G35905


Basic Information

Item Value
gene id G35905
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12885331 ~ 12885934 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU52892
gcatttttagattttcaaaaaattacaGGTCAAAATTTAATGATATTGCTATCTTTGtagggacatttggtccccataatgtgataaataccaggtgcacacacacacacacacacacatgcacacacatacacaccccaTTTGCTTCCTTCCTTTTTAGTTCCCTGACAAAACAGTTTGCTTCTTCTGAATTTATTCACACACCCCACCCTTCTGTTAAAAAGCATGTTGcaatttcacacaaaaacattcacattaGTGAAAATGCACATTTGTGCCTATTCAAACAGAGATGTTTGGCTAAATAGTTTTGTGGCCAACATATACAACAGTACAAAAAAGagacaattatttatttgtaatatttgtgtgcttgtgattataataatgaattaaaataatgcgGCATAGCAGACACacattacatttagaaatgatGGTAGCCACTCCTACATTAAAGATGAGGCGGAGcctatactttatttttctgtagTTTCCAAGTAGAGCAAGATCCAACACTATCTCATTTTGGATGTCTCAAGGATCTGACACTCCCAGTTTAGGAGCTCTACTATAAGAGAGACATGTTAAACATGCAGTACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52892 True 604 lncRNA 0.36 1 12885331 12885934

Neighbor

gene id symbol gene type direction distance location
pxmp2 pxmp2,LOC107597355,LOC107595932,LOC107727154 coding upstream 55727 12826590 ~ 12829604 (+)
usp30 usp30,LOC107727160,LOC107741225,LOC107597278,LOC107696057,LOC100537262 coding upstream 59153 12820605 ~ 12826178 (+)
LOC122346075 LOC107654625,LOC107597279,LOC107741224,LOC107727161,LOC107696048 coding upstream 82461 12798124 ~ 12802870 (+)
dao.3 LOC107727161,LOC107654625,LOC107597279,LOC107741224 coding upstream 87893 12794219 ~ 12797438 (+)
ficd ficd,LOC107741218,LOC107711781,LOC107597275 coding upstream 201604 12680681 ~ 12683727 (+)
ptger4b ptger4b,LOC107700922,LOC107757528,LOC107596171,LOC107596756,LOC107655926 coding downstream 295 12886229 ~ 12892279 (+)
fbp1b fbp1b,LOC107700920,LOC107718665,LOC107596168,LOC107655925,LOC107757529 coding downstream 26721 12912655 ~ 12916020 (+)
erlin2 erlin2,LOC107655923,LOC108443303,LOC107718651,LOC107596165,LOC107700919,LOC107757530 coding downstream 30236 12916170 ~ 12926498 (+)
ch25hl3 LOC107700893,LOC107718661,LOC107597898,LOC107596167,LOC107655924,LOC107757531,LOC100005337 coding downstream 44289 12930223 ~ 12935152 (+)
ar ar,LOC107757532,LOC107596701 coding downstream 80002 12965936 ~ 13022773 (+)
G35904 NA non-coding upstream 47 12885005 ~ 12885284 (+)
G35903 NA non-coding upstream 2819 12882260 ~ 12882512 (+)
G35847 NA non-coding upstream 116781 12767948 ~ 12768550 (+)
G35843 NA non-coding upstream 213125 12567184 ~ 12672206 (+)
G36062 NA non-coding downstream 222698 13108632 ~ 13108853 (+)
LOC122345423 NA non-coding downstream 413821 13299755 ~ 13312652 (+)
G36109 NA non-coding downstream 438099 13324033 ~ 13324383 (+)
G36140 NA non-coding downstream 634039 13519973 ~ 13521608 (+)
G36141 NA non-coding downstream 681043 13566977 ~ 13580798 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 77980 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 180086 12703352 ~ 12705245 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 356541 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 629659 12249138 ~ 12255672 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other upstream 942221 11924228 ~ 11943110 (+)
ins ins,LOC107596207 other downstream 1098163 13984097 ~ 13985706 (+)
G36495 NA other downstream 1404486 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 1414109 14300043 ~ 14305304 (+)
LOC122345214 NA other downstream 1447089 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 1461628 14347562 ~ 14349991 (+)

Expression


Co-expression Network