G36653


Basic Information

Item Value
gene id G36653
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14777961 ~ 14778375 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU54029
TCGAACATCGGAGATGCTCCTTTCTCGGGCAGCGTACATCCCAGAAGCTCTGCGAGGAACTTTGCCATATAAATGTGCGTGGTGTGTTTCGCCGGTAGATTGAAAACGCCGCTGGCTGCCAGGCTGTTTCTTACCCTCACTACAGTGCCCACAGGTAGTCTTGTTCCGGCAGCGGTTTCCTACAGCACAGCAGACCGATTTTTCGCTCCTTGGACTTTCCTTTCAGCATTTCTTTGACTCCGAACGGATAGGATTCGTGTGAAAGGTGTGACAGCTCATCGTCTTTGTCTAGTCAAGAGCGCGTGTCTGTGTACAGCGGCTCGCGAACGAAGCGGAGACGAGCTCATTGAAAGCCACTTGTAATCCTCGTGTAGGGGAGGGGGAGGAATCGCTGAGGCGCAGATGTAAAGCTCCG

Function

GO: NA

KEGG:

id description
ko04020 Calcium signaling pathway
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU54029 True 415 lncRNA 0.53 1 14777961 14778375

Neighbor

gene id symbol gene type direction distance location
bmp3 LOC107663379,LOC107599191,LOC107746787,LOC107744876 coding upstream 71666 14700904 ~ 14706295 (+)
cfap299 si:ch211-57h10.1,LOC107602013,LOC107599193,LOC107746788,LOC107663380,LOC107661266 coding upstream 78890 14654601 ~ 14699071 (+)
prdm8b prdm8,prdm8b,LOC107744860,LOC107746783,LOC107661225,LOC107663390 coding upstream 142185 14630922 ~ 14635776 (+)
bmp2k bmp2k,LOC107752364,LOC107746780,LOC107599185,LOC107661221 coding upstream 284490 14466508 ~ 14493471 (+)
LOC122345511 LOC107663395,LOC107599216,LOC107567471,LOC107752366,LOC107752365,LOC107661220 coding upstream 314240 14459454 ~ 14463721 (+)
tmem175 LOC107746789,LOC107663387,LOC107599180,LOC107661229,LOC107744865,LOC107602030 coding downstream 12491 14790866 ~ 14794659 (+)
cspg4ba si:dkey-193c22.2,LOC107746793,LOC107681276,LOC107744873,LOC107599179,LOC107602029 coding downstream 102500 14880875 ~ 14898825 (+)
arl15a arl15a,LOC107599176,LOC107681238,LOC107746795,LOC107661232,LOC107602028,LOC107708616 coding downstream 143197 14921572 ~ 14999417 (+)
ndufs4 ndufs4,LOC107708631,LOC107661235,LOC107602025,LOC107599174,LOC107746797 coding downstream 228232 15006607 ~ 15016753 (+)
si:dkey-3h3.3 LOC107681178 coding downstream 392686 15171061 ~ 15173837 (+)
G36644 NA non-coding upstream 50218 14727229 ~ 14727743 (+)
G36570 NA non-coding upstream 249028 14493548 ~ 14528933 (+)
G36573 NA non-coding upstream 311720 14465899 ~ 14466241 (+)
G36510 NA non-coding upstream 431126 14345884 ~ 14346835 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding upstream 434192 14343164 ~ 14343769 (+)
G36651 wdfy3,LOC107681281,LOC107661255,LOC107744871,LOC107599213 non-coding downstream 34098 14812473 ~ 14815463 (+)
G36657 NA non-coding downstream 39364 14817739 ~ 14818269 (+)
G36692 hspb3,LOC107746796,LOC107599178,LOC107744878,LOC107602000 non-coding downstream 140580 14918955 ~ 14919941 (+)
G36732 NA non-coding downstream 250482 15028857 ~ 15029133 (+)
G36737 LOC107661270 non-coding downstream 348611 15126986 ~ 15128178 (+)
G36640 NA other upstream 57474 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 125050 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 427970 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 440196 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 472657 14300043 ~ 14305304 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 1613422 16391797 ~ 16395562 (+)
G37227 NA other downstream 1696333 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 1708245 16486620 ~ 16561741 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 2586474 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 2747649 17526024 ~ 17527444 (+)

Expression


Co-expression Network