G36224 (LOC107700249,LOC107746377,LOC107548465,LOC107710575,LOC105912484,LOC105027847,LOC106603104,LOC106563440)


Basic Information

Item Value
gene id G36224
gene name LOC107700249,LOC107746377,LOC107548465,LOC107710575,LOC105912484,LOC105027847,LOC106603104,LOC106563440
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13708100 ~ 13711959 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU53382
TTCTTCTGCAGTGGTGTGTGTGCTATAGACAGAGATTCGGTGATGCAGGAGACGACCTCCTCAGCAGCCTCCGCTCTCTCCAGGCAGAATAGCATCGCATCACCGATCTCATCCCTGCGAGGAGTCAGCCCTCTTAGCAAGGCCTCCAACCTCTCTCTGTGCCTGAGACACAACAAACACAGTCAATATGCACATGCATTACAGAAGCAAACATATGTGGGCACCCAAACATCACAGGCCtatgtgcatttcatttcaaagaaaTCGACGTCCTACAACATCTATTTCTGTCGGAGAGGAACACATGTTTACTCTGCCTTCAGGTGCCCTTTCTTTGGCTCTTCCTCTTGAGAAGGGAAGGAGGTCTCTTCTGGTTCCTCATCACCATGGAGATATGGGTTAAGAAGAGGTGGCTTCCATAGAGAGCCACCCCGGAACATTCTGAAAGGTGATGTTCTCCATTTATTTGGGTTCTCTCcCTGTAGAATGGAGTAGAGTTTCCATCTGTAGTACACATGTTCCTGACTcttattatcaaataaaaacctGCAACATTAAGTagtcatttaaatacacattcacATATGACAATCAAATgtcttaaactattttattagatatttaaaatcactCTCATGTTCTAAACCTGAATAATTGACCAAAGAGGCATTTTGCACAAAGCTGAACTTGCTCTTTTCCTTACCAGGAAAGTGAATGGTGGGTGACTACAGCAGGACTGCAATGATGACCAATGTCATTGGTTCtcataaaagtgaaatatttgcataaattgaGAGGAAAGACTTCTGAGCCTTAATATCATTTGGCTTAGACTGCTTGTGTGCAATCCGGGTTACAATCACACTGTATGATTAAAGAGAAACTTCAACACACTGCCTAATGTCTCCTTTTGTgaagtgaaattaaatttattctgGTTAAGATGATGGCACAtgacaatttaaattttaaggtGTCCTATTGGTTAGCATGAGAAATGAAAATCCACTATTTATTGTGAATTACTCATTCGTGCATGCTTAATTTCTCCTAATTTTTTAACCAGAGATTATAATGTAAGTAACAACAGATTTTTACTTCCATTTTGTGAAGTAGAGTATTGTGTAAAAATTCTTGAGAACAGAATGTTGCGTTATGACATGAATTATTCATACtcaaatattactaataacCGATTTCATGTTGAGCAAGCTTAATATTAAcggttcaaatatttgtaacaaACAGAACATCCTTTACATACCTGAAGTCAGGGTTGTTCTTTTCTCTGCTCATGATGATGGCCTCAAACATGGGTCCCTCTCTCACCACAAACTCAATCATTCTGTGTATCAAGCCCAGCAGGTTCCTATCAGTCACAAAAGAGACGGATGAGAGAATGAACAAGGGCACTCTATTCTTTTCTCCATTTTTCTTCATCACTCCAAAATAATCCCTAAAGCCTTACCATGTCAGttctatctttttcttctttcattttcacTGTCTGGCAGTTTGAAACTTGTATTTTGCTCTGTATTTTCTGTCCACTCCAAATAAGATTGCTTTCTGATGTTACCATGGCCCTATGAGACCGTTAAGGGAGTGTGTTTTAGTACAATGTTAGCTCCTACTGTGCTACTGCATGAAGTTCTACATGCTTTCACAGTAGCAATTACTGGATATGAAATTATTTACGGCAGTAGAGACTAAAGATGTTGCTGATGTTGCTAAGGGTGGGTAACCTCAAGGCATGTATGCTATATGTATCTGGGAGCGTATGAGTGACTTTTCTTGGTTACGATCTAAGATCAATGAAGTCTTAGAGTATCTTTCTGATGATCTAACCCAGTGGGTTCCTAATCCTGGTTCTGGAGATCCTCTGCTCtccacattttgcatgtctctcttatttaacacacctgattcagatcatcagctccTTAGGAGTGTGTCAGAAAAGAAAGACATTGAAAATGTGTAGAGCAGGGGATCACCAATCCCAAGATTAAGAAACACTGAACTAACCATTGTGATTAGGTGTCAGACTACAGGTgagtgcgcatgtgtgtgtgtttcagtagcaatggtgttttaataaatggacAGAGAATGTGTACCTTTCTGGGGGGATTACCACTGTCACTACGGCCTCGGACAGAGTCTGTTCATGACGTCAAACCAAATGATGAAGATACAAAAATATAGtgagtttatatttaaacaaactgcAGAATATTCATGATCAATATCATCAGTAGCAGCTAAACCTCTGGAAACATTCTCGGCAAACAGACGAGTTCATCTCACCGCTGCTTTGCGCTCGGTATGAAGGACATTCTGTGTATTCAGAAACGTTGCTCTCTCTTATCTCTCTGGCTTTATTAAGATCATGGGCTCATTTTCAGTCCAGTTTAAAGCTCATGAATCTAAACTGCGCAAACAATTCTCAAATTATCTGTGTAATGTGAAAGTActctatttaatataatattttggtaACAATCTTGAGTGAATTGAATACTATTGTATTGAATTATAGCTATACAAGACTATATAAGGACTGTTTGGATGTGACATGTTTGGGGACTCGCTTCTGACATACCAATCAAAAAGTAATATGGAGACCTGTCAATTAGTTTTTAAAGAATCTGAAAgtctaaaaagcaaaacaggTTGGTAGGAATGAAATATCTCGTTACACAGGATGTCCCCCTTAGGCTAATGAACATTACAGAACTTAAACTGAGCAAAAGTGTTTCTGTACAGTTTTTTGGTCTCATCTGCTTGGGTCTCACATCTGATACAAGatgcatataattattttaaaacaatgttttaaaaacaaagtcacGTTTGACCTTTAGACATTCCATAaacaatgattttcttttttgcagcTAAAGGTCGACTTCATCACATGTCTCCAAATTTCATTTATACTATTATTCataagtttggggtcagtaattttatttaaagacaaactGTTCAGTGAAGAAGCTTTAAATAGCTAAAaagtggatttttattttaaatgtctttttgaactttctttttactgaaaacatttaatttcccgtttctgcaaatatataaagctgaaaaacagtgtttattattGTAAGAAGCAATAAGAAGAAATGACTCTTATCATGCCTTTGCAAATATCAATTACAAATAGAAACCTTATGAGTGATAGGCTAATATTTCccaataatactgttttttagTGTATTTCTGATTGAATAAAtccagccttggtgagcaagagagacgttttaaaaatcttaccaaccccaaacttctgatgagtaaagaaaaacaacataacatttaattaagatTCCAAAATGTGTCTATTTAATAAATCTTAGTTTTCAGCTATACTCtttttatttgctgaaaaaagtaaatgtttgtttacacaGTAATGCTTCATGCTCACAAAATAAGTTGCCAGCAGGAAATCTTTTAGAAATACCTTGACTTCAGCATACCATACTCTACTACACCAGGAGGCAGTGCATGCGGTTACCTTGTAAAAGTCTTCCTGTGAGCGGCTGCGCGGTTTGGTGAAGTCATTTCTGAAGCGGTCTCTGGGTTGAGCATTGAACGGCAGTCCAGATGGTGGAGGGGGGGCAGTGGTCTTCAGCACCCCGATGGGGGTGTACAGAGGTTGAGGAGGAATACGTACTGCCTTCCCCCAACCTAGCTTCATTTCAAAACCCATTATTGTTTTAC

Function

NR:

description
PREDICTED: U2 snRNP-associated SURP motif-containing protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53382 True 3744 lncRNA 0.38 2 13708100 13711959

Neighbor

gene id symbol gene type direction distance location
il13ra2 LOC107700247,LOC107746374,LOC107693451,LOC107710577,LOC107548444,LOC107596132 coding downstream 55049 13646648 ~ 13653051 (-)
ftr84 LOC107746428,LOC107700242,LOC107548471,LOC108437047 coding downstream 89743 13612661 ~ 13618357 (-)
kptn kptn coding downstream 139904 13565166 ~ 13568196 (-)
ckma ckma,LOC103045415,LOC107693439,LOC107596144,LOC107700235,LOC107548480,LOC107746363 coding downstream 186532 13517643 ~ 13521568 (-)
rhogc rhogc,LOC107596156,LOC107655911,LOC107548489,LOC107700906,LOC108413814,LOC103046919,LOC105893231 coding downstream 296264 13409262 ~ 13411836 (-)
wdr44 LOC107548463,LOC107700250,LOC107746376 coding upstream 8822 13720781 ~ 13732483 (-)
trnam-cau_26 NA coding upstream 126931 13838890 ~ 13838962 (-)
trnam-cau_27 NA coding upstream 132928 13844887 ~ 13844959 (-)
chrm1b LOC107663375,LOC107548438,LOC107734116,LOC107596191,LOC107746419 coding upstream 226682 13938641 ~ 13940216 (-)
LOC122345582 LOC107548437,LOC107746434,LOC107734131,LOC107596189,LOC107661243 coding upstream 253196 13965155 ~ 13967827 (-)
LOC122345175 NA non-coding downstream 64775 13619026 ~ 13643325 (-)
G36279 NA non-coding downstream 70777 13633670 ~ 13637323 (-)
G36218 LOC108260116 non-coding downstream 144202 13562654 ~ 13563898 (-)
G36227 alkbh6,LOC107746424,LOC107700897,LOC107548452,LOC107655907 non-coding downstream 260981 13446621 ~ 13447119 (-)
G36213 NA non-coding downstream 269996 13380299 ~ 13438104 (-)
G36297 NA non-coding upstream 721 13712680 ~ 13713420 (-)
G36337 NA non-coding upstream 106289 13818248 ~ 13819334 (-)
G36385 LOC107596209,LOC107734118,LOC107661259 non-coding upstream 263393 13975352 ~ 13977070 (-)
G36541 NA non-coding upstream 564137 14276096 ~ 14310067 (-)
G36561 NA non-coding upstream 598665 14310624 ~ 14310860 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other downstream 8874 13654294 ~ 13699226 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other downstream 125810 13579061 ~ 13582290 (-)
G36047 NA other downstream 653243 13053844 ~ 13054857 (-)
G35936 NA other downstream 1202142 12501914 ~ 12505958 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 1388415 12317803 ~ 12319685 (-)
G36298 NA other upstream 5165 13717124 ~ 13718543 (-)
G36336 NA other upstream 105783 13817742 ~ 13818942 (-)
LOC122345901 NA other upstream 133444 13845403 ~ 13848070 (-)
tmprss13b LOC107746439,LOC107663381,LOC107599230 other upstream 289975 14001934 ~ 14009536 (-)
rnf214 LOC107663407,LOC107746393,LOC107599207,LOC107596114,LOC107734124,LOC107661199,LOC107599223 other upstream 329023 14040982 ~ 14056705 (-)

Expression


Co-expression Network