G37079


Basic Information

Item Value
gene id G37079
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15777713 ~ 15783005 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU54690
tgtaacggTTCTGCTTTGAGTGGGGATCGAACCCAGGTCTACTAGACTCAGTGCTCTGTGTAGACAGGCTGAGCTAACTTCCCAACAAATGAATTCAGGTGCAGAGGTAGCAAAAGCCAGAGtcaaaaagtcttcaaaaataaatcaaactttacttgaggaaaagtccaacaaaacaggaatcagtgactccaataaacagggaaaaacaaagtagacatgatagtcaaaaacataaactcaaGACAGACTTATCTCACAGTTGACACTGGAAACcaaggctcaagactgaacaaacaagcatgGCACAAACTCATTAAATAGTGCTGAACACAGGTGTCACCTATCAGGGCAAACGAAAGGAGCAGTTCAGCAGAAGCCTGGAGAGAGGCGCCACCTGCTGACTAGGAGGTGTATTACAGTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54690 True 427 lncRNA 0.44 2 15777713 15783005

Neighbor

gene id symbol gene type direction distance location
ncor1 ncor1,LOC107676644,LOC107746860,LOC107553567,LOC107680951,LOC107552540 coding downstream 93277 15616601 ~ 15684436 (-)
LOC122345891 NA coding downstream 161251 15614467 ~ 15616462 (-)
LOC122345011 NA coding downstream 166619 15605437 ~ 15611094 (-)
si:dkey-65b12.6 LOC107746818,LOC107680961,LOC107552589 coding downstream 173381 15589884 ~ 15604332 (-)
atxn2 LOC107746814,LOC107680995,LOC107552590,LOC107708645,LOC107676658 coding downstream 223027 15534694 ~ 15554686 (-)
flot2a flot2,flot2a,LOC107746832,LOC107676660 coding upstream 38864 15821869 ~ 15838717 (-)
LOC122345699 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 coding upstream 59988 15842993 ~ 15843844 (-)
LOC122345991 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 coding upstream 66816 15849821 ~ 15850648 (-)
grsf1 grsf1,LOC107746834,LOC107680726,LOC107579879 coding upstream 92588 15875593 ~ 15878477 (-)
si:dkey-245n4.2 si:dkey-245n4.2,LOC107746839,LOC107580348 coding upstream 132359 15915364 ~ 15922607 (-)
G37076 NA non-coding downstream 28216 15747522 ~ 15749497 (-)
G37067 NA non-coding downstream 47820 15729203 ~ 15729893 (-)
G36986 NA non-coding downstream 63738 15713675 ~ 15713975 (-)
G36969 NA non-coding downstream 212451 15564098 ~ 15565262 (-)
G36968 NA non-coding downstream 215350 15562148 ~ 15562363 (-)
G37064 NA non-coding upstream 29910 15812915 ~ 15813933 (-)
G37058 LOC107718333,LOC107746835,LOC107552574,LOC107680737,LOC107676661 non-coding upstream 78072 15861077 ~ 15865160 (-)
G37092 NA non-coding upstream 111679 15894684 ~ 15978740 (-)
G37093 aqp3a,LOC107552570,LOC107746837,LOC107680708,LOC107553599 non-coding upstream 123278 15906283 ~ 15910873 (-)
G37098 NA non-coding upstream 155115 15938120 ~ 15938836 (-)
emc6 emc6,LOC107680863,LOC107746824,LOC107552584,LOC107553592,LOC107552561 other downstream 49605 15725027 ~ 15728108 (-)
cenpv cenpv,LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 68283 15703533 ~ 15709430 (-)
alkbh2 alkbh2,LOC107746816,LOC107552593,LOC107676640 other downstream 198746 15568019 ~ 15578967 (-)
npr3 LOC107681138,LOC107746807,LOC107552598,LOC107602007,LOC107708637,LOC107661273 other downstream 410300 15350016 ~ 15367413 (-)
zfr zfr,LOC107746805,LOC107681158,LOC107552600,LOC107602019 other downstream 469273 15293856 ~ 15308440 (-)
cxcl11.4 LOC107718357,LOC107746875,LOC107553578,LOC107676639,LOC107680777,LOC107552559,LOC107553571 other upstream 57321 15840326 ~ 15841678 (-)
LOC122345695 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 other upstream 63031 15846036 ~ 15847036 (-)
cxcl11.1 LOC107680787,LOC107552555,LOC107718351,LOC107553572,LOC107676630 other upstream 71915 15854920 ~ 15855808 (-)
cxcl20 NA other upstream 74235 15857240 ~ 15859335 (-)
LOC122344710 LOC107755722,LOC107681456,LOC107700059,LOC107553585,LOC107727439 other upstream 470947 16253952 ~ 16256992 (-)

Expression


Co-expression Network