G36986


Basic Information

Item Value
gene id G36986
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15713675 ~ 15713975 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU54544
gtttgtgtgttataCGGCTTCTGCCTTCAATCTTTCCTTGCCATCAGTTAAGGCCAGATTTATTGGTTTagataaaaaattataactgtatttggcatttttaatgtaatgttatttaacCAAGGAAATGTGACAACACAGATCGCATCTGCTTTTTGGAATATAATATGCATCATTAacgcttttattaatttaaaaataaagggcGACAAACAATCGTGGCACATAAAAATAGcctacataaaaatgtataatagtaatagtaatacaAATGTGCGAACTGGTGGAAGCTGCCACTGAC

Function

GO:

id name namespace
GO:0009063 cellular amino acid catabolic process biological_process
GO:0009078 pyruvate family amino acid metabolic process biological_process
GO:0009080 pyruvate family amino acid catabolic process biological_process
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901606 alpha-amino acid catabolic process biological_process
GO:0046395 carboxylic acid catabolic process biological_process
GO:0042851 L-alanine metabolic process biological_process
GO:0042853 L-alanine catabolic process biological_process
GO:0044282 small molecule catabolic process biological_process
GO:0006522 alanine metabolic process biological_process
GO:0006524 alanine catabolic process biological_process
GO:0016054 organic acid catabolic process biological_process
GO:0005102 signaling receptor binding molecular_function
GO:0005179 hormone activity molecular_function
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54544 True 301 lncRNA 0.33 1 15713675 15713975

Neighbor

gene id symbol gene type direction distance location
ncor1 ncor1,LOC107676644,LOC107746860,LOC107553567,LOC107680951,LOC107552540 coding downstream 29239 15616601 ~ 15684436 (-)
LOC122345891 NA coding downstream 97213 15614467 ~ 15616462 (-)
LOC122345011 NA coding downstream 102581 15605437 ~ 15611094 (-)
si:dkey-65b12.6 LOC107746818,LOC107680961,LOC107552589 coding downstream 109343 15589884 ~ 15604332 (-)
atxn2 LOC107746814,LOC107680995,LOC107552590,LOC107708645,LOC107676658 coding downstream 158989 15534694 ~ 15554686 (-)
flot2a flot2,flot2a,LOC107746832,LOC107676660 coding upstream 107894 15821869 ~ 15838717 (-)
LOC122345699 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 coding upstream 129018 15842993 ~ 15843844 (-)
LOC122345991 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 coding upstream 135846 15849821 ~ 15850648 (-)
grsf1 grsf1,LOC107746834,LOC107680726,LOC107579879 coding upstream 161618 15875593 ~ 15878477 (-)
si:dkey-245n4.2 si:dkey-245n4.2,LOC107746839,LOC107580348 coding upstream 201389 15915364 ~ 15922607 (-)
G36969 NA non-coding downstream 148413 15564098 ~ 15565262 (-)
G36968 NA non-coding downstream 151312 15562148 ~ 15562363 (-)
G36967 NA non-coding downstream 151597 15561722 ~ 15562078 (-)
G36811 NA non-coding downstream 544317 15169047 ~ 15169358 (-)
G36714 NA non-coding downstream 808054 14905385 ~ 14905621 (-)
G37067 NA non-coding upstream 15228 15729203 ~ 15729893 (-)
G37076 NA non-coding upstream 33547 15747522 ~ 15749497 (-)
G37079 NA non-coding upstream 63738 15777713 ~ 15783005 (-)
G37064 NA non-coding upstream 98940 15812915 ~ 15813933 (-)
G37058 LOC107718333,LOC107746835,LOC107552574,LOC107680737,LOC107676661 non-coding upstream 147102 15861077 ~ 15865160 (-)
cenpv cenpv,LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 4245 15703533 ~ 15709430 (-)
alkbh2 alkbh2,LOC107746816,LOC107552593,LOC107676640 other downstream 134708 15568019 ~ 15578967 (-)
npr3 LOC107681138,LOC107746807,LOC107552598,LOC107602007,LOC107708637,LOC107661273 other downstream 346262 15350016 ~ 15367413 (-)
zfr zfr,LOC107746805,LOC107681158,LOC107552600,LOC107602019 other downstream 405235 15293856 ~ 15308440 (-)
pdzd2 pdzd2,LOC107746802,LOC107681406,LOC107661237 other downstream 448730 15205951 ~ 15264945 (-)
emc6 emc6,LOC107680863,LOC107746824,LOC107552584,LOC107553592,LOC107552561 other upstream 11052 15725027 ~ 15728108 (-)
fam222ba LOC107552581,LOC107746861,LOC107680853,LOC107676666,LOC107553569,LOC107680837,LOC107552580,LOC107746822,LOC107746829,LOC107680824,LOC107552579,LOC107676664,LOC107553594,LOC107718349 other upstream 28765 15742740 ~ 15808380 (-)
cxcl11.4 LOC107718357,LOC107746875,LOC107553578,LOC107676639,LOC107680777,LOC107552559,LOC107553571 other upstream 126351 15840326 ~ 15841678 (-)
LOC122345695 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 other upstream 132061 15846036 ~ 15847036 (-)
cxcl11.1 LOC107680787,LOC107552555,LOC107718351,LOC107553572,LOC107676630 other upstream 140945 15854920 ~ 15855808 (-)

Expression


Co-expression Network