G35834


Basic Information

Item Value
gene id G35834
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12536738 ~ 12544088 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU52759
GTTTGGACGTTCAGAAGTGGGTGTTGGGTTTGGGGAGGATCAGGAGGACTCAGAAAGCTGGTATCAATGGAGATATCAACTGTTTTAACATCATTTAACATCTCAATCTtacatttcaccccaaaatcaacagatgttttttttcctctgatatttacttttttgtcatttccgtgatcatcatttttttttttttttttttTAGGAGCCAATACGTACTCATCTTTATTCATGAAACATTAGCGTAAGAAATCCTGTGGCGTACAAGTAGTGGTTATAATTTTTGTACATGTCAGTACCTTGGACAGATAAGACTagaaacaaaatgcttttttttttttttttttttacagcttttcaCATTCTACAAACACACGAAGACTACAAATCCACATAATCCCAACATACGACATCAAATCTATACAAACATTAACAATATATCCAGTTAATTTAAACATTAGTGATCAAAGTAAGGatgacattcattttcaaatcacTCGTTAAATTCTGCGTTGCAGACATTTTTGATCACAGCCCGTTTCGGCAGGAGCTAAAAAAAACTCCTGGAAACGGCCGGTCAAGATCCAGCATTATGATCTCACTTATCATTTCACTTGGAGAATACAACTCCAGAGCTGTTTAGATACAGAGAACAATTATTCTTTTCCTGTCATGGTATATGTACAAGGTAAGCCCACGACGGTGGAATAAACTACTCCAGTTTTCAAAAGAGCTGATGTACCAGGAATGGACTACAATGTAAGACGCCATTTGCAAGAAACCACACGTAGGAGATCAAATCTGAACTCAGAAACTTATTTAgcttttgcaaatgttttctctctcttgtcttTAGATTGTAGAGTTACAGGGATCAGGACTCAAGCGCTAGTGCCACAAAAACAGCCCAGGGATTGAGTGCACTTAAACACAACGGCCTGCAGGGGGCAGCGTGGTTCAacaatgtttgaaaaaaaacttcCATTTCTAGAGTTGATCAGGTAGTTTCAATTTAGTGAATTAACAGAACCTTTGTGTATTTGTACAGTTTGAAATAAAGCGGTTAATCGCCCGAAAACTTTAAAAGCAATCCTAATGGCCTCAAATGttgaaatatgacccagacaTGTTCTTGAAAGGTTTAATGACGAACacttttataattgttttgatttatcAATTTTAATGGATGCTACACTACGAAAACTGAAATCTGAAACTTCATTAGAGAGCTCTATAACTCAGCTAGTGGTAAGCACTCTTAAAAGGTTTGCGCTACACGGTTAAATCGTAACTAAACCATCCAAATTAGACAGAATGAGAAAATGCCAGAAGGAAGCTCTTGGTCACTGAAATGTACCTGTTCCTTTAACAGAACTCTGCCAAGAACCCTCTTCAGTACTAGAATGCCCTCAAAGTTCTGAGAGCGTCATGACAGACCTCTCCAAAGAACACCAGCATCAGCATGTTCCCAGTATGCAAACCCAAGGTAAATGATCTGATTCAGTTCTgtaaactcttaaaaaaaaaaagaaaaaaaagaaaatccagcCTGCATCTCAGCCTTCGCTGCTGCTGGATTACTCTATGTTGTTTTCCTGGTTTTCAGAGGCAATTTCACTGGGTCCATAAGTCCTTAAAAACCTCTGCTGAAGATCGTCCAGTTCAGCAGGCAGAGGAATATTCAACTCCTGATTCAGAGCTAGCGCCTCAAAACAGTCCTCCAACTTCTGAAAAGCAGGCCTGAAGAAGACAGGAAAAGGAAAGAGGTAAGAGCAGGAAGTATTTCCGTCCATTATGAGGTTATGTCTCAATTACTAGTCTTTTATGCtccatttaattgattaaaaaatgaaaagcttttatGAAAAGCTATTATGAATACTGTTACAATTCAAAAcaactgttcatttaaaaatgttatttattcaggTGTTGGAAAAGGTGAATATTGAGCAGCCCTTAATGCATtctgcagtgtcacatgatccttcagaaatgtcttaatatcagttgaaaacagttatgcttGCTTACTATTTTTTGCAGAAACCATGTTACTTTATTTTCAGGATTCCTTGCTAAAtcgaaagttcaaaagaacagcatttcctTGAACAacacatgcacaaaatattctgtcacttttaaatcaatttaagcCACctagctgaataaaagcattcttCATTAAACCTGAAAATCCCAGTCGAGGGTTTAAACTTCCAACTTTTTCGAGCACAGATCATTAATCATAACACCACACCACTCCAAGGAAATGATCATTTCACATCTGTTTTGCTGGAAGGACctattgtttctattttaaactcGCATTTCTGCTCGTACTTCtgaaacatctgagacaaaaCAGTTGCACTTACCGGTTGTCCGGGGTGAGATCACAGCAAGCCACAGCCAACGCGAAGAAAGCCGGAGGACAGTGCTCAGGAAGAAACTTCTCAATGAACTTTCTCACATTGAGCCCAAAATCCAGCGTTCTCGGGAGACACTCGGGATCTGCATAAACCTGACCGATAATCTACACCAAAAGAGGAGTTCGAATAGAATGAGGACgatttaaagtgaaatgaacGTGAAGTATCTTCTTGCATAACTGCAAATGAATTGTAGCAGTTTTGACACAAACCAGTCAAGCACTGCGTTTTGTTTCGGCGTTCAACATTCGTAAGCATAAATGACAGTTCCAGGAGCGCATGCTGTACTCATAAAGTCAGAGATGTTGACCACAACAAAAGACTCTTACCTCACAAAGCACAATGCCAAAGGAGAAAATATCCACCTTCTCATCGTAGCGTTTACCTGTTTACACACAGATGAAAGAGATCCATCAAGAAAAACAAGCCTACGGATCAACtcaaaaacactgtttataGCAGACTGTGCCAATTACCTGGAGgaacatacaaaaaaacccctTGAGCACAATATTCTCAGAAATCagtaaatgtgatttaattatatacaattaaacttaaataaacTCAGAGGAAGCAAACCTTTGCACAGCATTCTAGTTAAGGCATTTGCATCCGCcgtttgacatttaaatgttatttctgcGGTTACCAGATTGGGAAAAAAGCAAGCATTGTTTAAGTTATTAGCTTTTAACCAACGACATTTTATTACTGCATTGGTATTACTTTATCTTTGGAACCACATTTCAGGGTTAAAAGAGACACTACTAACCAAATTGTAAAACTAAGCGTTTATGCAGCCCAGTGTTAAACCTGagctcgaaaaaaaaaaagtagctgtTGGACTCAAGtctagtgattttttttccctaaaatgCTCTTTAACAGACCACCCCTGTCAACATTCACACAATTCATTATGTGAGGCACTCAAGTCTCACCATTAAGCATTTCTGGGGCCATCCAGTATGGGTTCCCCACCACCGTGTAGCGTTTCTTGCGGTCAATCCGTCGAAACAGTCTTTTCTTATTGGTTGGTTTGTCGGGGGGTGGCTGCTTGACCTTATCCTCCATGATTAGACGAGATAGACCGAAATCTGCCACCACAACAGTGTTGTCCTGCAGGTGTCAGACAAGTAGGGATAAAAAGGACAAATGTGCAGAAACGTTGAGCATGAAAGTGCTAGTAGTAGATTATGAGTACAAAGGAGAACGAACAAACAaatagaaagaaatagaaaaagaaagatctTAAGATCAGAAGTCAATCCTAGCTTTAAACTATTTGCCCTTGTCTAAATGTTTAACTAAGCCCCAAAggtattttcttaaaaaaggttctttaaataGCTTGTCATAAGTGATTCGCTCAGGATACTGAGGTCAGTCGGGGTCAGACAGCATTTCCTGTCTTATCTTCTTTGCACTAACTAAACAAGTGAGCAACCATTAACTAAACAATCCTTGAGTGTGAACAGATCTTCACCCTTCACTTAGGTTTCTCTCTCCTGCTCAAGTGTTCTTACATAACTTCGGGGGCTTGTCTGCTTTAGCCGTTTTGTTTGT

Function

GO:

id name namespace
GO:0009063 cellular amino acid catabolic process biological_process
GO:0009078 pyruvate family amino acid metabolic process biological_process
GO:0009080 pyruvate family amino acid catabolic process biological_process
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901606 alpha-amino acid catabolic process biological_process
GO:0046395 carboxylic acid catabolic process biological_process
GO:0042851 L-alanine metabolic process biological_process
GO:0042853 L-alanine catabolic process biological_process
GO:0044282 small molecule catabolic process biological_process
GO:0006522 alanine metabolic process biological_process
GO:0006524 alanine catabolic process biological_process
GO:0016054 organic acid catabolic process biological_process
GO:0005811 lipid droplet cellular_component
GO:0005179 hormone activity molecular_function
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52759 True 4007 lncRNA 0.38 2 12536738 12544088

Neighbor

gene id symbol gene type direction distance location
camk2b1 camk2b1,camk2b,LOC107696072,LOC107741206,LOC108255499,LOC108444312,LOC102293296,LOC100695100,LOC103134902,LOC107386224,LOC107103247,LOC108242787 coding upstream 26730 12457911 ~ 12510008 (+)
si:dkey-13n15.2 si:dkey-13n15.2,LOC107743336,LOC107595973,LOC107654639,LOC107575942 coding upstream 79685 12434336 ~ 12457053 (+)
LOC122345277 sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 coding upstream 236557 12296255 ~ 12300181 (+)
LOC122345271 LOC107672980,LOC107743347,LOC107597351,LOC107741294,LOC107663230,LOC107557104 coding upstream 265474 12265270 ~ 12271264 (+)
LOC122344656 cds2,LOC107654641,LOC107597267,LOC107741205,LOC107663217,LOC107557099 coding upstream 291310 12237734 ~ 12245428 (+)
si:ch211-225b11.1 si:ch211-225b11.1,LOC107743342,LOC107597273,LOC107654634,LOC107595947,LOC107696069,LOC107741213 coding downstream 20104 12564192 ~ 12579711 (+)
wscd2 wscd2,LOC107597274,LOC107743343,LOC107741214,LOC107696066 coding downstream 51189 12595277 ~ 12639274 (+)
ficd ficd,LOC107741218,LOC107711781,LOC107597275 coding downstream 136593 12680681 ~ 12683727 (+)
dao.3 LOC107727161,LOC107654625,LOC107597279,LOC107741224 coding downstream 250131 12794219 ~ 12797438 (+)
LOC122346075 LOC107654625,LOC107597279,LOC107741224,LOC107727161,LOC107696048 coding downstream 254036 12798124 ~ 12802870 (+)
G35756 LOC107557121,LOC107597264,LOC107672815,LOC107663216,LOC107557098 non-coding upstream 177940 12356438 ~ 12358798 (+)
LOC122345282 LOC107597264,LOC107672815 non-coding upstream 249360 12278130 ~ 12287378 (+)
LOC122345281 NA non-coding upstream 251616 12284445 ~ 12285122 (+)
G35733 LOC107557098,LOC107663216,LOC107597264,LOC107672815 non-coding upstream 354714 12173283 ~ 12182024 (+)
LOC122345698 NA non-coding upstream 549918 11943437 ~ 11986820 (+)
G35855 NA non-coding downstream 4578 12548666 ~ 12551180 (+)
G35843 NA non-coding downstream 23096 12567184 ~ 12672206 (+)
G35864 NA non-coding downstream 96179 12640267 ~ 12641645 (+)
LOC122345920 NA non-coding downstream 101196 12645284 ~ 12647088 (+)
G35847 NA non-coding downstream 223860 12767948 ~ 12768550 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 7948 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 281066 12249138 ~ 12255672 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other upstream 593628 11924228 ~ 11943110 (+)
glra4b glra4b,LOC107741187,LOC107565418,LOC107680382,LOC108442052,LOC108259905 other upstream 884055 11638516 ~ 11652683 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other upstream 1233307 11266642 ~ 11303431 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other downstream 159264 12703352 ~ 12705245 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other downstream 259701 12803789 ~ 12807351 (+)
ins ins,LOC107596207 other downstream 1440009 13984097 ~ 13985706 (+)
G36495 NA other downstream 1746332 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 1755955 14300043 ~ 14305304 (+)

Expression


Co-expression Network