G33615


Basic Information

Item Value
gene id G33615
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6178172 ~ 6178671 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU49541
GATGTTAAAAATACGAAAAGGTCAAGCTTTTCCCTCAGCGAGAATGAGGCGGAGAGAATAAAAGTGGAGAATGTGTGCGTTAACGCATGATGTTTCACAGGGTCACGAACAGGTATTTCTGCCGAGATGGGATGCAGCGGACGTCTTTTTCTTTGCCGTGTGAAACAGTTCTATAATAGTGGTATAGGTTTATGACTGCAAAAAGAATATTTCTCCTTTAATGGCTGTCCAAAATTAGCCGTGTGTTTTTGCAAGCAACATATAGTAGGCCTGTATCactataattgtattttacttCAATAACATCAGCTATTTTTGAGAAAAGTTAactatttaattacaatttttcaaTTAAGTAGTTGGTAAGTTTAGGAATTGGGAAGcaattagagatgtagaataaggcattagtatgtgcttaattagcattaataaatggctaatgttttggtaatatgcatactaaaaagcaactaataggtgttaAGTGTTACCATATT

Function

GO:

id name namespace
GO:0005887 integral component of plasma membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49541 True 500 lncRNA 0.35 1 6178172 6178671

Neighbor

gene id symbol gene type direction distance location
ankra2 ankra2,LOC107757524,LOC107655931,LOC107596806,LOC107718646,LOC107700928,LOC107596181 coding downstream 78471 6096157 ~ 6099701 (-)
foxd1 foxd1,LOC107598200,LOC107718663,LOC107700903,LOC107596217,LOC107757501 coding downstream 88616 6086801 ~ 6089556 (-)
trnak-uuu_104 NA coding downstream 221801 5956299 ~ 5956371 (-)
slc6a4b slc6a4b,LOC107654599,LOC107597334,LOC107595929,LOC107672619,LOC107741230,LOC108434249,LOC106580268 coding downstream 268181 5898895 ~ 5909991 (-)
git2a git2,git2a,LOC107595928,LOC107752141,LOC107597287 coding downstream 294008 5859279 ~ 5884164 (-)
enc1 enc1,LOC107655934,LOC107757521,LOC107570861,LOC107700930,LOC107596864 coding upstream 53595 6232266 ~ 6243818 (-)
gfm2 gfm2 coding upstream 76747 6255418 ~ 6263302 (-)
aif1l aif1l,LOC107718642,LOC107570864,LOC107757519,LOC107596876 coding upstream 87066 6265737 ~ 6281395 (-)
lamc3 lamc3,LOC107596886,LOC107718641,LOC107700933,LOC107757520,LOC107570860 coding upstream 104103 6282774 ~ 6343615 (-)
ttll11 ttll11,LOC107700937,LOC107596909,LOC100002237,LOC107693816 coding upstream 584465 6763136 ~ 6792026 (-)
G33612 NA non-coding downstream 4059 6173847 ~ 6174113 (-)
G33610 NA non-coding downstream 5760 6172144 ~ 6172412 (-)
G33549 NA non-coding downstream 195369 5969242 ~ 5982803 (-)
G33544 NA non-coding downstream 218959 5953276 ~ 5959213 (-)
G33542 NA non-coding downstream 231298 5945989 ~ 5946874 (-)
G33681 NA non-coding upstream 430778 6609449 ~ 6611492 (-)
G33683 LOC107588773 non-coding upstream 433069 6611740 ~ 6613055 (-)
G33738 NA non-coding upstream 580238 6758909 ~ 6847805 (-)
G33768 NA non-coding upstream 657288 6835959 ~ 6858383 (-)
G33791 rpl7a,LOC100194725 non-coding upstream 770873 6949544 ~ 6952310 (-)
G33175 NA other downstream 1555114 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 1985091 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 2279594 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 2425408 3744675 ~ 3752764 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other downstream 3217995 2951462 ~ 2960177 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 645500 6824171 ~ 6826182 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 744175 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 1203675 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 1528299 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 1539894 7718565 ~ 7721758 (-)

Expression


Co-expression Network