G36420 (LOC107663407,LOC107599223,LOC107746393,LOC107661199)


Basic Information

Item Value
gene id G36420
gene name LOC107663407,LOC107599223,LOC107746393,LOC107661199
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14046777 ~ 14047494 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU53675
TCTACCAATATCTACTAAATGAACCTCAAGAcatcaaatcatttaatttgCTGAATGTGACCTTTAATGAGTTCAACATTACAAACAATTGATTAAAcctgcaaataaatatttttttatattaaaaagtataaaaaattacttagaacataaaaaaaaaaaaggtcaaaactCCCAAACTGTCCAACAAGTTTTGCTATACATTCCAGTTTGTGGCTTTCATCAGACATCTTAAATCATACACCAAATCATACAGTGATATTTGCAGTATAGGTTTCTGATGAAAGCTACAAGCTAAAAAGCACTGGTCTTACGATAAAGTTGTTTAATATCCTACAAGTTATGCTGGAGTTTTGACCTCTTTGGACACAGTGTAGGTATTTCTTGCACAACTTCACCTACCTCAAAAGTCAAATGGAAGAAAGGGctattgtaaacaaaacaatgccATACCAGGGAGTTGATAATCTTCATATTATTTGTACTGCAAACTCTTTTTATAAGCTGTAATACGGTTATATATGAAGAATTTCACATTCTTCCAGTCCCGGTTCCTTAGAGCTTCTGGTTCAGCCTTTAAACACTTCTCACAGTCAGTCTTTCCCGGTACAGTAAATGATGTGATGAATCGCATCATGTGTCTTTCCACTGCCTGCACCTCTGTCTGCTGCCAGGGATTTTTCTTATGGGTAGTTTGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107663407 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53675 True 698 lncRNA 0.35 2 14046777 14047494

Neighbor

gene id symbol gene type direction distance location
apoa1a LOC107663408,LOC107599208,LOC107746394,LOC107661262,LOC107734125,LOC107596115 coding upstream 5718 14038970 ~ 14041059 (+)
pafah1b2 pafah1b2,LOC107661198,LOC107734127,LOC107663423,LOC107599209,LOC107746392 coding upstream 9608 14033447 ~ 14037169 (+)
tmprss4b LOC107599211,LOC107663417,LOC107746388,LOC107734130,LOC107661196,LOC107596117 coding upstream 32401 14010323 ~ 14014376 (+)
panx1b panx1b,LOC107746435,LOC107663420,LOC107734119,LOC107548450,LOC107596208 coding upstream 63049 13978210 ~ 13983728 (+)
epd LOC107596209,LOC107661259,LOC107734118,LOC107663416 coding upstream 69757 13975414 ~ 13977020 (+)
LOC122344888 LOC107746395 coding downstream 9769 14057263 ~ 14059780 (+)
si:ch211-284e13.5 LOC107746441,LOC107599206,LOC107661202 coding downstream 40937 14088431 ~ 14092482 (+)
hsd20b2 hsd20b2,LOC107596111,LOC107661247,LOC107734140,LOC107663385 coding downstream 76615 14124109 ~ 14130049 (+)
gnb2 gnb2,LOC107663406,LOC108428986,LOC107661206,LOC107746402 coding downstream 98475 14145969 ~ 14156534 (+)
gltpd2b LOC107663399,LOC107746407,LOC107734136,LOC107661211,LOC107596106,LOC107580519 coding downstream 174106 14221600 ~ 14225996 (+)
G36408 LOC107746439,LOC107663381,LOC107599230 non-coding upstream 39375 14005771 ~ 14007402 (+)
G36406 NA non-coding upstream 43246 14000526 ~ 14003531 (+)
G36405 NA non-coding upstream 46440 13999100 ~ 14000337 (+)
G36332 NA non-coding upstream 72018 13974532 ~ 13974759 (+)
G36198 NA non-coding upstream 314321 13731969 ~ 13732456 (+)
G36503 LOC107599196,LOC107663386 non-coding downstream 274062 14321556 ~ 14326754 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding downstream 294429 14341923 ~ 14342507 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding downstream 295670 14343164 ~ 14343769 (+)
G36510 NA non-coding downstream 298390 14345884 ~ 14346835 (+)
G36573 NA non-coding downstream 418405 14465899 ~ 14466241 (+)
ins ins,LOC107596207 other upstream 61071 13984097 ~ 13985706 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 1239426 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 1341532 12703352 ~ 12705245 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 1517987 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 1791105 12249138 ~ 12255672 (+)
G36495 NA other downstream 242926 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 252549 14300043 ~ 14305304 (+)
LOC122345214 NA other downstream 285529 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 300068 14347562 ~ 14349991 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 598451 14645945 ~ 14652911 (+)

Expression


Co-expression Network