G35903


Basic Information

Item Value
gene id G35903
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12882260 ~ 12882512 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU52890
TTCAGCTTTTATTCACATTCCAGTTATATAATGGGAAGAAAAATATTCCTTCAGTTTTTACTACTTCATAAGTACATTTTACTGAAACGTGCACTAACACAGAAGTTGAATGAATCGGTAGATTCCGTGCTGAGAATGCTGAGAATGATCTCTCTCATGCCCACAAGCACATGCAATCCCATTCTCCCTCCCCAGGAATTGTTGCTATTTGGTGTCTTTGATTTGGACTTCCTGACCCGAACGCGGTCAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52890 True 253 lncRNA 0.40 1 12882260 12882512

Neighbor

gene id symbol gene type direction distance location
pxmp2 pxmp2,LOC107597355,LOC107595932,LOC107727154 coding upstream 52656 12826590 ~ 12829604 (+)
usp30 usp30,LOC107727160,LOC107741225,LOC107597278,LOC107696057,LOC100537262 coding upstream 56082 12820605 ~ 12826178 (+)
LOC122346075 LOC107654625,LOC107597279,LOC107741224,LOC107727161,LOC107696048 coding upstream 79390 12798124 ~ 12802870 (+)
dao.3 LOC107727161,LOC107654625,LOC107597279,LOC107741224 coding upstream 84822 12794219 ~ 12797438 (+)
ficd ficd,LOC107741218,LOC107711781,LOC107597275 coding upstream 198533 12680681 ~ 12683727 (+)
ptger4b ptger4b,LOC107700922,LOC107757528,LOC107596171,LOC107596756,LOC107655926 coding downstream 3717 12886229 ~ 12892279 (+)
fbp1b fbp1b,LOC107700920,LOC107718665,LOC107596168,LOC107655925,LOC107757529 coding downstream 30143 12912655 ~ 12916020 (+)
erlin2 erlin2,LOC107655923,LOC108443303,LOC107718651,LOC107596165,LOC107700919,LOC107757530 coding downstream 33658 12916170 ~ 12926498 (+)
ch25hl3 LOC107700893,LOC107718661,LOC107597898,LOC107596167,LOC107655924,LOC107757531,LOC100005337 coding downstream 47711 12930223 ~ 12935152 (+)
ar ar,LOC107757532,LOC107596701 coding downstream 83424 12965936 ~ 13022773 (+)
G35847 NA non-coding upstream 113710 12767948 ~ 12768550 (+)
G35843 NA non-coding upstream 210054 12567184 ~ 12672206 (+)
LOC122345920 NA non-coding upstream 235172 12645284 ~ 12647088 (+)
G35864 NA non-coding upstream 240615 12640267 ~ 12641645 (+)
G35855 NA non-coding upstream 331080 12548666 ~ 12551180 (+)
G35904 NA non-coding downstream 2493 12885005 ~ 12885284 (+)
G35905 NA non-coding downstream 2819 12885331 ~ 12885934 (+)
G36062 NA non-coding downstream 226120 13108632 ~ 13108853 (+)
LOC122345423 NA non-coding downstream 417243 13299755 ~ 13312652 (+)
G36109 NA non-coding downstream 441521 13324033 ~ 13324383 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 74909 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 177015 12703352 ~ 12705245 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 353470 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 626588 12249138 ~ 12255672 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other upstream 939150 11924228 ~ 11943110 (+)
ins ins,LOC107596207 other downstream 1101585 13984097 ~ 13985706 (+)
G36495 NA other downstream 1407908 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 1417531 14300043 ~ 14305304 (+)
LOC122345214 NA other downstream 1450511 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 1465050 14347562 ~ 14349991 (+)

Expression


Co-expression Network