G36406


Basic Information

Item Value
gene id G36406
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14000526 ~ 14003531 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU53655
tgttctttaaaattgtAAGATATTTCACAGAAATTATCTTTTGAGTTTTCTTTTATTGCGAGAGTATACATAGAACATGTGAAAGCAAATTAActatttggcaaaaaaaaaaaaaaaaaaatcttcatttttggtCCTCCTCGGTGAATTACTGATGTGTCCGTTTACCTGCAGAAAGCAGAGCGAGATAACTAGAATTTGGTTATTGAATAACTGGCAATCTTGTCCATCAACATTCTgttaatatacttttatgtGTTGTGAACCCGCATTCAGAGTTTCTGAGATAATGAAGTAAGAGAGAACATGaccttttaaaagtcatttaaaaaagctCTCTTGACAGAAAGTCAtgacatttactttttaaaacatgatgtAATGCTTGCTAGGAATATGCTTGCCAAAAGTGTTACAATGTTAATGCATATGCATGCTCACAGTGAAGGTTAATGAAGGAGAGGTCAAAGATCACCATTGTCTTCAAGCCTACAGAGAAGTCACACCAAGAGGTAAGAGAGGGAGAATGTATGTGTCTTTTATTGTATcttttactatataaatattttatgatccTTACTTAGAAGACGCCTTTTTTCCACAGTTGAGCCTTTTGCCTGCCAGAAAAGAAGATAACATTTGATTATAGAAGGAAAAAAACGATGTGTACGTGCATTCATgtgtttccatttttattataatgtatgcAGAAAGGACATGCTGTGGATTCCATGAATCTAGAGATTCTCACCGAATATGATAACCATGcccaaacagaacaaaacagctGCAAAGATCAGCCCACCTCTTCTGATTAACTCGTAATCTGTCATAAGCGCACACACAGATACTTACAAACAATATATCAACAAAAGTGTTTCGCGCTAATAGTGAAAAAACACAACTTCTATTCACTGGCAGTTTAGAAAAGGACAATTAGTTGCTTAGTTTGAGCTTTATAAAATAAGGCACAGTCAAATGTCCAACATTCATActcacaaaatacacaaatgaatTTATGATCATTTCACAGTTctgtcaatttaatttaaagggtATAATTAAACATCAGACATTCTTACCATAGGTGAAATCAGCATCTGAATACTCGGGTTTTTCACTCCCATCGTTAGCAGTGTTGCAGGATCTCAAAGCTTTCAGGGATGATAATTGCAGAACtgtgatgtatgtgtgtgagggTGTAAGTCAAAGAGGAGTTTGAATGTTTGCAGGAACTCCTTAAACTCTCTTATGGTGGAGTGAATGACAAATCAGTGAGAGCTAAAgggaggagagaaaaagagtgtgCGTTTTGCATATAATGACCTTCAAACCCTTCACTCTAACCCGTCTTATCCAGTAAACCTGAAAACATGCGCATAAACACAGGCCTTTGGGCCATTTCTTAATATCTAACCATTGAGCAGTGGTGAATGTGCCCTTGCAATAAGCTGACAAGGTCATTAAAGCTCATTGAGAAGCAAGAAGACCATGAGAGACAGATTTAATCTCCGAAGGCAAAGATAAATAACTCACgatgcaaaatacaaaaatgatatacacacactgtgtaATAATGTTGATAAATTATATTAAGactgtttatttatctgttaGTTCCCGTTCATTGGGCGGTTAAAAATTAATCTGTAATATTCTAAAggacaaataaaaaagtgtaaaacaaatacataactAAATACCTTAGTTTCATGTGGGTGTATTCGTAAGTTGGAAAGCAaatctgtcataaaaaaatgaccaaTTGAGATATTCTTTCTAAAGATAATGATTATGAATAAGCTGACATGGTTTGGATGAAAAATAACTAATACAGTTTCTTTTAGACAGAATTGGACAGCTTACGTCCAGGCATTTTCAAGATCGGTACAGTAATGTAATCCATGTTTAAGAACattaataaaagttgtttttgcaccatccttatttaaataatgaattaaaaatttagtaaaaatatatatatatatatatactgcaaaaatgtaaatatataaatgtatatatacaaaaatgtccCTTTAAAAGgagtaaatgtattaaaatacagtaatgtgtgttttttgttgttgaaagaacataaaacatttatttataattcatttacaatagtcacaaagacttttttttttttgcatcttccttacctcatttgtacgtcgctttggataaaagcgtctgctaaatgactaaatgtaaatgtatttaaataatgatttaaaaattttacatacatacatatttatatatatattctccaAACATGCATGTCACTGTCTGCTGTGTcactttacaaaaaataagatAACTTATTTCAGTACAtaaatttataattgtttacaGAATGTAAAGATTTGTTCTTCATTGTTGTAGAAGGTCATGGTCGCTCTTGCTGTAATTAAGGAAATGGAGCCAGAAAGAAACATGGATAGAAATCGTAAGATTGTTTGTAAAGGAAATATGATAACTCATGATAAACAatattatgtatgtttgtaaaaatgcatgtgaaatatgtatgtaaaaatgcaaaagtgtTTACCTGCATCTTGCCATATATCCACATTAAAAGTTGCCCTACGTCAGTGTAGACTCCTGGATTGTTGGGCTTTCCACAGCCATTTCCCCAACTTGTTATGCCTGCGAGATACCATTTGTCATCAACTTTACATACCAGTGGACCTCCACTGTCCC

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation
ko04672 Intestinal immune network for IgA production
ko05310 Asthma
ko05321 Inflammatory bowel disease
ko05330 Allograft rejection

RNA

RNA id representative length rna type GC content exon number start site end site
TU53655 True 2715 lncRNA 0.33 2 14000526 14003531

Neighbor

gene id symbol gene type direction distance location
panx1b panx1b,LOC107746435,LOC107663420,LOC107734119,LOC107548450,LOC107596208 coding upstream 16798 13978210 ~ 13983728 (+)
epd LOC107596209,LOC107661259,LOC107734118,LOC107663416 coding upstream 23506 13975414 ~ 13977020 (+)
myo1ca LOC107746384,LOC107548455,LOC107663411,LOC107734145 coding upstream 35487 13944782 ~ 13965039 (+)
dpf2 dpf2,LOC107596122,LOC107548457,LOC107734150,LOC107746382 coding upstream 63195 13926712 ~ 13937331 (+)
cdc42ep2 LOC107548458,LOC107663424,LOC107746383,LOC107734144,LOC107661192 coding upstream 76613 13916335 ~ 13923913 (+)
tmprss4b LOC107599211,LOC107663417,LOC107746388,LOC107734130,LOC107661196,LOC107596117 coding downstream 6792 14010323 ~ 14014376 (+)
pafah1b2 pafah1b2,LOC107661198,LOC107734127,LOC107663423,LOC107599209,LOC107746392 coding downstream 29916 14033447 ~ 14037169 (+)
apoa1a LOC107663408,LOC107599208,LOC107746394,LOC107661262,LOC107734125,LOC107596115 coding downstream 35439 14038970 ~ 14041059 (+)
LOC122344888 LOC107746395 coding downstream 53732 14057263 ~ 14059780 (+)
si:ch211-284e13.5 LOC107746441,LOC107599206,LOC107661202 coding downstream 84900 14088431 ~ 14092482 (+)
G36405 NA non-coding upstream 189 13999100 ~ 14000337 (+)
G36332 NA non-coding upstream 25767 13974532 ~ 13974759 (+)
G36198 NA non-coding upstream 268070 13731969 ~ 13732456 (+)
G36191 NA non-coding upstream 278960 13720785 ~ 13721566 (+)
G36168 NA non-coding upstream 351988 13647926 ~ 13648538 (+)
G36408 LOC107746439,LOC107663381,LOC107599230 non-coding downstream 2240 14005771 ~ 14007402 (+)
G36420 LOC107663407,LOC107599223,LOC107746393,LOC107661199 non-coding downstream 43246 14046777 ~ 14047494 (+)
G36503 LOC107599196,LOC107663386 non-coding downstream 318025 14321556 ~ 14326754 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding downstream 338392 14341923 ~ 14342507 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding downstream 339633 14343164 ~ 14343769 (+)
ins ins,LOC107596207 other upstream 14820 13984097 ~ 13985706 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 1193175 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 1295281 12703352 ~ 12705245 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 1471736 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 1744854 12249138 ~ 12255672 (+)
G36495 NA other downstream 286889 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 296512 14300043 ~ 14305304 (+)
LOC122345214 NA other downstream 329492 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 344031 14347562 ~ 14349991 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 642414 14645945 ~ 14652911 (+)

Expression


Co-expression Network