G33768


Basic Information

Item Value
gene id G33768
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6835959 ~ 6858383 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU49756
CTCGTTATTTCGAAACTGCAGCCTTTCCTGAGTAACAGCGCTCTCTTTCGCATGATCCCCGATTTCTCTCGCCCCAAGTACATGTTAATATCCGAATTCATGGTGGTGGGATAGCAGGGCACGCGGGTCCTGGCTGCAGGCGCAGAGACACAGAGGCAGCGCGAGCgctgatgatgatggtgatgcgGCTCCGCTCCGCGTCTGGCGAATGGAGAACCGGGAGGGCGCACAAAGAGAGAGTGGTATATAAGATCAACAGAGGGTCCTCCTCCACGGGAAAAGCAAAAAAGTGAGCCACGCACTTTCAGCGGCCGGAGAAGtacgTCAGCGCTGGCTCTTTGTCTGTCACTGCACAGAATAAATATCCGTGTTTGGTGAAAGCTTCTCTTGGACTAAACTTGTTCAGCGCCATAACTGCAGGGATGGCCATTGTTCTGATGGGCGTACAGATTGCATTATTATCATTGGATTTGCCAAGTTTATATGATGAGtattttattttgagggTCACTGGAATATTGCTGGTGTTCACCATTCTTCAGTTCATCATCTCCATCTGTATCTCAGCATTCGTCTGCGAGGCCGTCTGcaacaaaaactctacagtagTGAATGTGCACTAAACCAGGTAAACCATGAAGCGGTTGCTATTACGAGTTCGGTAATCAGTCTTACCACAGCAATCGGTAGTTATTTGTGTCAGTCATTTTAGAGAACGGCGCAGCTCCAGTGAACAAGCAGAATGATAAAACTAGCAGAATGTAAAGGAAACGTTTCATGGTAAACTGCCTTTAAACTTGGTGCACCTCGTGTTGTATGAAATAGATATAGGAACTACTGTATAAGTCAATCAGaacatgctttaatgtttttctctttataaTGTTTCATAGACAGAAgcctataaaaataaactgtatggtgtatatttttattcaaattaaaacagtCTTGTGTACTAATGTATCTTGTTACTTCCAA
>TU49760
ttttaagatcaCAAACAAAGGCACTAGGGACTGTCCAGATTAAGATTGGAGTGGTGTTTTTCTTGTTTGGTATCGTGTGCAGCTTCAGTACCTTCGAAACACCAATTTTTATCTTCAGTGGCATCAGCTACTGGGGATCCGTTATCtaCATCAGCGCTGGCTCTCTGTCTGTTGTCGCGCAGGATAAACTTCATCTGTGTGTGGTGAAAGCCTCTCTTGGAATGAATGTGATCAGTTCCGTAACTGCAGTGGTTGCCATTTTTCTGATGACCTCAGATATATATCTACTTTCAGTACACTCTCACAAAAAATGTAAGagCTATGAAATCTTGATATTCGGAGCATTGCTGGTGTTCTCCTTCCTTCAGTTTATCATCTCCATCTTCATCTCAGGATTTGCCTGCAAAGCCACCTGCAACACAGACTCTACAGTGGTCAATGTGGGACTAAACCGGAAATGCTGAGTCAAAGTGAGAAGATCCTGATCTCCAAATATCGCAAGGAGCTAATAACTCATATTGTTGCTTCTGATAACTCAAGCCAGTTTTGCAAATGTATAATCATTTTCTTCATCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49756 True 981 lncRNA 0.44 4 6840371 6858383
TU49760 False 576 lncRNA 0.41 6 6835959 6838588

Neighbor

gene id symbol gene type direction distance location
LOC122344933 NA coding downstream 5132 6828115 ~ 6830827 (-)
ttll11 ttll11,LOC107700937,LOC107596909,LOC100002237,LOC107693816 coding downstream 43933 6763136 ~ 6792026 (-)
lamc3 lamc3,LOC107596886,LOC107718641,LOC107700933,LOC107757520,LOC107570860 coding downstream 492344 6282774 ~ 6343615 (-)
aif1l aif1l,LOC107718642,LOC107570864,LOC107757519,LOC107596876 coding downstream 554564 6265737 ~ 6281395 (-)
gfm2 gfm2 coding downstream 572657 6255418 ~ 6263302 (-)
ptges ptges,LOC107710751,LOC107693847,LOC107598231,LOC107691017,LOC107726289,LOC107587481 coding upstream 59482 6917865 ~ 6921619 (-)
med22 med22,LOC107710756,LOC107691021,LOC107596962,LOC107726295,LOC107693846,LOC107587409 coding upstream 87131 6945514 ~ 6949315 (-)
LOC122345529 surf1,LOC107726301,LOC107693844,LOC107587407,LOC107725413 coding upstream 94027 6952410 ~ 6954782 (-)
LOC122344928 LOC107691049,LOC107598263,LOC107723339 coding upstream 161144 7019527 ~ 7042597 (-)
lmo4a lmo4a,LOC107691029,LOC107723366,LOC107597048,LOC107587399 coding upstream 231782 7090165 ~ 7102731 (-)
G33683 LOC107588773 non-coding downstream 222904 6611740 ~ 6613055 (-)
G33681 NA non-coding downstream 224467 6609449 ~ 6611492 (-)
G33615 NA non-coding downstream 657288 6178172 ~ 6178671 (-)
G33612 NA non-coding downstream 661846 6173847 ~ 6174113 (-)
G33610 NA non-coding downstream 663547 6172144 ~ 6172412 (-)
G33791 rpl7a,LOC100194725 non-coding upstream 91161 6949544 ~ 6952310 (-)
G33802 ccbl1,LOC107691018,LOC107731000,LOC107587404,LOC107596979,LOC107726298 non-coding upstream 101892 6960275 ~ 6961261 (-)
G33803 NA non-coding upstream 105572 6963955 ~ 6964175 (-)
G33804 NA non-coding upstream 105877 6964260 ~ 6964511 (-)
G33805 NA non-coding upstream 109344 6967727 ~ 6968241 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other downstream 9777 6824171 ~ 6826182 (-)
G33175 NA other downstream 2212901 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 2642878 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 2937381 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 3083195 3744675 ~ 3752764 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 64463 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 523963 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 848587 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 860182 7718565 ~ 7721758 (-)
si:ch211-117m20.4 si:ch211-117m20.4,LOC107663429,LOC107597540,LOC107717881,LOC107677428,LOC107677427 other upstream 1302494 8160877 ~ 8164026 (-)

Expression


Co-expression Network