G34315


Basic Information

Item Value
gene id G34315
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 8255859 ~ 8262919 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU50549
CAAGATGACACCTGCTTTCTCGAGGAGCAGTCAAGAGAGCGACGGGATCAAAGAGGGGCTTCTGAAGAATAAAAGAGCGGGCGACTATCTGAGAGCCGTTCATCGAGGTGTTCACCAGACGTACTGACCTGGGAACactgtttctctctcagctTGACctcttcctccacaagtctctgtctgtgtgcagTCTCATCCAGCAGCCTCCTCTCCACCTCCTCTCGCCGCCTTCTCTCAGCCTCCAGCAGCTGCTTTCGTGCCTGGACTTCCCTCTCCtgacgaaaaaaaaagaagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50549 True 296 lncRNA 0.54 2 8255859 8262919

Neighbor

gene id symbol gene type direction distance location
hmbsa hmbsa,LOC107717875,LOC107722788,LOC107597563,LOC107587344 coding downstream 45670 8203420 ~ 8210189 (-)
dpagt1 dpagt1,LOC107587348,LOC107717886,LOC107597531,LOC107722798 coding downstream 80502 8171423 ~ 8175357 (-)
LOC122345805 hinfp,LOC107677425 coding downstream 85232 8164171 ~ 8170627 (-)
abcg4a abcg4a,abcg4,LOC107717882,LOC107722792,LOC107677424,LOC107587350,LOC108429752 coding downstream 101079 8138108 ~ 8154780 (-)
pdzd3b LOC107598091,LOC107722765,LOC107677407,LOC107587439,LOC107664508 coding downstream 119252 8131517 ~ 8136607 (-)
stk36 stk36,LOC107598122,LOC107722762,LOC107717884 coding upstream 9030 8271949 ~ 8282158 (-)
c5h11orf53 zgc:158412,cunh11orf53,LOC107597648,LOC107677422,LOC107722790,LOC107587338,LOC107717870 coding upstream 19473 8282392 ~ 8287689 (-)
adamts15a adamts15a,LOC107681261,LOC107717868,LOC107722794,LOC107677442,LOC107587336 coding upstream 106653 8369572 ~ 8386394 (-)
ubash3ba ubash3ba,ubash3b,LOC107709710,LOC107597727,LOC107677436,LOC107722770,LOC108259961 coding upstream 248683 8511602 ~ 8537027 (-)
f11r.1 LOC107597734,LOC107722768,LOC107709707,LOC107677438,LOC107681232,LOC107587332 coding upstream 274773 8537692 ~ 8543385 (-)
G34309 NA non-coding downstream 37383 8216963 ~ 8218476 (-)
G34310 LOC107722772,LOC107587343,LOC107717878,LOC107597552 non-coding downstream 55777 8199230 ~ 8200082 (-)
G34290 NA non-coding downstream 155159 8100486 ~ 8100700 (-)
G34276 NA non-coding downstream 241922 8013686 ~ 8013937 (-)
G34275 NA non-coding downstream 242308 8013347 ~ 8013551 (-)
G34332 atf5a,LOC107717872,LOC107722784,LOC107587340,LOC107597628,LOC107677421 non-coding upstream 4174 8267093 ~ 8270648 (-)
G34336 NA non-coding upstream 26980 8289899 ~ 8290183 (-)
G34374 NA non-coding upstream 158603 8421522 ~ 8425502 (-)
G34389 NA non-coding upstream 198129 8461048 ~ 8462056 (-)
G34392 NA non-coding upstream 200454 8463373 ~ 8463603 (-)
si:ch211-117m20.4 si:ch211-117m20.4,LOC107663429,LOC107597540,LOC107717881,LOC107677428,LOC107677427 other downstream 91833 8160877 ~ 8164026 (-)
si:dkey-220k22.3 NA other downstream 534101 7718565 ~ 7721758 (-)
LOC122345606 LOC107712378 other downstream 544035 7706970 ~ 7711824 (-)
G33998 LOC108444092 other downstream 858706 7382346 ~ 7397153 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other downstream 1312656 6922846 ~ 6943203 (-)
G34372 zbtb44,LOC107597664,LOC107717865,LOC107677410,LOC107587334,LOC107722796 other upstream 148963 8411882 ~ 8414806 (-)
timm8b timm8b,LOC107717885,LOC107598437 other upstream 166781 8429700 ~ 8431586 (-)
LOC122345093 NA other upstream 411310 8674229 ~ 8677718 (-)
G34580 LOC107681240,LOC107709820,LOC107560234,LOC107715750 other upstream 666551 8929470 ~ 8930053 (-)
vamp5 LOC107594989,LOC107681225 other upstream 952579 9215498 ~ 9220528 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G484659 NA non-coding CI01000339 null 5858808 ~ 5861203 (-)