CI01000004_14105873_14111615 (PLK3)



Basic Information


Item Value
gene id CI01000004_14105873_14111615
gene name PLK3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14105471 ~ 14112705 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000004_14105873_14111615.mRNA
GTACAAAAAACCCTAAACAGAGGAAAATAGAAATCCAGTGCAAGTCATCCGGAGATCCATAATCCCGTCAGCCGTGATTGGATGATGTGTTTTCCTATCTTTTCATTCAGTTTTCTCCAGCACTTTCATATGCGTCTCTCTTATCTTTGATTCAATCTCCACCAGCCAATGACATTGATCCTTTCCAGACGTCGCCGTCTTTCGCCCCGCCTCTGCCCATGACGTCACGAACGGTTTATATACTGGTGGCCTGCCGGTGTCCGGGCATGTTTGATTCACGGGACTAGAGAACTTGGCCAGACTTTGGGACTTCACATAAGGAGATTATTTTCTAGGGCGAAGGATCTATATTAATGAATGGATCCTGCTTGTTTTACCACAGCGCAGCGTCTTTCCTGTAAAATGATGAATCCGGATTTGTTCAAACCGTCTCAAGCGGTTCAACCGCCCGCCAAGCCGAACCGGAGTAAATCAGAGCACGTTAAGACGGAGATCGCGCAGGTGGTGGTTGACGCAAAGACTGGAAGATCGTACTGTAAAGGAAAGCTTTTGGGAAAGGGTGGTTTTGCACGATGTTACGAGATGACGGATCTTGCCAGCAACAAGATGTATGCTGTGAAAGTAATTCCTCAAAGCAGAGTGTCAAAGCCACACCAGAGAGAGAAGATCATTAATGAAATCGAGCTTCACAAAAGCCTCCAACACAAGCATGTGGTGAAGTTTTCCCATCATTTTGAGGACCAAGACAACATTTACATCTTCCTTGAACTCTGCAGCAGAAAGTCTCTGGCACACATTTGGAAAGCGAGACATACATTGACCGATCCAGAAGTACGTTACTACCTCAGACAGATCATATCTGCGCTCAAATACCTCCACAACAAAGGCATCCTCCATAGAGACCTCAAACTAGGTAATTTTTTTGTGAACGAAAACATGGAGTTGAGATTAGGAGATTTTGGGCTGGCAGCAAAGCTGGAGACAGTCGAGCAGAGGAAGAAGACTATCTGTGGGACTCCAAACTACTTGGCACCAGAGGTCTTAAACAGACAAGGCCATGGGACAGAGTCAGATGTTTGGTCGCTGGGTTGTGTAATGTACACACTGCTATGTGGGAATCCACCATTTGAAACCTTAGACTTGAAAGAGACCTACAAGTGTATTAAGGAAGTGAAATACAGTCTTCCCCCATCCCTCACTCCAGCTGCACAGAAGCTGATCTCCGCAGTCCTTCAGAAAAACCCCTGTGACCGCCTTACACTGGATCAGATACTAGCCCACGAGTATTTCACAAAGGGCTTCACTCCAGAAAAACTCCCTCCCAGCAGCTGTGTGATGGTGCCTGAGCTTAATCCACCCAGCCCTGCCAAGAAATTCTTCACCAAGATGGCTAAAAGCCTCTTTGCTGTTGAAAAGTCCCCTTGTGAGGAGAAAGATGACATTTCCAAACTGGTGTCAGGCATGGTGAAGCACTCCATCGGGCGGCAGATGAGCTACAAGACAATGGGAGTGAACGAGGTCACTTCTCCCACAGTTCAGCTAGCAAGTTCTGGCCCTTTGGACACCCCAGCCGAGGAGGAGTCCCGGAAGTCTGCATCTCGCTCCTTCAAAGGGACCGTCGCCAGCAGCACTGATGCTTGTGACGATATCCCTACCCCTGCTGCTGTAGCCGAATCTGCCATGAAGGTTCTTAGCAGCTGCTTGTCTTCCATGCCAACAGCTTCAAGAAACCCACCCTGCCTTTCCAAAACCAAGCCTTTTATCTGGGTAACCAAGTGGGTCGACTACTCCAACAAATACGGCTTTGGATACCAGCTCTCCAATCAAAACGTCGGCGTACTCTTCAACGAAGGCACTCATCTGAGCCTGTGTGACCAGCGGAGGACTGTACATTACTGTCTGACAAACAACAAACACTTTAGCTTTCCAGCTGACGCTTTACCAGAGAAGCTCCAGAATCAAAAACACATAGTGGATTTGATGGCTAACTACATGGAGCAGAATCTGATGGAGTGGATCAAGACTGATCACGCCTTAGTCATGCTCTTTGACAACCGAACCTTACAGGTTAACTTTTACACGGATCACACGAAAATTATCTTGTGCAAGACTTCGGACTCCTCGTACCTGCTGACGTACATCAGCAAGGAGCGCGTCTCTTGTTCCTACCCTCTGAACGTGCTTTCCGAGTGGGGCTGCTCTCCGGAGCTCCGGCAGCGGCTTCGTTACGTGGTACAGCTTCTCCAGCACTACACCAACCCATAATGAACCCCGCGGAACCGCTGTTCTGCTTCGTATTACGATTTGCTGCTTACCGCTTCCATTTGGGAAGCAAAAAAGGACTATGACAAAGAAAAATCAGGGGAAGCTTCCACGTTGCCACGAAGATCTCCTGTCCTTGGTCATCGGCTGGCCTCTTTGAACTATGGTGCACTATTTTTGTTTGGTTTTCCTTTTTTGCAACTGAGCCTACACCAACAGTATCACACTACCAGCTTGACTCACAGTGTGCACAACCAAAATTTGAGCCCGTTCTTTTTATTATTTTGATTTTTAGCTGGACTGAAGTGCAGATGGCATAAAAATCACAGGGTTCTTAAGCGTCTTGCTTTTGCTCGCAGTGTCCCATGCACTGCGCAAGATGGGCTTGGCTTTTTATGCTCGATCACTTGGCTTTTTTTAAAAAGAGACTTTTATTTCACTAAATAGTACACAAACAAGAGCTACGCACACCAAATGGTTATTCTTTTAATGAGATTAGTTTTAAAGATGGCAGAGGTGAATAGCTGAGGTGGAACTGTAATTCATGGAGGAGCAGTTAGGAGTGGGAGTGACTAAAGTGCCTTTCTGATGGATTCCTCTGTGCAATAATGGCCCTGTATCTCAAGCTTAAGTCACAAAGGGAATGAGACGGGCTTTATAGAGTCTTCATATTTGGTTTACCAAGTGAATTAGGCAGGAGTGGGGGAAGAAACACTACAAATACACACCTGATATAAGCTTTTTGCTCTTAAAAGTTATTATATCCTTAATGTCTGTACTTGAGGAAAAAAAAAAAGACTATGTATTCAGTGTGCCTCCAGCTTTGTTTACTTGACATGCTCCATCATAAGTAATCATAATGTCCTCAAAACTGTGACCATGGCTGTAAGTGATGTGTTTAGAATACCAACATTGTGAAAGCCATTACCCTCTCAGACAAATCCTAAGTAGTATTATTAATTAATTGTGGCACGTGTTCTATTTATTTTTTTATTTATAGTTTTTTATTTATTGATGTAACATAATTGTACGGTGTCAACACTGGGAAATGTTCAGTATGATCACTTTTTATGTATTGGGAGAGTGGGGGGGA

Function


symbol description
plk3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in Golgi disassembly; cellular response to DNA damage stimulus; and regulation of cell cycle process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm; microtubule cytoskeleton; and nucleus. Is expressed in liver; spinal cord; and spleen. Orthologous to human PLK3 (polo like kinase 3).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process

KEGG:

id description
K08862 PLK3, CNK; polo-like kinase 3

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000004_14105873_14111615.mRNA True 3355 mRNA 0.45 15 14105471 14112705

Neighbor


gene id symbol gene type direction distance location
CI01000004_14104283_14104432 NA coding upstream 786 14104283 ~ 14104685 (+)
CI01000004_14101510_14102532 CACYBP coding upstream 2244 14101510 ~ 14103227 (+)
CI01000004_14099120_14100390 MRPS14 coding upstream 4849 14098894 ~ 14100622 (+)
CI01000004_14036114_14036449 KIAA0040 coding upstream 68882 14035393 ~ 14039142 (+)
CI01000004_13959453_14004808 TNR coding upstream 100663 13959453 ~ 14004808 (+)
CI01000004_14165407_14171091 ANKRD45 coding downstream 52098 14164803 ~ 14171135 (+)
CI01000004_14172465_14263988 RASAL2 coding downstream 59760 14172465 ~ 14263988 (+)
CI01000004_14266999_14280382 DHX9 coding downstream 154294 14266999 ~ 14280609 (+)
CI01000004_14283392_14361256 LAMC1 coding downstream 169431 14282136 ~ 14363133 (+)
CI01000004_14371097_14380914 NA coding downstream 257356 14370061 ~ 14380914 (+)
G33122 NA non-coding upstream 57987 14046584 ~ 14047484 (+)
G33086 NA non-coding upstream 279264 13825980 ~ 13826207 (+)
G33077 NA non-coding upstream 326403 13778766 ~ 13779068 (+)
G32959 NA non-coding upstream 352618 13651058 ~ 13752853 (+)
G33137 NA non-coding downstream 284 14112989 ~ 14113488 (+)
G33163 NA non-coding downstream 42786 14155491 ~ 14155762 (+)
G33150 NA non-coding downstream 51514 14164219 ~ 14201867 (+)
G33144 NA non-coding downstream 64701 14177406 ~ 14189890 (+)
G33149 NA non-coding downstream 156182 14268887 ~ 14358978 (+)
CI01000004_12646972_12652534 NA other upstream 1449760 12646838 ~ 12652570 (+)
G31865 NA other upstream 1910324 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 2437812 11666900 ~ 11667659 (+)
G31710 NA other upstream 2463071 11637251 ~ 11642400 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 978539 15091200 ~ 15097173 (+)
G34220 NA other downstream 1826652 15939357 ~ 15939950 (+)
G33815 NA other downstream 1950710 16063415 ~ 16066464 (+)
G34400 NA other downstream 2864623 16971995 ~ 17025976 (+)

Expression



Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015622 plk3 coding NC_007113.7 CM002886.2 35603637 ~ 35611789 (+)