G35501 (fam76b,LOC107680374,LOC107592275,LOC107687655,LOC107597227)


Basic Information

Item Value
gene id G35501
gene name fam76b,LOC107680374,LOC107592275,LOC107687655,LOC107597227
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11212039 ~ 11213737 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU52280
TTTGGATCTGCTTACTTGTGATGCGAACTTCCATGTCTGTggtgctgatgatgatgatggtgtcTCTGATGTTCCTTCTCACTGAGGGAAGAGGAGTTAGAATGGGAAGAGCCAAGGCCTTTCCGCtgctcttttgttttctgtagaaCACGACGGTATGAAAGCGTGCAGAGCCAACACAAGAGCTTCCCATCCACCTCGTCTTTCCTGTCGAAGGCACACTGCTGCTTGCACTGTTCGCAGGTCTGTGGAGGGCCATACTTCTTCTCAGAGTTGGTGCAGCGCTGACATTTGGTCCCAATGAATGCAGCAATAATATTACAGTACTGACATGGCTTCgg

Function

symbol description
fam76b Predicted to be located in nuclear speck. Orthologous to human FAM76B (family with sequence similarity 76 member B).

NR:

description
PREDICTED: protein FAM76B isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52280 True 341 lncRNA 0.49 2 11212039 11213737

Neighbor

gene id symbol gene type direction distance location
kat5a kat5a,LOC107597226,LOC107592273,LOC107680373,LOC107732605,LOC107687657 coding downstream 2598 11204478 ~ 11209441 (-)
gjb1a cx27.5,LOC107597344,LOC107687661,LOC107592389,LOC107680359,LOC107732608,LOC105893222 coding downstream 14835 11193469 ~ 11197204 (-)
gja2 cx39.9,LOC107597224,LOC107687660,LOC107747814,LOC107732602,LOC107680361,LOC107592390 coding downstream 19781 11189333 ~ 11192258 (-)
ercc6l ercc6l,LOC107687665,LOC107726361,LOC107592361 coding downstream 141270 11064771 ~ 11070769 (-)
ctdnep1a ctdnep1,LOC107672750,LOC107744461,LOC107599947,LOC107687669,LOC106577558 coding downstream 193197 11013727 ~ 11018842 (-)
si:dkey-125i10.3 NA coding upstream 117252 11330989 ~ 11336101 (-)
agtr2 LOC107672423,LOC107597233,LOC107733228,LOC107680405,LOC107592269,LOC107732613 coding upstream 124129 11337866 ~ 11345096 (-)
tpcn1 tpcn1,LOC107732611,LOC107733226,LOC107672457,LOC107680394 coding upstream 134891 11348628 ~ 11361935 (-)
cfap73 LOC107680393,LOC107732615,LOC107592352,LOC107592387,LOC107578638 coding upstream 151341 11365078 ~ 11368614 (-)
tbx5b tbx5b,LOC107733219,LOC107592384,LOC107672879,LOC107748638,LOC107680353,LOC107597309 coding upstream 160065 11373802 ~ 11381783 (-)
G35479 LOC107687695,LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107687664 non-coding downstream 61267 11145973 ~ 11150772 (-)
G35441 LOC107747818,LOC107680407,LOC107687663 non-coding downstream 87692 11102653 ~ 11124347 (-)
G35467 NA non-coding downstream 92812 11115010 ~ 11119227 (-)
G35423 NA non-coding downstream 147592 11062900 ~ 11064447 (-)
G35422 map7d2a,LOC107754729,LOC107687666,LOC107599951,LOC107726367 non-coding downstream 149151 11060938 ~ 11062888 (-)
G35499 NA non-coding upstream 6231 11219968 ~ 11220891 (-)
G35450 NA non-coding upstream 35462 11249199 ~ 11250006 (-)
G35434 NA non-coding upstream 90544 11304281 ~ 11330366 (-)
G35522 NA non-coding upstream 97812 11311549 ~ 11312830 (-)
G35592 LOC107741189,LOC107680392,LOC107565414,LOC107733362,LOC107597318 non-coding upstream 457220 11670957 ~ 11674817 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 242921 10960311 ~ 10969118 (-)
G35384 NA other downstream 285876 10923927 ~ 10926163 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other downstream 337975 10868364 ~ 10874064 (-)
G35122 NA other downstream 750330 10461208 ~ 10461709 (-)
si:dkey-96l17.6 si:dkey-96l17.6,LOC107672751,LOC107738297,LOC107592400,LOC107744487,LOC108434467,LOC105902719 other downstream 876696 10324959 ~ 10335343 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other upstream 206218 11419955 ~ 11467122 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other upstream 370043 11583780 ~ 11652627 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other upstream 581919 11795656 ~ 11815944 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other upstream 951666 12165403 ~ 12169410 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 1104066 12317803 ~ 12319685 (-)

Expression


Co-expression Network