G36570


Basic Information

Item Value
gene id G36570
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14493548 ~ 14528933 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU53931
tcaaaccttttattaaaagaactATCAAAAAAACTGCAGTTAAAAAAGGACAACGTTACGGTTTATTCAATAACAGATATCCCAACATATTACCaaccaaataaattaaaatgttacattaagcATCATGATTCATTAACAGCACATCACCCTACCATTAAgcactaaaaacacacattttgccatttaaaaaaatgcaattgtacCGCTGTACAGTTCACTATTGTAAGgcagaaaatgaacaaaacaagtAGCTTTCACATTAGAACCTTTTGACTTGATACAGCAACAGATTACACAAAGATCAAATTCAATACAGATTAgtgttaaatgcattaattgtaTGGAAGGATTTTTAAATTGCCATTGTTAACAACAAACTTAGCAAAAGCAAATGGTAAACGGGTCGACTCTCCACATCAACATAATACACTCAAAATACGTTTTGTTtttttttgta

Function

GO:

id name namespace
GO:0016071 mRNA metabolic process biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0043170 macromolecule metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53931 True 460 lncRNA 0.30 2 14493548 14528933

Neighbor

gene id symbol gene type direction distance location
bmp2k bmp2k,LOC107752364,LOC107746780,LOC107599185,LOC107661221 coding upstream 77 14466508 ~ 14493471 (+)
LOC122345511 LOC107663395,LOC107599216,LOC107567471,LOC107752366,LOC107752365,LOC107661220 coding upstream 29827 14459454 ~ 14463721 (+)
LOC122345512 LOC107752366,LOC107661220,LOC107663395,LOC107599216,LOC107663363,LOC107746851 coding upstream 34634 14455417 ~ 14458914 (+)
fras1 fras1,LOC107663364,LOC107661219,LOC107752371,LOC107746850 coding upstream 38264 14385667 ~ 14455284 (+)
LOC122344908 LOC107599196,LOC107663386 coding upstream 166781 14324343 ~ 14326767 (+)
prdm8b prdm8,prdm8b,LOC107744860,LOC107746783,LOC107661225,LOC107663390 coding downstream 101989 14630922 ~ 14635776 (+)
cfap299 si:ch211-57h10.1,LOC107602013,LOC107599193,LOC107746788,LOC107663380,LOC107661266 coding downstream 125668 14654601 ~ 14699071 (+)
bmp3 LOC107663379,LOC107599191,LOC107746787,LOC107744876 coding downstream 171971 14700904 ~ 14706295 (+)
tmem175 LOC107746789,LOC107663387,LOC107599180,LOC107661229,LOC107744865,LOC107602030 coding downstream 261933 14790866 ~ 14794659 (+)
cspg4ba si:dkey-193c22.2,LOC107746793,LOC107681276,LOC107744873,LOC107599179,LOC107602029 coding downstream 351942 14880875 ~ 14898825 (+)
G36573 NA non-coding upstream 27307 14465899 ~ 14466241 (+)
G36510 NA non-coding upstream 146713 14345884 ~ 14346835 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding upstream 149779 14343164 ~ 14343769 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding upstream 151041 14341923 ~ 14342507 (+)
G36503 LOC107599196,LOC107663386 non-coding upstream 166794 14321556 ~ 14326754 (+)
G36644 NA non-coding downstream 198296 14727229 ~ 14727743 (+)
G36653 NA non-coding downstream 249028 14777961 ~ 14778375 (+)
G36651 wdfy3,LOC107681281,LOC107661255,LOC107744871,LOC107599213 non-coding downstream 283540 14812473 ~ 14815463 (+)
G36657 NA non-coding downstream 288806 14817739 ~ 14818269 (+)
G36692 hspb3,LOC107746796,LOC107599178,LOC107744878,LOC107602000 non-coding downstream 390022 14918955 ~ 14919941 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 143557 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 155783 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 188244 14300043 ~ 14305304 (+)
G36495 NA other upstream 201048 14290420 ~ 14292500 (+)
ins ins,LOC107596207 other upstream 507842 13984097 ~ 13985706 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 117012 14645945 ~ 14652911 (+)
G36640 NA other downstream 189599 14718532 ~ 14720487 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 1862864 16391797 ~ 16395562 (+)
G37227 NA other downstream 1945775 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 1957687 16486620 ~ 16561741 (+)

Expression


Co-expression Network