G33446


Basic Information

Item Value
gene id G33446
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5679683 ~ 5684284 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU49258
ggttttattgtttttggggTCACAGTATTCGGCCAATAGCAAAAAAGCTGGATagatggccaatcagagcacaccttgcttcaccaaaccaaaataaaatctatgCATTTCAGAGAGGAAGGGTTTAGAGAAGCAACAATACTGTACAGTATGGTGAAAATAATGAGCGTTTGGAACCCATTGGAACACactgcattacaccaaatacacaaaataatgtagttgtttttctgcaacatcatatgaccacTTTATTTCTgtaaggatttaaaaaaaaaaaaaaaaaaaaagttagccaTAAACCGAACAACCAGCTACTAGGTGAATCGCAGaatcacaaagaaaaataaaaaattataaagattTGGTTCAACAGTGGCGCCGTTTGCTTTCTTTGTAGAATCACATTGTAGCCTTTCACCTGGAATTCCGCTATTAAAcaggattatttaaaaaattaataaataatgtagacTGACAGCTTTAACAAAAGCATATAACACTGATTAACAAGCTCACAATAGCTCTATTTTCAGAGGTTTAAGTTATTGTCAAAAATCAATTCCACTCAATTAAAGTTACTGCCCGTCAAGTGCATTCCGAATCAGTGGCATATAAAGTTTGATTACAGTTAAGATGCCGTCTGCGCAGGGCAGCtcgctaggttttggaacagagcttcAAACAGCAACAAAATCTCTCCGTGTTCTGGGAAGGTTCTTTactttgtgtgtgcgtgtttctgTTCAGAGCAGGTAAAGGTGCCCTTCCCCGACACCCTCCGCTCTCAACTGCTTCGATTTGCTCCGAGAGATTTTCTGAGGAGAGTCTGACAGGCTTCATGCTCCGAGCGCTAGCCAAGCAGAGATGAGCGCTGCTATAAAAATCAATGAAGCTCTTCAAAACCTACAGTACAACAAAAGCATTACTCTGCAATTAGATCTGTAGACGTGAGCAACCAAACACTACACTTAGTAAAGTtcagatattttatattgtaaaatcaatacggtatatatatatatacacagtagcACTGGCATAATAAAGAATGTTATGCAATTTCTGCTCTGTAGAGCAAGAAAACAAGGACTGTTGCGTTCGGAGTATCAGATGAAATATCATAGTATTCTTGGGAGTGCCACAACCATGAAACGGTAAATATGATTCACATTTCGTGtacgtttcattttttttcccatggaAAAGTGCacagtttaagtttaaatatgtatgaaaaGGGTTCTTCGGTCACCCCATTAATATGAGGTTATAAAAGTTGCAAGCATACTTATAAAAGGATGATCAAAATTACGCTTAAACTAGTATTAAATTCACACCGCAGGATTCCCAACAACTCAAATACCATTTAATTACGGTTTTATATTCATGTACTATGGTGTTACCGCAAAGAAAACCATGACATTATTATGATGTTGTGATGgaacgtttttgtttgtgaaaaaaGATCTTCAATTACAAATGCTATTAACATACTACACAGAATCATTCATCATTGAACTGAGATGCTTTCGCCGAGACCGCGAATAACAATGATATTGGTTCAAATGTGCTCATTCATCAAGACAGGACCTTAAGTGAATTCATCAACCTGAAGTGTCTATAAGACGCTGAAGTCTTGTGTTCTCACCGATTTATCCTACCTATTCATGTTCCCGCACAAGgacttcttttctctctctctctcacacacacacacacacaaacacgcttcATCCTCTCGACATGTGCAGGTCTGTGCCAGATTCTTCTGCAGTCGACAGCCTTAATGGGGTCAGCTGACCTCTGCTCTCACTTCTCACCAGGGCCAGGCAGAAGGGGAATGCCTTTCTCCACTCTGAAAGACACACAAACTCCCACACATACTCTCATTTTACACCACCTTGACCCTGACCCTTGCAGCATCTCCTCAAGAGGAGCAGAGAAAAGAGCCCTGCTCAGCTGCAGAGCCACGAGCTCTTGAAGGAAGGTGAGAGGTCACCGGTGGGCAAGACCAAAGCCTCCTCGAGAATTGGAATCGCACCAGGCTCCACCGTGAAATATCACCAGCCTCGATTTTGCTAAAGTTGCTAGGGTTAAAAATCAATAAGTCTAATGAACTAGAGGGGAACGGAGAGGAAAAAGGAAACCAAAGAGGAAAATGCCAGGAAGGAGAAAAGCgattgaaaggaaaaaaaggagagaaaatacAAAAGGAAATGGAAATTACGGAACAGGGGAAAGGAAAGGAAGACAAAATATGAAAAGGAAAAGGGGATAATAGAGCAGGAATAAAGGCAAAATATGAAAACGAAATATGAAAGTAATAGAgcaagaaagaataaaaaaggaaatgaaagaagaataaaaaaatgaaatattggaAAAGAAGGGGATGGAGGTGGAAAGGAAAGAcgaaaatgactaaaacattaaaagcaaaggaaagaatgaaataaattggAATAGAAAGGGAACAGAAgagggaaaaagaaaatatgaaacagaGGAAAAATAAGAGGAAAGAGGAATTGGAAAAGGAAATGGGAAGgatcagaaaatgaaaataaaaacaatgaaacaacaggacagaaaaaagaaatgaaaagtatCAGAacggagaaaaagaaaacatgaagaGGAAAAGCGAAGGAGGAGGAAGcaacaataaaagaaagaaaaggagtagaaaaagagaaagataggCAAGATGACAGGACAggaaaagtaaaagaaaaggATGCAAATTAATGGAAAGAGGAAAGGACGGTAACATAAAGAGAGGTGATGAATGTTGCTTTCCCTGTAAAAGTGCGATGAAAGGTGAAGCCTGCTGAGAAAACACTCACAGCTGGCCAGTCGCTGGCTTTTATCTGCGCCACTCTCACAAAAAGGACATGCTGCCAGCGTGCTCTTCTGCCATGATCTGTTTACAAGAGTGTCACACAGACCAACGCAGAGTTCATATCTATCACGCTCAGTGTCACATCCCTGCAGAGAATGAGTCACAACAGCACCAGAGAAAAgaggaataaaaacacaacatttactCATTACTTGAACTGTCACTCTTGAACTTCCGTTAAAACGAACGCGCGGGAGACGGGAGACGGCCTCGGCTGGCGACAGGCTAACGGAATAAAGGAGGGGAAAAGGCCTGAAGTCgcgttttattatatttcaatagCTCTGCCGCTTCCCTCCATCCTTGACCCCTTTTCTCGGCTGCCTCTGTTATCTGAAATAATGTCAGGCCATCCTTAGAATCTATTCATCAGCGCAGAAAGAAGCTGCGGCTGACATTGATAAAAAATACCATCTGTGCCTCGCAGGGAGGAGAGACGGAGAGGTACGGCTcgcccctcctcctcctcattcCTCTTCATCAATGCAATTTAAATTGAAGAGCTCAGCGGTAATTAAATTCAAGCTGGGGTTACGGCGGGGGCCGAAGGCGCAGATTCGACACGACAGAGAGAGGACGCCACACCGAGGGTCAAGGTTCAACCGAAGGCAGCCAGTTCCCATTCATTCAAACAACCTGTCTGCACAAAAGCCTTctgacatttaaagaaatgaataaaaacaacgaacgaaaggaggaaaaaaaaaaataaaatcaaaaaaatcaattattccACATTTTTCTCCTCCCTCCACAAACTGACCTTTTCTCTCTAACATCCTCTGCCAGCTGTTTGTTGGACAGACTTCAAAACTGCCAATAGTGTTTAACTCGTAGCCCGCCCTATCGAGGGGCTCTCTCGCGTTCGGGAAACGGGAGGAGGAAAAGTCGATAACCGTTTGAGGGATCCGTTTTTGTGGAATTGTTTGTCAGCACAAACACGAGGCGCATGACTAGCGGCAGGTCAGGGGGATTTCGGCGGACCGGGGGGGGGGCGGTCTCGGGGCCCCCCTCTTCTGGTTAAAGCCAGCTTTACTCACTCATCTGTTCTCCCTCGAACGGCCGCCGCGGCCCTCTCCTCCCTCCGCTAATCCGGTTACCGCATTCACAGGCAGCACCCTCTCTCTTTTCATTACAGCAGATCAGAGATTGAAAAGCGATTCCTCAATCTGTCCGAGGACGAGATCCAAATTGGATCGGGCCAAAGCGAATGCGGCAGAGACGGGGAAAACGGGAAGGGAAGATGACGCGACTCATTTTTACCCTTTAGAGCCGATTGCATGGGGAAAAAGCAATGTTCATAGAGTTTGTGTACGGGTAGGTGGCCTGTGATTGACAAGAGGACAACGGCTCACTTCGGAGCTATGAGGTCACTTCCTTAGTGTGCCGCGATTGCTCCCTCTTAAAATGTCGACGCACTCCAAAGGCTTCGAACTGCTACAAAGAAAGCTGGAGGTTATTTATTTGAACGGTTTTGAAAAATGCCTCATCAAGGCATTAGTTCGATCGAAAACGGTAATACCAATAGCACCGCGAATtgcttaatatgttttaaaatcaaatacatttttgcgaCGGCAAAGCAGAATTTCGCAGCTGCTttagtgtcatatgatccttcggGAATCATTTTAATACGCTAATTTGGCgcttaaacgtttttttttttaaatagcttaaaaCACCACAAATGCACT

Function

GO: NA

KEGG:

id description
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU49258 True 4602 lncRNA 0.42 1 5679683 5684284

Neighbor

gene id symbol gene type direction distance location
mmab LOC107752154,LOC107597358,LOC107654603,LOC107672637,LOC107741242,LOC107595926 coding downstream 8554 5668793 ~ 5671129 (-)
kctd10 kctd10,LOC107597295,LOC107595924,LOC107672630,LOC107752136 coding downstream 26654 5648255 ~ 5653029 (-)
foxn4 foxn4,LOC107654613 coding downstream 50397 5621069 ~ 5629286 (-)
LOC122345133 LOC107752131,LOC107684984,LOC107595918,LOC107672624,LOC107741247 coding downstream 224927 5435977 ~ 5454756 (-)
ranbp1 ranbp1,LOC107684983,LOC107752129,LOC107597301,LOC107672632,LOC107741249 coding downstream 244552 5430566 ~ 5435131 (-)
trpv4 trpv4,LOC107752140,LOC107741238,LOC107654595,LOC107672638 coding upstream 136068 5820352 ~ 5842997 (-)
gltpa gltpa,gltp,LOC107752155,LOC107654619,LOC107741237,LOC107597288,LOC107595968 coding upstream 159394 5843678 ~ 5849639 (-)
git2a git2,git2a,LOC107595928,LOC107752141,LOC107597287 coding upstream 174995 5859279 ~ 5884164 (-)
slc6a4b slc6a4b,LOC107654599,LOC107597334,LOC107595929,LOC107672619,LOC107741230,LOC108434249,LOC106580268 coding upstream 214611 5898895 ~ 5909991 (-)
trnak-uuu_104 NA coding upstream 272015 5956299 ~ 5956371 (-)
G33434 NA non-coding downstream 24919 5654080 ~ 5654764 (-)
G33423 acacb,LOC107752147,LOC107654593 non-coding downstream 58978 5618265 ~ 5620705 (-)
G33409 LOC107684993,LOC107597297,LOC106585658 non-coding downstream 77479 5601409 ~ 5602204 (-)
LOC122344984 LOC107597340,LOC107752133,LOC107684988,LOC107672606 non-coding downstream 82054 5574164 ~ 5597629 (-)
LOC122344983 LOC107684988,LOC107597340,LOC107752133,LOC107741245,LOC107672606 non-coding downstream 84509 5588045 ~ 5595174 (-)
G33533 NA non-coding upstream 211844 5896128 ~ 5897353 (-)
G33542 NA non-coding upstream 261705 5945989 ~ 5946874 (-)
G33544 NA non-coding upstream 268992 5953276 ~ 5959213 (-)
G33549 NA non-coding upstream 284958 5969242 ~ 5982803 (-)
G33610 NA non-coding upstream 487860 6172144 ~ 6172412 (-)
G33175 NA other downstream 1056625 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 1486602 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 1781105 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 1926919 3744675 ~ 3752764 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other downstream 2719506 2951462 ~ 2960177 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 1139887 6824171 ~ 6826182 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 1238562 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 1698062 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 2022686 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 2034281 7718565 ~ 7721758 (-)

Expression


Co-expression Network