G35554 (LOC100304549,LOC100219516,LOC106514001,LOC103353280)


Basic Information

Item Value
gene id G35554
gene name LOC100304549,LOC100219516,LOC106514001,LOC103353280
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11583780 ~ 11652627 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU52344
CTGAGTGACGTATGCACTTCCTCTTTGCTCCTGCGCCGCGAGGGCAACCATGGTGAACGTACCGAAGACCCGCAGGACTTACTGCAAGAAATGCAAAAAGCACCAGCCACATAAAGTGACCCAGTACAAGAAGGGCAAGGACTCTCTGTACGCCCAGGGAAAGAGGCGTTACGACAGAAAGCAGAGTGGTTATGGAGGACAGACAAAGCCTATTTTCCGGAAAAAGGCTAAAACCACAAAGAAGATTGTGCTGAGGCTGGAGTGCGTGGAGCCCAACTGCCGCTCAAAGAGGATGCTGGCCATTAAGAGATGCAAACACTTTGAGTTAGGAGGAGACAAGAAGAGAAAGGGCCAGGTCATCCAGTTCTGAGCTGGGCCAAATGCTTCTGTTGTGGTTTACCATCACTGTCAATAAAAGTTGTATACAGTTAaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaaaaaaaaaaaaaaaaaaaggcatggtTGTCAGCCTTTTCTATGTATTTTGTTCAAGCAGACTTGAGctaacaaacagaaaataagactGCAGACAGTTGAGTATATGCTATCCAGTCCTTATTGGCTGATACCATGGCAACCATCactgaaaaagacattttgatgCTCTGTGTGTCCTTTGTAAACTCTTTGTAGCTTATATGGATGTTTTGTATATCAAGCAGTGTTTGTAAGTAAAGGACAaaggttttctctttttttgcagtaaCAATAAAGGAAAATAAGACTGAGGCTTCTAGAATTGTTGTTGATCTATctataattattgttatgtttttatttttgcaacaaaaaaaacgatttaagtgaaatcttttatatatatctactTCATGTTGTGTATTTCTGTACAATCAGAGTGGGCATATCCAATGTGAGTGGTCTGCATGCAGTGGTGCTGAAAAC

Function

NR:

description
60S ribosomal protein L36a

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52344 True 931 TUCP 0.39 7 11583780 11652627

Neighbor

gene id symbol gene type direction distance location
vma21 vma21,LOC107741184,LOC107565438,LOC107680358,LOC107756551,LOC107672888,LOC107597345 coding downstream 967 11580834 ~ 11582813 (-)
npas2 npas2,LOC107672582,LOC107597247,LOC107741183,LOC107565421,LOC107680380 coding downstream 9817 11527062 ~ 11573963 (-)
radx LOC107672617,LOC107756553,LOC107680386,LOC107597314,LOC107680354 coding downstream 57743 11519575 ~ 11526037 (-)
brwd3 brwd3,LOC107672566,LOC107680390 coding downstream 121019 11442622 ~ 11462761 (-)
chmp1b chmp1b,LOC107672547,LOC104940072,LOC101476317 coding downstream 141359 11439109 ~ 11442421 (-)
LOC122345659 NA coding upstream 29593 11682220 ~ 11689922 (-)
LOC122345938 NA coding upstream 51604 11704231 ~ 11707716 (-)
arhgap20b LOC107672940,LOC107597255,LOC107663218,LOC107746244,LOC107573640 coding upstream 78892 11731519 ~ 11768014 (-)
fdx1b LOC107672951,LOC107746235,LOC107597349,LOC107741288,LOC107663211 coding upstream 124985 11777612 ~ 11786143 (-)
zc3h12b LOC107741193,LOC107746237,LOC107672716,LOC107597257,LOC107663225 coding upstream 172640 11825267 ~ 11840042 (-)
G35434 NA non-coding downstream 253414 11304281 ~ 11330366 (-)
G35522 NA non-coding downstream 270950 11311549 ~ 11312830 (-)
G35450 NA non-coding downstream 333774 11249199 ~ 11250006 (-)
G35499 NA non-coding downstream 362889 11219968 ~ 11220891 (-)
G35501 fam76b,LOC107680374,LOC107592275,LOC107687655,LOC107597227 non-coding downstream 370043 11212039 ~ 11213737 (-)
G35592 LOC107741189,LOC107680392,LOC107565414,LOC107733362,LOC107597318 non-coding upstream 18330 11670957 ~ 11674817 (-)
G35594 NA non-coding upstream 39923 11692550 ~ 11694947 (-)
G35597 NA non-coding upstream 43564 11696191 ~ 11697674 (-)
G35599 NA non-coding upstream 45321 11697948 ~ 11699666 (-)
G35601 NA non-coding upstream 48606 11701233 ~ 11703708 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other downstream 116658 11419955 ~ 11467122 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 614662 10960311 ~ 10969118 (-)
G35384 NA other downstream 657617 10923927 ~ 10926163 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other downstream 709716 10868364 ~ 10874064 (-)
G35122 NA other downstream 1122071 10461208 ~ 10461709 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other upstream 143029 11795656 ~ 11815944 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other upstream 512776 12165403 ~ 12169410 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 665176 12317803 ~ 12319685 (-)
G35936 NA other upstream 849287 12501914 ~ 12505958 (-)
G36047 NA other upstream 1401217 13053844 ~ 13054857 (-)

Expression


Co-expression Network