACTAAACTTGTAAGATATCCATTGGCTGCAAAcctataataaaaacaacagtttagCTGATCGACTTGATATGTTTCGTTGGAATTCGATTCATGAATAGCAAACAGGGCGACAAGTTCAGGGAATGTCTTAAATGCAGTAAAGCCGTCTGTTGCGCATTTCTCATTTACACCGTGATGGTATCTTTTTAGCGGGGTCCTTGAAAATGCACAGCTGACGTTCGAGACCAATGTCGCACTGCCCTATATGCTACGGTCGTGTAACATTATCAATACTAGCCGTTCTGCGAGCATCCCTTTGTCTCTACGGAAACGGACTCGGGATAAACCTAAGTGACGTGTCCGTGTGCAAACAGAGGAGCGTAACCGAAGCGCTGGTAGTCGTTAAGGCACTGGATAGATGGGAAACGGCGGGGTCACTGGTGGTGGTGAGTGCGGTCATCGGGGCGCTTGATGTGGATCCGCCGCACTCTTTCAATGCGCTCCCTCTCTTCGTCCTCGTCGATGTGGTGGGAGCGCCCCGCAGCGCCCCCTGTGGCCTCCAGCAGTGCATTGTCAGGTCCACGGCCATCTTGAGACTCGTAGAGCAAGATGTTGAGGGTCTCTTCATAGATGCGAGCCTCTGGGAACTCGAC

Function

symbol description
kctd10 Enables transcription corepressor activity. Acts upstream of or within circulatory system development; pectoral fin development; and regulation of macromolecule biosynthetic process. Predicted to be part of Cul3-RING ubiquitin ligase complex. Is expressed in several structures, including brain; fin; head; pericardial region; and pleuroperitoneal region. Orthologous to human KCTD10 (potassium channel tetramerization domain containing 10).

NR:

description
PREDICTED: BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49128 False 1654 TUCP 0.42 2 5604333 5649885
TU49131 True 1658 TUCP 0.42 2 5604333 5649885

Neighbor

gene id symbol gene type direction distance location
rusc2 rusc2,LOC107752133,LOC107684988,LOC107741245,LOC107595920,LOC107672606,LOC107597340 coding upstream 11154 5572311 ~ 5593179 (+)
atp8b5a LOC107684987,LOC107741246,LOC107672607,LOC107595921,LOC105889921 coding upstream 34245 5548837 ~ 5570088 (+)
LOC122346030 LOC107684986,LOC107741279,LOC107597300,LOC107672622,LOC107595956,LOC100535393 coding upstream 56749 5503308 ~ 5547584 (+)
pgam5 pgam5,LOC107597303,LOC107684980,LOC107595915,LOC107672628 coding upstream 206001 5393799 ~ 5398332 (+)
LOC122346032 hira,LOC107741257,LOC107707818,LOC107672596 coding upstream 577904 5014113 ~ 5026429 (+)
ube3b ube3b,LOC107654616,LOC107752137,LOC107597296,LOC107595925,LOC107741240,LOC107672623 coding downstream 3690 5653575 ~ 5666827 (+)
mvk LOC107741241,LOC107672634,LOC107654617 coding downstream 21400 5671285 ~ 5679031 (+)
fam222a fam222a,LOC107752139,LOC107654618,LOC107597290,LOC107741239,LOC107672614,LOC107597291,LOC107580258 coding downstream 98233 5748118 ~ 5804954 (+)
LOC122346201 tchp,LOC107741236,LOC107752150,LOC107595960 coding downstream 202081 5851966 ~ 5857677 (+)
ankrd13a ankrd13a,LOC107595961,LOC107597335 coding downstream 235036 5884921 ~ 5894400 (+)
G33348 NA non-coding upstream 64935 5469072 ~ 5539398 (+)
LOC122346031 NA non-coding upstream 136302 5456097 ~ 5468031 (+)
G33206 ankle2,LOC107729791,LOC107597302,LOC107672626,LOC107741250,LOC107684979,LOC107595914 non-coding upstream 201549 5401315 ~ 5402784 (+)
G33257 NA non-coding upstream 233812 5368434 ~ 5370521 (+)
G33251 NA non-coding upstream 267697 5336349 ~ 5336636 (+)
G33454 NA non-coding downstream 167535 5817420 ~ 5870510 (+)
G33453 NA non-coding downstream 209405 5859290 ~ 5880529 (+)
G33471 NA non-coding downstream 213447 5863332 ~ 5897366 (+)
G33492 NA non-coding downstream 429198 6079083 ~ 6079423 (+)
G33499 NA non-coding downstream 475445 6125330 ~ 6165323 (+)
fbrsl1 LOC107656817,LOC107600129 other upstream 701930 4644101 ~ 4902403 (+)
G33174 NA other upstream 981273 4622507 ~ 4623060 (+)
G33015 NA other upstream 1459937 3605186 ~ 4144396 (+)
tbx1 tbx1,LOC107755862,LOC107699917,LOC107708247 other upstream 2261263 3328800 ~ 3343070 (+)
LOC122345783 npffr1l2,LOC107755826,LOC107599640,LOC107668729,LOC107708240,LOC107654224 other upstream 2954972 2627084 ~ 2649361 (+)
tnpo1 tnpo1,LOC107700926,LOC107655929,LOC107596175 other downstream 309947 5959832 ~ 5982816 (+)
G33494 foxd1,LOC107598200,LOC107718663,LOC107700903,LOC107596217,LOC107757501 other downstream 437377 6087262 ~ 6088562 (+)
hexb hexb,LOC107718643,LOC107700931,LOC107655935,LOC107570862 other downstream 597910 6247795 ~ 6255340 (+)
G33664 NA other downstream 823462 6473347 ~ 6491986 (+)
dab2ipb dab2ipb,LOC107693836,LOC107710761,LOC107700936,LOC107726296 other downstream 967391 6617276 ~ 6762808 (+)

Expression


Co-expression Network