G35690 (LOC107597260,LOC107746241,LOC107672756,LOC107741198,LOC107663227,LOC107557115)


Basic Information

Item Value
gene id G35690
gene name LOC107597260,LOC107746241,LOC107672756,LOC107741198,LOC107663227,LOC107557115
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11866762 ~ 11871053 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU52557
ACAAACTTGCAGTACTGATGTCTATTAAGGGTTTATTTCCAGTCAGTGTTGATTCATGTGTGGAAAGGGATTGCGTCCAACAGATGTGGTTGATATGTTTAAAccttatgaaaatgaatgtcaaGTTTTAGTGATGTTCTAACATTCTTCGTCTGTGCATGTACATACTTGcgtattaaaacacaaaacggGAAGGGGGATGCTTTTGGTTTTCTGATACGTCTAAAAACAGGGTATGGACAATCACACAAATGTACCAAatgcaagaaataaaaagaaaacattaattataGAACAGTACTGGATTGATCTGCAAGGAAACACAAAGGTTGATTAATTCCTAAGAGCTGAATATACGCACTGGTAAAAATGGTAAGTGCATTAATCTGACTTTGGCATTCTGATGAGGGTAGATGATTGTGACTGTAGTACAACAGCACAGAACAATCACATAATGTCATTAAAGGCTTTACTGACATTCTCTCTCAAATGACTCGAGATAGTACCCTTTGATTATCAACTACATAGATCATATTTACTGAAGACTTCAGGCCAGATCTGACTTGAATGTATGCAGAGAATACTCAAATACGCAGATATCCATACAGTTAATACAGTACATTATGCAATCCCAAACAATCACTTACTGTTTAGCAGCACAAAAGTGTATCAAGGACGTTGGCCAAAATGCCACTCATTTAATGGGCATTTTGCCTATGAAAGTAGCATGTGCTACTCCGAAAACAAGAAAATGCAGTATAAAAGAAATGTGTGACTAGCTAAACGAGAAGTTTAAAAAGTTCCAagatgtaaacattaaaaccttgaaacatacagcatatttttgatttcaaaacaaaaagtgttaaaaaattaaaaaatatttttacaaactaGGTTTGATACTTCTAAGATGATATCGGTTTCAATTTGCTAATGAAGGTTTTCATTCTTATGCTAAAACAATTTATATGTTGTTGTCTTTTTGCAAATGAACctaaaacaaatccaaaaccAAATGGATCAATTTCGTTAGCGATAACTGGCTACATAAATGCAAAGCAATATGGCATCTATATATAGACAGCACCTGCTGAGTAATGCTGTAACAAATACAGGTACAAATACAAGTCCTCTTAAACTAAAACATAGCTCAAAAACTACACAGTACATCACAAAAGAATACAATAGCTTATCCGGCAGTAACAGCAactacagtgtgtgtgagtggaatACAATTCAAGACTGTCAGTAAACATCCAGCATCGTCTTTGGTGACGAGACTTGtctatttgtattgttttacttAGAGTAGGAGAGGTTGTTTATAATTTGGGTGGTGCAGGAGTGAAGCCACCCTCAAGTTCCCCCCTCCGGTTCTTTATGGGAATTTCTCGATGGTCTGACGATTGCTCGGAGCGAAGGTGGGGCACACCTTGAGTGACCCCAACAGGTCGATTCTTCCACTGCATACCTGTAGGGGGGTAACTGCAAGGGTAAAGGGCATCGCCTCCCCCGAACAAAATCTCCCCATCACCATCGGCTCTAGCGGTTCCAGGGTGGTTACGATTACGGCAGTTGTTCTTTAGGGGGAGATATGAAGGTCTTACAGTTGATTGGCCCACGTGTGGCAACTTTGCTTCTTGCTGGGAAGAGTCTGAAGACTCAAAACCCCGCCCATAGCCCCGCCGCCAACTATCAACAGTGACCCTGCAGGGCTGTCGCGGTAATGCCGTATCACTACAATCAGCAGTCCTACGCTGTGAAAATCCAGAGTCACAGTTGGTGTAAAGCTCACTCGTCTGAAACTCCAGACTGTCCGTATCAAGAGAGCGACTGCGCCGGTTTAGTGCTAATGGGGCAGGGACAGGAGGACAAGGTCGACCCAAACTGAGGTGGCGAGGCAGGCTAGCAATGCCCCAAGCGTTACTAAGCAAGAGACTTTGTTCGTAGGCATCAAAGGTACGCTGGTCACACTCAGCAAAGGCATCCTGCTGAAGGTAACAGCCATCATCCTCGAAGTGTTCATAAGGAGATGCTagctcttcctcctcctcctcaacAAGTTCGGTCTGCTGCTCACATTCACCCTCATTCTCCATGTCAACCACATCGAACGTGACAATGGCGGGCAGGGCACTCAGACTTGGCCGGAAAGGAGAACTCGACTCTGAGCCATCAAGGCTCTCAGTAGAGTTGCGGTAAAGCCGGGTGTTCTTTGTGAAATCCACCAGTGCTTGGGAGAAGCAGACCATCAGCTCTTCTTGAGATTGACTGTAGCCTCTGGTGGGTAGTAATGGGCTCTGGCCCTCAGATTGAGGTTGCCGTCTGGTGCTCTCAGCAACATGCGGACTAAACCCTGAATCTGCAAATAATGGAGTCCCCTGGATCTGACCCCTGCTGAGAGGGTCTGGCTCTTTCACAGCTTGGGATCTTGGTGGCGATTGGGGATAGCACTGATTTATGGCTTCCTCCAAAACCATCTTACCATTGCCTGTGGAAAGGCTCGAATCATCATAGAAGCAGTCTGTGTGGAACAGAAGCTGATCTTTGGATGGGCTTCTGAGATTCTGCAGCTCGCAGCACAGAAGGGCATGTTGGATCTTGCTCAAACGCTCCTCCTCCGTCTCCATTGTTCCTGTCTCTAGGGCAGAGGAAGCCAGGGCATACAGAGGATTTGTCGGACTCTTATCTGCACCAACAAACTTGTGGGCATCCTTGGGAGGAAGAGCAGGGCTGAGTAGACGATCATCAGGCTCAAAAAGCTCATAAAGGGCATCACCACTGTAGCTGTCCCTTGGAAGCCTTTCCTGGTGAGGACGCTCTCTATTCTCCTCCTCCATACCTGGCGTGGTGGAGTCATAGTATCCCTCATCACTGTTTGGAACAGACTCCTGCCGATCGCTCTGTGGGCTCAAGAGGTCAACAGGAGTGAGGGCCGTTTCTGTGATTCCCAGTGGGCTGCTGTTGGAAGTGGCATGAATGGAGCTCATCTGCTGATCGGGAGTAAGCGAAGGGCTATCGGAGCCCATGTCTGAGGGGACATAGCAGACTTCATTGCTAGTTTCAGATTCCCACAGGCTCTGCAAGTAATCTGTGTCTATCTCATCGGGAGTTGCCATCTCTTCCCCTCCACCTTGATATGTGACAAAGCACGAGCTCCGTTTTCCCGCGTTTCGACTGCCTCTCTCGGCAGACACAGAGCTCTCTGCAACACTGACATCATCCTGGTCTGCGATGATGTCTCCACAACCAGTCAGTGAATCAAAGCTTTTCAATGATGAAACATCACCAAAGTTTAAGTTTTCAGAGGAGCAGGATACAGCAGGAGGCTCCCCTTCAGGAATGTCCACATTCTGTTCAGCCAAACGGTCCAGTTCTGACTCAGCACACAAGGGCTGATGATATGTTGTCAGTCCTTCCCGTCTCGCATTTTGTATCTCCTCCTCCTTATCCTCCTCTTCTTTTGCTCTCTTCCTCTTATCCACCTCCAGTCTGCTCCTCCTTTTTTCAGGCACTAGCGTTACATCTTTCGTACATTCAGTGGCAGCCAACGGCAGTTCGCATTCACTGCCTGTGGATTGATTAGGCACATCTGGCACCAACTCTTCGCTACGGTCACTGATACTTGACAGGGCACCAGGCACGGTTTCAGAACGGAAGTTTGAAGACATTTCAAGTGCCTCGCGTTTTtctatttcaacatttttgtttttcctgtgtCTCCGAATGCTGCTAAAAAGACCCCGAAGGCCTCTGCGCTGTCGTGGTAGAGACTGAGACTTCCCGTGATCCTCCTGTGGTTTCTGAGGATCACTGGAGGCGCAAAACTCAAAGTCCCCTGATGCCGCTTCACTGCTACCTTTGCCCAAAtcttcccagcatgctctgcTCACCCCATCATATGTCTGGCTCTTTGTAACACCTGTTTTTGATGAACCCTTTCTTTGACTTCTGCCACGGCCACCGAAAAAGCTGGGCAAAACACAGATGCTCTTCCGACCACCAAAAAACCTAAAAGCTGTCTTCCGTATTTTCACAGACGGGGGTGACTGAGCTTGAGCGCTGTCATGGGAAACAGAGTCTGTCTGTGGACCCCCTACTGCACCTACAACCTCACTTCCTGTGGCAATCTCCATATTGACACAGATGACTGTGGCTAATGGAGCATGTCTGTAGTGAATACTCCACCCTGAGAGGCAGGCTGGAAGGTATAGGGACTGTGTTTATCAGA

Function

NR:

description
PREDICTED: APC membrane recruitment protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52557 True 4234 lncRNA 0.46 2 11866762 11871053

Neighbor

gene id symbol gene type direction distance location
shisa2a shisa2,LOC107746248,LOC107672960,LOC107597350,LOC107741289,LOC107557100 coding downstream 17807 11847127 ~ 11848955 (-)
zc3h12b LOC107741193,LOC107746237,LOC107672716,LOC107597257,LOC107663225 coding downstream 26720 11825267 ~ 11840042 (-)
fdx1b LOC107672951,LOC107746235,LOC107597349,LOC107741288,LOC107663211 coding downstream 80619 11777612 ~ 11786143 (-)
arhgap20b LOC107672940,LOC107597255,LOC107663218,LOC107746244,LOC107573640 coding downstream 98748 11731519 ~ 11768014 (-)
LOC122345938 NA coding downstream 159046 11704231 ~ 11707716 (-)
gab3 LOC107746243,LOC107597263,LOC107672781,LOC107663235,LOC107741201 coding upstream 31269 11902322 ~ 11923009 (-)
LOC122345274 NA coding upstream 298541 12169594 ~ 12173002 (-)
LOC122344646 NA coding upstream 301984 12173037 ~ 12177215 (-)
LOC122345275 LOC107597264,LOC107672815,LOC107742671 coding upstream 319649 12190702 ~ 12196377 (-)
LOC122344659 NA coding upstream 401164 12272217 ~ 12273638 (-)
G35660 NA non-coding downstream 90649 11775805 ~ 11776113 (-)
LOC122344709 NA non-coding downstream 92150 11769860 ~ 11774612 (-)
G35601 NA non-coding downstream 163054 11701233 ~ 11703708 (-)
G35599 NA non-coding downstream 167096 11697948 ~ 11699666 (-)
G35597 NA non-coding downstream 169088 11696191 ~ 11697674 (-)
LOC122345280 NA non-coding upstream 307998 12179051 ~ 12179750 (-)
G35797 NA non-coding upstream 310434 12181487 ~ 12182979 (-)
G35805 NA non-coding upstream 355865 12226918 ~ 12248708 (-)
G35804 NA non-coding upstream 357529 12228582 ~ 12247509 (-)
G35812 arhgap25,LOC107597266,LOC107743332,LOC107654642 non-coding upstream 384427 12255480 ~ 12256812 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 50818 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 214135 11583780 ~ 11652627 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other downstream 399640 11419955 ~ 11467122 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 897644 10960311 ~ 10969118 (-)
G35384 NA other downstream 940599 10923927 ~ 10926163 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other upstream 294350 12165403 ~ 12169410 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 446750 12317803 ~ 12319685 (-)
G35936 NA other upstream 630861 12501914 ~ 12505958 (-)
G36047 NA other upstream 1182791 13053844 ~ 13054857 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 1708008 13579061 ~ 13582290 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000339_01025998_01028865 AMER1 coding CI01000339 null 1025974 ~ 1028932 (-)