cenpv (cenpv,LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586)


Basic Information

Item Value
gene id cenpv
gene name cenpv,LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15703533 ~ 15709430 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU54499
TTTGAGACACATCGACCTCAGACATGTTGCCTGCCGTATCTGTTGCAGCAATGTAGGTCATTTTCTCTGGCAGCTGAACGGGAGGAACCAGATGACGCCGAGGGCGAAATGAGCTGGCAGAAGCATGTGACCCGGCCAGTCAACAGAGCTGCTTCTGTTTTGCAAGCGGCAGTGTTGGTTATCAACAAAGTATGGAATGTTCTACATGAGAGCGTGACTTAACTGTTTAAACCGGTCAGGTTGAAGACGACGAGCAACCCCAGTTTACCACACATTAAGTTAGAAGTGCTAAACGAATGGCGTGCGTAACTAAAGACAAAAGGGAGCGTGATGGTCTTGTGAAACACACCGGAGGCTGTCACTGTGGCGCGGTGCGTTTTGAGGTGTGGAGCTCTCCAGATTTACACGTGTTCAATTGCAATTGCAGTATTTGCACAAAGAAACAGAATCGCCACTTCATTGTGCCAAAATCCCAGTTCACCTTGCTGCAGGGATCAGACAACATAACCGCGtacacatttaacacacacGTGGCCAAGCACACATTCTGCAAAACGTGTGGCGTCCAGAGCTTCTACATGCCACGTTCCAACCCTGATGGATTTGgTGTGGCACCTCACTGTTTGGACCCTGGAACAGTGAGCAGTGTCACTGTAGAAGACTTCTTTGGACAGAACTGGGAGGAAAGCATGCAGAAGCATCAAACTATAAGAAGtatgtcaaaaacaacaacagacacATGACGTCTATCTATGTTTCTATCGCCCAGTTGAGCCCTATGACTTAATTGTACTCTCCTGCTTCTCAAGGCAGTTATTActgatatattaaaatcatgaaTCAAACTTTAACTTTTGAGACACCTACTGTAATGTACATCAAATCActtaacaaatatacacatctACAAAAAGATACTGAaccaaaaatattgattaatcaATTTGTATACATGATACAGGTATACACAGGTAATCTCCCCCTAAAttacatgatttttacttaaaggaatagttcacccaaaaaatgtaaaattatggcatattttactcacccccaagccatccaagagtatatgactttcttggctgacctctgacttgACGTTATGTTATACATCATACAACTCAGATTgcgttcgtctgaaagaagaaagtctcATACACccaggatggcttgggggtgagtaaaatatggcatcattttaatttttaggtgaactattcctttaaggaatGTATGGacatataatatgaaaaaacatTGCCAAAACTGAATGGAAAACATAGTAACAGACATTTGTGAGAAGGAGATGAAGATTTTGAATGATATATACCCCATGTTTGTATTGTGTTAGCATTTGTTTGAGAGTGTCAGATATGAGGaaaactaattaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtatatgtccATCGTTTTTCTctttatcaattttattttaaacaaaattattacattGCTCTACATTAGAAGTCATTACAGAATATACTAACAGAGTTACAGACTTCACTCAAGGAAATCAGAAAAACATGTCAGTTTTGAAAACATACTGAATCATAAGATTTGGTACAGTACTTGTTTATCCATTTGGAACAGTGCTTTTCTTGGAAGTCtactttaataaatcaataacatTAACAACAACATCTAATAACAACagtaacagaaaatgtaaacgaTGTACAGAATCACATTTCGTGCTTCACCACCTTTAAACTCAAAGGCACAATCTGTGTTTTGGATTTAACTACTCAAATAAAGCGCTTAAGTCCCCTAAACCTCCCAGGAAATCTGGCTTTCAGAACATTGTATTGTTTGGTATAAAAGTCTCTAAGGTTCATTATACCAGCAGTTCTCCGTTAGTGTCTGTAGGCTGGATATGCTGACTGAACCTTATTGATATATTGTTGTAcagtctttatatatatatatatatatatatatatatatatatatatataatataaatatataaacaaattaattataaacaaaGTAAACCTTTGTTTAAAATTTCAGTGCATAATTTTAGTCCTACATGGACAGGAACAGTGCCCAAGACAATCTAAGCTAATAAATCTTCACATTCTTTGTTTCCACGGTGATGGCCTGGAATGTGTTTACAAACATGTAGCGTGAGAAAAGTATGTAGAGTCGGCGAAACCACAGCAGCTGAGAGCGATGACAGAGCATGGCTTTCTGAGGAAGGAAGAGGAGGACAAGAGTAGATAACTGTATGGAGATATATCTTTTTTatatgacatgttttaagataacctaaagaaaataaatagatgaaCTGACTCAATATGACAAACACAGCAGGGCTGAACGTTCAATCATCTGCACGCTACTGTAAAAGGAGCCAGACTGGTAAGACCAGTTCAGGCTTCGGCGGGTCAGACAGGATTAGTTCATGTTCACAGTAAAGGTTCAAAGTACCAATGTGTTAATCAGCAACATAGAAAAACATGAGCTTTTCAGTTATGCTCGTAAGTTATGAATGCTCTGTATTTATTCGTAGTCATTAAGTGTCTCGTTTGGGAATACATCTGAAAACAGTCGAACTGTAAAACTTGCAGATTGATGCCAGAAAGGTTTGTAAGTAATATCTGATCATTTCTAATTACTTGTACTGATCCAGGGCGTGTCGAATTTCAGTTCAGGAATCATTAAAGTATAATCAGAGTGTAAGCTCTTTGTTTAAACACGACTGATGATGCACCTTGGCACGGTTATACTCATCCTGTCCAATGATGCAGCAGAAATCAGAGGGGAGGAGCCAGCTGATGGGCAGCTCTAGGACTGACACGTACTTTCTAAGTAAGCTGATGGAGTGAAGAGAGAAGATCTGACA
>TU54502
TTTGAGACACATCGACCTCAGACATGTTGCCTGCCGTATCTGTTGCAGCAATGTAGGTCATTTTCTCTGGGGAGCGTGATGGTCTTGTGAAACACACCGGAGGCTGTCACTGTGGCGCGGTGCGTTTTGAGGTGTGGAGCTCTCCAGATTTACACGTGTTCAATTGCAATTGCAGTATTTGCACAAAGAAACAGAATCGCCACTTCATTGTGCCAAAATCCCAGTTCACCTTGCTGCAGGGATCAGACAACATAACCGCGtacacatttaacacacacGTGGCCAAGCACACATTCTGCAAAACGTGTGGCGTCCAGAGCTTCTACATGCCACGTTCCAACCCTGATGGATTTGgTGTGGCACCTCACTGTTTGGACCCTGGAACAGTGAGCAGTGTCACTGTAGAAGACTTCTTTGGACAGAACTGGGAGGAAAGCATGCAGAAGCATCAAACTATAAGAAGtatgtcaaaaacaacaacagacacATGACGTCTATCTATGTTTCTATCGCCCAGTTGAGCCCTATGACTTAATTGTACTCTCCTGCTTCTCAAGGCAGTTATTActgatatattaaaatcatgaaTCAAACTTTAACTTTTGAGACACCTACTGTAATGTACATCAAATCActtaacaaatatacacatctACAAAAAGATACTGAaccaaaaatattgattaatcaATTTGTATACATGATACAGGTATACACAGGTAATCTCCCCCTAAAttacatgatttttacttaaaggaatagttcacccaaaaaatgtaaaattatggcatattttactcacccccaagccatccaagagtatatgactttcttggctgacctctgacttgACGTTATGTTATACATCATACAACTCAGATTgcgttcgtctgaaagaagaaagtctcATACACccaggatggcttgggggtgagtaaaatatggcatcattttaatttttaggtgaactattcctttaaggaatGTATGGacatataatatgaaaaaacatTGCCAAAACTGAATGGAAAACATAGTAACAGACATTTGTGAGAAGGAGATGAAGATTTTGAATGATATATACCCCATGTTTGTATTGTGTTAGCATTTGTTTGAGAGTGTCAGATATGAGGaaaactaattaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtatatgtccATCGTTTTTCTctttatcaattttattttaaacaaaattattacattGCTCTACATTAGAAGTCATTACAGAATATACTAACAGAGTTACAGACTTCACTCAAGGAAATCAGAAAAACATGTCAGTTTTGAAAACATACTGAATCATAAGATTTGGTACAGTACTTGTTTATCCATTTGGAACAGTGCTTTTCTTGGAAGTCtactttaataaatcaataacatTAACAACAACATCTAATAACAACagtaacagaaaatgtaaacgaTGTACAGAATCACATTTCGTGCTTCACCACCTTTAAACTCAAAGGCACAATCTGTGTTTTGGATTTAACTACTCAAATAAAGCGCTTAAGTCCCCTAAACCTCCCAGGAAATCTGGCTTTCAGAACATTGTATTGTTTGGTATAAAAGTCTCTAAGGTTCATTATACCAGCAGTTCTCCGTTAGTGTCTGTAGGCTGGATATGCTGACTGAACCTTATTGATATATTGTTGTAcagtctttatatatatatatatatatatatatatatatatatatatataatataaatatataaacaaattaattataaacaaaGTAAACCTTTGTTTAAAATTTCAGTGCATAATTTTAGTCCTACATGGACAGGAACAGTGCCCAAGACAATCTAAGCTAATAAATCTTCACATTCTTTGTTTCCACGGTGATGGCCTGGAATGTGTTTACAAACATGTAGCGTGAGAAAAGTATGTAGAGTCGGCGAAACCACAGCAGCTGAGAGCGATGACAGAGCATGGCTTTCTGAGGAAGGAAGAGGAGGACAAGAGTAGATAACTGTATGGAGATATATCTTTTTTatatgacatgttttaagataacctaaagaaaataaatagatgaaCTGACTCAATATGACAAACACAGCAGGGCTGAACGTTCAATCATCTGCACGCTACTGTAAAAGGAGCCAGACTGGTAAGACCAGTTCAGGCTTCGGCGGGTCAGACAGGATTAGTTCATGTTCACAGTAAAGGTTCAAAGTACCAATGTGTTAATCAGCAACATAGAAAAACATGAGCTTTTCAGTTATGCTCGTAAGTTATGAATGCTCTGTATTTATTCGTAGTCATTAAGTGTCTCGTTTGGGAATACATCTGAAAACAGTCGAACTGTAAAACTTGCAGATTGATGCCAGAAAGGTTTGTAAGTAATATCTGATCATTTCTAATTACTTGTACTGATCCAGGGCGTGTCGAATTTCAGTTCAGGAATCATTAAAGTATAATCAGAGTGTAAGCTCTTTGTTTAAACACGACTGATGATGCACCTTGGCACGGTTATACTCATCCTGTCCAATGATGCAGCAGAAATCAGAGGGGAGGAGCCAGCTGATGGGCAGCTCTAGGACTGACACGTACTTTCTAAGTAAGCTGATGGAGTGAAGAGAGAAGATCTGACA
>XM_043240511.1
GCACTTAATATAGAACGCAATGTGTGACACAGATGGCATTTCTTTGAGACACATCGACCTCAGACATGTTGCCTGCCGTATCTGTTGCAGCAATGTAGGTCATTTTCTCTGGCAGCTGAACGGGAGGAACCAGATGACGCCGAGGGCGAAATGAGCTGGCAGAAGCATGTGACCCGGCCAGTCAACAGAGCTGCTTCTGTTTTGCAAGCGGCAGTGTTGGTTATCAACAAAGTATGGAATGTTCTACATGAGAGCGTGACTTAACTGTTTAAACCGGTCAGGTTGAAGACGACGAGCAACCCCAGTTTACCACACATTAAGTTAGAAGTGCTAAACGAATGGCGTGCGTAACTAAAGACAAAAGGGAGCGTGATGGTCTTGTGAAACACACCGGAGGCTGTCACTGTGGCGCGGTGCGTTTTGAGGTGTGGAGCTCTCCAGATTTACACGTGTTCAATTGCAATTGCAGTATTTGCACAAAGAAACAGAATCGCCACTTCATTGTGCCAAAATCCCAGTTCACCTTGCTGCAGGGATCAGACAACATAACCGCGtacacatttaacacacacGTGGCCAAGCACACATTCTGCAAAACGTGTGGCGTCCAGAGCTTCTACATGCCACGTTCCAACCCTGATGGATTTGgTGTGGCACCTCACTGTTTGGACCCTGGAACAGTGAGCAGTGTCACTGTAGAAGACTTCTTTGGACAGAACTGGGAGGAAAGCATGCAGAAGCATCAAACTATAAGAACAGAAATCAGAGGGGAGGAGCCAGCTGATGGGCAGCTCTAGGACTGACACGTACTTTCTAAGTAAGCTGATGGAGTGAAGAGAGAAGATCTGACAACCTGTGGACACAGACAGattctttttttgggggggggggttAAGGTTTCCACGTTTTCATCAATGAACAGGCCATTTCTAAGGCTTTTACAgctatttcttattattataagttttaCATAAATCTACATGCTACCGAAGATATTTactaaatgaaactgaaaaaaatacacagtaatacaacaattaacaaaaaaatgaaaataagttgACCTGGAC
>XM_043240512.1
GCACTTAATATAGAACGCAATGTGTGACACAGATGGCATTTCTTTGAGACACATCGACCTCAGACATGTTGCCTGCCGTATCTGTTGCAGCAATGTAGGTCATTTTCTCTGGCAGCTGAACGGGAGGAACCAGATGACGCCGAGGGCGAAATGAGCTGGCAGAAGCATGTGACCCGGCCAGTCAACAGAGCTGCTTCTGTTTTGCAAGCGGCAGTGTTGGTTATCAACAAAGTATGGAATGTTCTACATGAGAGCGTGACTTAACTGTTTAAACCGGTCAGGTTGAAGACGACGAGCAACCCCAGTTTACCACACATTAAGTTAGAAGTGCTAAACGAATGGCGTGCGTAACTAAAGACAAAAGGGAGCGTGATGGTCTTGTGAAACACACCGGAGGCTGTCACTGTGGCGCGGTGCGTTTTGAGGTGTGGAGCTCTCCAGATTTACACGTGTTCAATTGCAATTGCAGTATTTGCACAAAGAAACAGAATCGCCACTTCATTGTGCCAAAATCCCAGTTCACCTTGCTGCAGGGATCAGACAACATAACCGCGtacacatttaacacacacGTGGCCAAGCACACATTCTGCAAAACGTGTGGCGTCCAGAGCTTCTACATGCCACGTTCCAACCCTGATGGATTTGgTGTGGCACCTCACTGTTTGGACCCTGGAACAGTGAGCAGTGTCACTGTAGAAGACTTCTTTGGACAGAACTGGGAGGAAAGCATGCAGAAGCATCAAACTATAAGAAAAATCAGAGGGGAGGAGCCAGCTGATGGGCAGCTCTAGGACTGACACGTACTTTCTAAGTAAGCTGATGGAGTGAAGAGAGAAGATCTGACAACCTGTGGACACAGACAGattctttttttgggggggggggttAAGGTTTCCACGTTTTCATCAATGAACAGGCCATTTCTAAGGCTTTTACAgctatttcttattattataagttttaCATAAATCTACATGCTACCGAAGATATTTactaaatgaaactgaaaaaaatacacagtaatacaacaattaacaaaaaaatgaaaataagttgACCTGGAC
>XM_043240513.1
CACTTAATATAGAACGCAATGTGTGACACAGATGGCATTTCTTTGAGACACATCGACCTCAGACATGTTGCCTGCCGTATCTGTTGCAGCAATGTAGGTCATTTTCTCTGGCAGCTGAACGGGAGGAACCAGATGACGCCGAGGGCGAAATGAGCTGGCAGAAGCATGTGACCCGGCCAGTCAACAGAGCTGCTTCTGTTTTGCAAGCGGCAGTGTTGGTTATCAACAAAGTATGGAATGTTCTACATGAGAGCGTGACTTAACTGTTTAAACCGGTCAGGTTGAAGACGACGAGCAACCCCAGTTTACCACACATTAAGTTAGAAGTGCTAAACGAATGGCGTGCGTAACTAAAGACAAAAGGGAGCGTGATGGTCTTGTGAAACACACCGGAGGCTGTCACTGTGGCGCGGTGCGTTTTGAGGTGTGGAGCTCTCCAGATTTACACGTGTTCAATTGCAATTGCAGTATTTGCACAAAGAAACAGAATCGCCACTTCATTGTGCCAAAATCCCAGTTCACCTTGCTGCAGGGATCAGACAACATAACCGCGtacacatttaacacacacGTGGCCAAGCACACATTCTGCAAAACGTGTGGCGTCCAGAGCTTCTACATGCCACGTTCCAACCCTGATGGATTTGgTGTGGCACCTCACTGTTTGGACCCTGGAACAGTGAGCAGTGTCACTGTAGAAGACTTCTTTGGACAGAACTGGGAGGAAAGCATGCAGAAGCATCAAACTATAAGAACGTGAGAAAAGTATGTAGAGTCGGCGAAACCACAGCAGCTGAGAGCGATGACAGAGCATGGCTTTCTGAGGAAGGAAGAGGAGGACAAGAGTAGATAACTGTATGGAGATATATCTTTTTTatatga

Function

symbol description
cenpv Predicted to enable carbon-sulfur lyase activity and metal ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in head; motor neurons; muscle; retinal outer nuclear layer; and trunk musculature. Orthologous to human CENPV (centromere protein V).

NR:

description
centromere protein V isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016846 carbon-sulfur lyase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54499 True 2936 TUCP 0.37 6 15703752 15709388
TU54502 False 2684 lncRNA 0.36 5 15703752 15709388
XM_043240511.1 False 1070 mRNA 0.45 7 15703533 15709430
XM_043240512.1 False 1067 mRNA 0.45 7 15703533 15709430
XM_043240513.1 False 882 mRNA 0.47 7 15704348 15709429

Neighbor

gene id symbol gene type direction distance location
ncor1 ncor1,LOC107676644,LOC107746860,LOC107553567,LOC107680951,LOC107552540 coding downstream 19097 15616601 ~ 15684436 (-)
LOC122345891 NA coding downstream 87071 15614467 ~ 15616462 (-)
LOC122345011 NA coding downstream 92439 15605437 ~ 15611094 (-)
si:dkey-65b12.6 LOC107746818,LOC107680961,LOC107552589 coding downstream 99201 15589884 ~ 15604332 (-)
atxn2 LOC107746814,LOC107680995,LOC107552590,LOC107708645,LOC107676658 coding downstream 148847 15534694 ~ 15554686 (-)
flot2a flot2,flot2a,LOC107746832,LOC107676660 coding upstream 112439 15821869 ~ 15838717 (-)
LOC122345699 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 coding upstream 133563 15842993 ~ 15843844 (-)
LOC122345991 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 coding upstream 140391 15849821 ~ 15850648 (-)
grsf1 grsf1,LOC107746834,LOC107680726,LOC107579879 coding upstream 166163 15875593 ~ 15878477 (-)
si:dkey-245n4.2 si:dkey-245n4.2,LOC107746839,LOC107580348 coding upstream 205934 15915364 ~ 15922607 (-)
G36969 NA non-coding downstream 138271 15564098 ~ 15565262 (-)
G36968 NA non-coding downstream 141170 15562148 ~ 15562363 (-)
G36967 NA non-coding downstream 141455 15561722 ~ 15562078 (-)
G36811 NA non-coding downstream 534175 15169047 ~ 15169358 (-)
G36714 NA non-coding downstream 797912 14905385 ~ 14905621 (-)
G36986 NA non-coding upstream 4245 15713675 ~ 15713975 (-)
G37067 NA non-coding upstream 19773 15729203 ~ 15729893 (-)
G37076 NA non-coding upstream 38092 15747522 ~ 15749497 (-)
G37079 NA non-coding upstream 68283 15777713 ~ 15783005 (-)
G37064 NA non-coding upstream 103485 15812915 ~ 15813933 (-)
alkbh2 alkbh2,LOC107746816,LOC107552593,LOC107676640 other downstream 124566 15568019 ~ 15578967 (-)
npr3 LOC107681138,LOC107746807,LOC107552598,LOC107602007,LOC107708637,LOC107661273 other downstream 336120 15350016 ~ 15367413 (-)
zfr zfr,LOC107746805,LOC107681158,LOC107552600,LOC107602019 other downstream 395093 15293856 ~ 15308440 (-)
pdzd2 pdzd2,LOC107746802,LOC107681406,LOC107661237 other downstream 438588 15205951 ~ 15264945 (-)
LOC122345141 LOC107752369,LOC107661250,LOC107567461 other downstream 1401152 14292063 ~ 14302381 (-)
emc6 emc6,LOC107680863,LOC107746824,LOC107552584,LOC107553592,LOC107552561 other upstream 15597 15725027 ~ 15728108 (-)
fam222ba LOC107552581,LOC107746861,LOC107680853,LOC107676666,LOC107553569,LOC107680837,LOC107552580,LOC107746822,LOC107746829,LOC107680824,LOC107552579,LOC107676664,LOC107553594,LOC107718349 other upstream 33310 15742740 ~ 15808380 (-)
cxcl11.4 LOC107718357,LOC107746875,LOC107553578,LOC107676639,LOC107680777,LOC107552559,LOC107553571 other upstream 130896 15840326 ~ 15841678 (-)
LOC122345695 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 other upstream 136606 15846036 ~ 15847036 (-)
cxcl11.1 LOC107680787,LOC107552555,LOC107718351,LOC107553572,LOC107676630 other upstream 145490 15854920 ~ 15855808 (-)

Expression


Co-expression Network