CI01000004_14571792_14572305


Basic Information

Item Value
gene id CI01000004_14571792_14572305
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14571741 ~ 14572426 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_14571792_14572305.mRNA
AGTGGGCGGAGCTTTATGATGATGTGAGCAACAGAGAGGAGTTCAAAACATTTCCACAGAATCTGCACTCAGCTCTTGTGTTGCTCTAAATGTCTTTCATTTATGATCTCTCTCAGTCATAATGTTGTTCTTTTGTCTCACGGTTCTGGCACTTCTTACAGAAAGTGTTTTTGCGAATGCAATAACACCCATGTCTACTGTAAATCATGCTGTAGAAGGAGAAAAGACGATTCTTTCCTGCAACTACAGTGGAAGTACTATACAGAGTTGGCAGTGGTACAGACAGCATCCCAACACTGCTCCAGAGTTTCTCTTGCAAGCTTTGGAAAATCAGGATCCAGCGAAGAAAGGCCGTCATGTCGCTGAAGCAAAAAAGGACAAAAAACAGCTGAATCTGGAGATCTCCAAAACTGAAATAGCAGACTCTGCCATATACTACTGTGCACTGGTGCCCACAGTAACAGGAAACCCTTCTACACTGTACAAAAACCAGACATACAGTATGATGATCACTTAACATTAATCTGAACCACACCTCTCCCACAACCATTCAAAAGATTGAAATAAA

Function

NR:

description
TCR alpha variable region, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_14571792_14572305.mRNA True 568 mRNA 0.42 2 14571741 14572426

Neighbor

gene id symbol gene type direction distance location
CI01000004_14569847_14571236 NA coding downstream 245 14569806 ~ 14571496 (-)
CI01000004_14563131_14563558 NA coding downstream 7940 14562069 ~ 14563801 (-)
CI01000004_14557340_14560918 TRAC coding downstream 10699 14557281 ~ 14561042 (-)
CI01000004_14543631_14551256 NA coding downstream 20389 14541515 ~ 14551352 (-)
CI01000004_14425486_14425711 NA coding downstream 146030 14424179 ~ 14426902 (-)
CI01000004_14574723_14575066 NA coding upstream 855 14573281 ~ 14575066 (-)
CI01000004_14591958_14594875 NA coding upstream 18850 14591276 ~ 14594875 (-)
CI01000004_14597582_14610531 NA coding upstream 24937 14597363 ~ 14610531 (-)
CI01000004_14611052_14612588 NA coding upstream 38626 14611052 ~ 14612588 (-)
CI01000004_14612987_14614652 NA coding upstream 40561 14612987 ~ 14614652 (-)
G33650 NA non-coding downstream 44114 14527408 ~ 14527627 (-)
G33648 NA non-coding downstream 45602 14525935 ~ 14526139 (-)
G33638 NA non-coding downstream 50163 14521367 ~ 14521578 (-)
G33633 NA non-coding downstream 72283 14497445 ~ 14499458 (-)
G33758 NA non-coding upstream 16172 14588598 ~ 14589028 (-)
CI01000004_14618502_14618962 NA non-coding upstream 46227 14618156 ~ 14619037 (-)
G34461 NA non-coding upstream 115011 14687437 ~ 14693318 (-)
G34479 NA non-coding upstream 134297 14706723 ~ 14707120 (-)
G33746 NA other downstream 2477 14568793 ~ 14569264 (-)
G32207 NA other downstream 2186961 12376168 ~ 12384780 (-)
G32150 NA other downstream 2790790 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 3158834 11406957 ~ 11412907 (-)
G33750 NA other upstream 6032 14578458 ~ 14579001 (-)
G33755 NA other upstream 8980 14581406 ~ 14581873 (-)
G33756 NA other upstream 12745 14585171 ~ 14585745 (-)
G33783 NA other upstream 65425 14637851 ~ 14638474 (-)

Expression


Co-expression Network