G36140


Basic Information

Item Value
gene id G36140
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13519973 ~ 13521608 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU53255
GTCTTTACTCACCTGGGTTGTCAACACCAGTCTGGATGGCATCATCCAGGGTGAATCCAGTGGGGGTCTGCTTGTCCCTAAGCTTGGCATACATTTCCTTAGTCAGCACCTTGGCCATGTGGTTGTTGTGCTTGGTAAGGTCTGGATACTCATCTTCAACTTTGAAGTTCAGCTTGAAGTTGTTGTGGGTGTTTCCGAAAGGCATGGTTGCGTTTCTAACCTGCACACAAGACAATAAAAGTGGTAACAGTCCTTGGGATCAGATCCTGTTCACCAAAGCCGAAATAGGGGTCACCCAAGCAAGAAGAGTCTGATTTGGGTTTATATACCTCCAACCCCTGCAGCCATTGGCTAGCCCATTTTAGAGCTCActgaattctgattggctggcccCGGTATCTTATGCCCTGTTTAGTG

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0042692 muscle cell differentiation biological_process
GO:0031497 chromatin assembly biological_process
GO:0048468 cell development biological_process
GO:0006323 DNA packaging biological_process
GO:0006325 chromatin organization biological_process
GO:0022607 cellular component assembly biological_process
GO:0006333 chromatin assembly or disassembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0006334 nucleosome assembly biological_process
GO:0071824 protein-DNA complex subunit organization biological_process
GO:0065004 protein-DNA complex assembly biological_process
GO:0034728 nucleosome organization biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0030154 cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0071103 DNA conformation change biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0051276 chromosome organization biological_process
GO:0070925 organelle assembly biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process
GO:0016043 cellular component organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53255 True 417 lncRNA 0.48 2 13519973 13521608

Neighbor

gene id symbol gene type direction distance location
mark4a mark4a,LOC107746361,LOC107596145,LOC107700234,LOC105006905,LOC107693438,LOC108444027 coding upstream 2789 13498184 ~ 13517184 (+)
exoc3l2a LOC107746360,LOC107700233,LOC107548482,LOC107757547,LOC107596146,LOC107700224 coding upstream 32030 13476178 ~ 13487943 (+)
ppp1r14aa ppp1r14aa,LOC107596215,LOC107746358,LOC107548483,LOC107655902,LOC107757548 coding upstream 44964 13471000 ~ 13475009 (+)
dlb dlb,LOC107746357,LOC107596148,LOC107683914,LOC108260005,LOC108444019 coding upstream 49092 13465532 ~ 13470881 (+)
zgc:153990 LOC107548484,LOC107746356,LOC107700225,LOC107655905,LOC107757517,LOC107596149 coding upstream 59863 13454506 ~ 13460110 (+)
nccrp1 nccrp1,LOC107548479,LOC107757518,LOC107693441,LOC107596142,LOC107700228,LOC107746425 coding downstream 6743 13528351 ~ 13530862 (+)
slc8a2a slc8a2a,LOC107757550,LOC107693442,LOC107596143 coding downstream 9669 13531277 ~ 13548200 (+)
srsf7a LOC107700237,LOC107746364,LOC107548478,LOC107757551,LOC107596141,LOC107693444 coding downstream 27412 13549020 ~ 13552417 (+)
hnrnpl hnrpl,LOC107700238,LOC107693443,LOC107757553,LOC107548476 coding downstream 32390 13553998 ~ 13563864 (+)
crx crx,LOC107596137,LOC107700239,LOC107757554,LOC107693445,LOC107548475,LOC107746366,LOC105892503 coding downstream 51609 13573217 ~ 13575410 (+)
G36109 NA non-coding upstream 195590 13324033 ~ 13324383 (+)
LOC122345423 NA non-coding upstream 207321 13299755 ~ 13312652 (+)
G36062 NA non-coding upstream 411120 13108632 ~ 13108853 (+)
G35905 NA non-coding upstream 634039 12885331 ~ 12885934 (+)
G35904 NA non-coding upstream 634689 12885005 ~ 12885284 (+)
G36141 NA non-coding downstream 45369 13566977 ~ 13580798 (+)
G36168 NA non-coding downstream 126318 13647926 ~ 13648538 (+)
G36191 NA non-coding downstream 199177 13720785 ~ 13721566 (+)
G36198 NA non-coding downstream 210361 13731969 ~ 13732456 (+)
G36332 NA non-coding downstream 452924 13974532 ~ 13974759 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 712622 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 814728 12703352 ~ 12705245 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 991183 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 1264301 12249138 ~ 12255672 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other upstream 1576863 11924228 ~ 11943110 (+)
ins ins,LOC107596207 other downstream 462489 13984097 ~ 13985706 (+)
G36495 NA other downstream 768812 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 778435 14300043 ~ 14305304 (+)
LOC122345214 NA other downstream 811415 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 825954 14347562 ~ 14349991 (+)

Expression


Co-expression Network