G36230


Basic Information

Item Value
gene id G36230
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13412644 ~ 13414387 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU53392
AAAGATCGAGGATTGCTTAACAATATTTTCCAGCATAGTGAACATCAACAGAAAAATAGCTTTGAGGCCTGTAGTGGTGTTCGAAGAGATCTTGGATTGCATTACGCCCACTTTATGAATACAAGGCCTAACATGCAGAGGTGATTACTGCCagataaactgcatttttacaataaGAATGCAAGTGAGAAGAACGTACATGTCAGCATTTTAGCGTCCTTGCGATGACTGGCCTCTTGCTGTGAGACTGCTTTGATAAGATCCACGTTATGAGAATTTGGTGGATAACATTCCTCATAAGGAGTTTGCCTTTACATAAAATCAAATGTGGCTAAccctttattttacagtgtccttgttacacatttTCCACATGTTTTATGCACTTCCTATAGTAATAATAgtcaattatgcataattacatgcaactaATTCTAAACCAAACCCAAACCATATAGTAAGCacttgttgcttattaatattaatcaccTAGGCGTGTAATTTGACTGTCAAGAGGAcagacttaaaataaagcgtaaccCAAATGTCcaacgaaataaaaatgcaagcacaatgttatataataatttctacATAACACTTACTCCCTAACGCacgttgtgtgtttttgaatgtttgcTCATCCACATGGTGGCATGTCACTTACGATCCACCTTCTCCATCAGGACTGAATGGAGGAAGTCTCTGGGTGTCATGTAAGGCTCCTCTTCGTAGATCATGGAGGCAAACTGGTTAAACCGCAGGCGTCTCATGGACACTAGTGGTGCTGTGATCTCCTCTTCTTCGCGTCCTCCGCGTACACGGTGTGTGGCCACAGTCCCCATCTCggttcatttttaatgtgaataaatCCGCCCGCCACAACAGAGCCCAGAAGACCAGCTCCGACAGCTCCATACCCTATGTTTCGAAGAGGCCAGAAACGTTTTGCCGTATGCCGCAAACTAGCTCCTAACCTGGCCCAAGTCGCCATTATTCTACGGGAAGTTTTTATCAGTCTACTTTGGTCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53392 True 1032 lncRNA 0.42 2 13412644 13414387

Neighbor

gene id symbol gene type direction distance location
rhogc rhogc,LOC107596156,LOC107655911,LOC107548489,LOC107700906,LOC108413814,LOC103046919,LOC105893231 coding downstream 808 13409262 ~ 13411836 (-)
taf1 LOC107746351,LOC107700907,LOC107655912,LOC107757541 coding downstream 4697 13392656 ~ 13407947 (-)
zgc:158432 NA coding downstream 20687 13388012 ~ 13391957 (-)
trnap-agg_13 NA coding downstream 36944 13375629 ~ 13375700 (-)
efnb1 efnb1,LOC107746350,LOC107700912,LOC107548494,LOC107596159,LOC107757535,LOC107655917 coding downstream 108948 13270402 ~ 13303696 (-)
ckma ckma,LOC103045415,LOC107693439,LOC107596144,LOC107700235,LOC107548480,LOC107746363 coding upstream 103256 13517643 ~ 13521568 (-)
kptn kptn coding upstream 150779 13565166 ~ 13568196 (-)
ftr84 LOC107746428,LOC107700242,LOC107548471,LOC108437047 coding upstream 198274 13612661 ~ 13618357 (-)
il13ra2 LOC107700247,LOC107746374,LOC107693451,LOC107710577,LOC107548444,LOC107596132 coding upstream 232261 13646648 ~ 13653051 (-)
wdr44 LOC107548463,LOC107700250,LOC107746376 coding upstream 306394 13720781 ~ 13732483 (-)
G36200 eda,LOC107757537,LOC107700911 non-coding downstream 38889 13370210 ~ 13373755 (-)
G36108 NA non-coding downstream 89422 13322931 ~ 13323222 (-)
G36104 NA non-coding downstream 95182 13317235 ~ 13317462 (-)
G36063 NA non-coding downstream 303696 13108699 ~ 13108948 (-)
G36048 NA non-coding downstream 355939 13055569 ~ 13056705 (-)
G36229 NA non-coding upstream 489 13414876 ~ 13418962 (-)
G36227 alkbh6,LOC107746424,LOC107700897,LOC107548452,LOC107655907 non-coding upstream 32234 13446621 ~ 13447119 (-)
G36218 LOC108260116 non-coding upstream 148267 13562654 ~ 13563898 (-)
LOC122345175 NA non-coding upstream 204639 13619026 ~ 13643325 (-)
G36279 NA non-coding upstream 219283 13633670 ~ 13637323 (-)
G36047 NA other downstream 357787 13053844 ~ 13054857 (-)
G35936 NA other downstream 906686 12501914 ~ 12505958 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 1092959 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 1243234 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 1596700 11795656 ~ 11815944 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 164674 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 239907 13654294 ~ 13699226 (-)
G36298 NA other upstream 302737 13717124 ~ 13718543 (-)
G36336 NA other upstream 403355 13817742 ~ 13818942 (-)
LOC122345901 NA other upstream 431016 13845403 ~ 13848070 (-)

Expression


Co-expression Network