G36047


Basic Information

Item Value
gene id G36047
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13053844 ~ 13054857 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU53124
AATGTTTAAACTTCGATCTAATACATACTAAATAGAACAGCCACATAGCCGTAAGTGTTCTGGAATGCTGAAAATAGCTAGAAAATACTGACTGATTCTTACCAAATGTTGACCAGCTGAAGGAGGCGGTGACAACTATGAGACGGACTATGAAACTGACGAGGCCTGAACTTCCCAGAAGAACTATACGACACACTATCATGGCCACAGTCAGAGGGAGAATACAGTACCCCAACACACAAAGACTCTGGAAAAATttacatagtTCCTCCCAGAAGTTTGGAGTTGAGGGTGATGATTACAGAACCGAACCAGATGATGACAAAGACTTCTGCAAACTGCGGCCTGCCATCCTCCTCACTGTCAACAGACCCACCCTGCAGCATTC
>TU53125
AATGTTTAAACTTCGATCTAATACATACTAAATAGAACAGCCACATAGCCGTAAGTGTTCTGGAATGCTGAAAATAGCTAGAAAATACTGACTGATTCTTACCAAATGTTGACCAGCTGAAGGAGGCGGTGACAACTATGAGACGGACTATGAAACTGACGAGGCCTGAACTTCCCAGAAGAACTATACGACACACTATCATGGCCACAGTCAGAGGGAGAATACAGTACCCCAACACACAAAGACTCTGGAAAAATGATCTtTCCTCCCAGAAGTTTGGAGTTGAGGGTGATGATTACAGAACCGAACCAGATGATGACAAAGACTTCTGCAAACTGCGGCCTGCCATCCTCCTCACTGTCAACAGACCCACCCTGCAGCATTCTGGAAGACATGATATTATAAATGTACCATATCTGCTGGAGTCATAGTGACAATAGTTCtgacagcatttctactcacaAGGCCAAAGTGACACAGAGGAGGAGAGGTCCCCATAAATCCCCTAAAAACAGCAAAGACATGCTCCTTATTAGGCAGCTGATGAACATTTAGGATTAACATTAATTCATGATATTAAACAGCCCACATGCAATATTTAACtgatcatttgttattttttattgatgaaCTGTTAATGATGGACTCACAGTCTCTGAGTAGTGCAGAACTTT

Function

GO:

id name namespace
GO:0007034 vacuolar transport biological_process
GO:0030120 vesicle coat cellular_component
GO:0030126 COPI vesicle coat cellular_component
GO:0030137 COPI-coated vesicle cellular_component
GO:0030660 Golgi-associated vesicle membrane cellular_component
GO:0030662 coated vesicle membrane cellular_component
GO:0030663 COPI-coated vesicle membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53124 False 388 lncRNA 0.44 2 13054133 13054857
TU53125 True 674 TUCP 0.41 2 13053844 13054857

Neighbor

gene id symbol gene type direction distance location
ophn1 ophn1,LOC107700916,LOC107596712,LOC107596162,LOC107655920,LOC107757505 coding downstream 3066 13020346 ~ 13050778 (-)
eda2r LOC107598184 coding downstream 98999 12943325 ~ 12954845 (-)
ttc33 ttc33,LOC107596169,LOC107757511,LOC107655901 coding downstream 142081 12894584 ~ 12911763 (-)
map1b map1b,LOC107596172,LOC107655889,LOC107757527,LOC107597920 coding downstream 190146 12844251 ~ 12863698 (-)
ptcd2 ptcd2,LOC107718650,LOC107700924,LOC107655927,LOC107757526 coding downstream 212908 12835956 ~ 12840936 (-)
rxfp2l rxfp2l,LOC107655900,LOC107700901,LOC107596199,LOC107757506 coding upstream 63510 13118367 ~ 13150538 (-)
efnb1 efnb1,LOC107746350,LOC107700912,LOC107548494,LOC107596159,LOC107757535,LOC107655917 coding upstream 215545 13270402 ~ 13303696 (-)
trnap-agg_13 NA coding upstream 320772 13375629 ~ 13375700 (-)
zgc:158432 NA coding upstream 333155 13388012 ~ 13391957 (-)
taf1 LOC107746351,LOC107700907,LOC107655912,LOC107757541 coding upstream 337799 13392656 ~ 13407947 (-)
G36012 NA non-coding downstream 120065 12933471 ~ 12933779 (-)
G36009 NA non-coding downstream 127382 12924743 ~ 12926462 (-)
G36004 fbp1b,LOC107718665,LOC107655925,LOC107596168,LOC107757529,LOC107596723 non-coding downstream 137030 12913626 ~ 12916814 (-)
LOC122345905 NA non-coding downstream 169687 12880061 ~ 12884157 (-)
G35966 wscd2,LOC107597274,LOC107743343,LOC107696066,LOC107595945 non-coding downstream 414467 12637190 ~ 12639377 (-)
G36048 NA non-coding upstream 712 13055569 ~ 13056705 (-)
G36063 NA non-coding upstream 53842 13108699 ~ 13108948 (-)
G36104 NA non-coding upstream 262378 13317235 ~ 13317462 (-)
G36108 NA non-coding upstream 268074 13322931 ~ 13323222 (-)
G36200 eda,LOC107757537,LOC107700911 non-coding upstream 315353 13370210 ~ 13373755 (-)
G35936 NA other downstream 547886 12501914 ~ 12505958 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 734159 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 884434 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 1237900 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 1401217 11583780 ~ 11652627 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 524204 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 599437 13654294 ~ 13699226 (-)
G36298 NA other upstream 662267 13717124 ~ 13718543 (-)
G36336 NA other upstream 762885 13817742 ~ 13818942 (-)
LOC122345901 NA other upstream 790546 13845403 ~ 13848070 (-)

Expression


Co-expression Network