G36048


Basic Information

Item Value
gene id G36048
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13055569 ~ 13056705 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU53126
CACACCTTTATTgaatcagcacacacacatcgGTTGCACCTTATGGTTCAGGTGCTGCAATGCATTAGAAGTGAaaattaaagtctttttttagatagaaagatgtTTGCGAAAGAATTTCTTAAATGACAGACTACATTCATACAGACAGAAAGAACACttccaatttattttttatcttctttgtgcaaaaatgaGAAAGCTCACACAATATATGCAGCACTTATTTAAGTCCATGTTTATTTCCTTCTGGAATGTTCTAACTTCCaccaatgaaaaataaatgtattgtagcCCAAACAGCTTCacaactaaaaagaaaaacccaAAGAAAAGAAACGCGTTTCACAATGTTAGGGTAGGAGGCGAATGATAGCGGATGATATTCTCCTAACAAAGAAGACACAATAACAATTACATGCACCCTCACACAGTCATAAAAACCCACCCAAGACGCACAGAACATCATACATACTCCATGTTAGGGGTGTGAGTACATCTGGAACTACTCAGGGGTGCATTAATGTTCCTcacacaacaaaacattcatataaCGAAGACATGTAGGCTGTTAAATGATTAGAGCTGAAGAATTAATGTCCTTCATTCCTTTTCTCTCCACTTATCCAACTGTATTAGGGACGGGGAGGAGTGATATCGATGCAATAATCCACTTGCTGTCCTCTGGATGTCCCTTTATGAGTGTCCATCAAAGTGTTCAGCCTTTATTAGGCTGGGCCAATCACTGGCCGGCTCCCAGACAGTCAGCTTAGCAAAGGGGGAGGAGTTCATTTTCCAATTGCCGTAGGGCGTACATATGCTaatgagaaggtgaaaatgttaaaatcatcCAGCCTATCACAAAGTAGAAGAGGAACACTGGATACACAACCAGGGCTTTCCTGTTGGGTGGTTGGCTGTCTGCAAGAAATGCTGTGGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53126 True 942 lncRNA 0.40 2 13055569 13056705

Neighbor

gene id symbol gene type direction distance location
ophn1 ophn1,LOC107700916,LOC107596712,LOC107596162,LOC107655920,LOC107757505 coding downstream 4791 13020346 ~ 13050778 (-)
eda2r LOC107598184 coding downstream 100724 12943325 ~ 12954845 (-)
ttc33 ttc33,LOC107596169,LOC107757511,LOC107655901 coding downstream 143806 12894584 ~ 12911763 (-)
map1b map1b,LOC107596172,LOC107655889,LOC107757527,LOC107597920 coding downstream 191871 12844251 ~ 12863698 (-)
ptcd2 ptcd2,LOC107718650,LOC107700924,LOC107655927,LOC107757526 coding downstream 214633 12835956 ~ 12840936 (-)
rxfp2l rxfp2l,LOC107655900,LOC107700901,LOC107596199,LOC107757506 coding upstream 61662 13118367 ~ 13150538 (-)
efnb1 efnb1,LOC107746350,LOC107700912,LOC107548494,LOC107596159,LOC107757535,LOC107655917 coding upstream 213697 13270402 ~ 13303696 (-)
trnap-agg_13 NA coding upstream 318924 13375629 ~ 13375700 (-)
zgc:158432 NA coding upstream 331307 13388012 ~ 13391957 (-)
taf1 LOC107746351,LOC107700907,LOC107655912,LOC107757541 coding upstream 335951 13392656 ~ 13407947 (-)
G36012 NA non-coding downstream 121790 12933471 ~ 12933779 (-)
G36009 NA non-coding downstream 129107 12924743 ~ 12926462 (-)
G36004 fbp1b,LOC107718665,LOC107655925,LOC107596168,LOC107757529,LOC107596723 non-coding downstream 138755 12913626 ~ 12916814 (-)
LOC122345905 NA non-coding downstream 171412 12880061 ~ 12884157 (-)
G35966 wscd2,LOC107597274,LOC107743343,LOC107696066,LOC107595945 non-coding downstream 416192 12637190 ~ 12639377 (-)
G36063 NA non-coding upstream 51994 13108699 ~ 13108948 (-)
G36104 NA non-coding upstream 260530 13317235 ~ 13317462 (-)
G36108 NA non-coding upstream 266226 13322931 ~ 13323222 (-)
G36200 eda,LOC107757537,LOC107700911 non-coding upstream 313505 13370210 ~ 13373755 (-)
G36213 NA non-coding upstream 323594 13380299 ~ 13438104 (-)
G36047 NA other downstream 712 13053844 ~ 13054857 (-)
G35936 NA other downstream 549611 12501914 ~ 12505958 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 735884 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 886159 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 1239625 11795656 ~ 11815944 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 522356 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 597589 13654294 ~ 13699226 (-)
G36298 NA other upstream 660419 13717124 ~ 13718543 (-)
G36336 NA other upstream 761037 13817742 ~ 13818942 (-)
LOC122345901 NA other upstream 788698 13845403 ~ 13848070 (-)

Expression


Co-expression Network