G37228 (ncor2,LOC107742750)


Basic Information

Item Value
gene id G37228
gene name ncor2,LOC107742750
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 16486620 ~ 16561741 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU54920
gcattcacaaacacactgacacaTCGACACACGCCTGCAGCCATGTAATGCACTTCCACTGATGGCGTGAgtgcgtgcgtgcgtgcgtgcctGGGGTGGGTTATGGGATACGTGTCTCTGTATGTATGACTGTGTGTAGAGGTATCAAGAGGGCATGAGCGCAGATGGACGTGTGTGTTCCCGTATGTCAGTGTGGACATGAGTACGTGTGTGTTCACGAACATCCCTGTATACGGGAACAAGTTTCTGTTCACAAGCAGCAAACGTTCAGTCCTAGTGTATGCGGCGTGAGGTGTGTGATCACTCGCTGTCTGACAGGGTCTCGTATTGAGAGCACAGCAAAGGTTTGGGTTCTTCCTCCCAGGTGCGGGGTTGAGCCTGGCCCTGTGGAGGCGCTGAAGTGCCCTGCTGCGTTGGGGAAGGAGAGGGTCCTGACATCATCCCGCTGGGGAGACGCATTTGCATGGTCAGGGGGTTACAGGGGAATGGAGTGGGTCCTGGGAGGAAGtaccaaaaataaaacgtttttgcttacataataaatatacacatatatatataa

Function

symbol description
ncor2 Predicted to enable transcription corepressor activity. Acts upstream of or within hematopoietic stem cell differentiation; macrophage differentiation; and neutrophil differentiation. Is expressed in several structures, including anterior axial hypoblast; cardiovascular system; central nervous system; eye; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in osteoarthritis. Orthologous to human NCOR2 (nuclear receptor corepressor 2).

NR:

description
PREDICTED: nuclear receptor corepressor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54920 True 562 TUCP 0.52 2 16486620 16561741

Neighbor

gene id symbol gene type direction distance location
LOC122345769 zmat4a,zmat4,LOC107594996,LOC107587306 coding upstream 76700 16400432 ~ 16409920 (+)
LOC122345865 si:dkey-114c15.7,LOC107597238,LOC107672487,LOC107733230,LOC107592265,LOC107748635 coding upstream 96976 16379355 ~ 16389644 (+)
tmem8b tmem8b,si:dkey-84j12.1,LOC107553610 coding upstream 234848 16144894 ~ 16251772 (+)
LOC122345915 hspb11,zgc:158640,LOC107746844,LOC107681463,LOC107719933,LOC107660270 coding upstream 397707 16087941 ~ 16088913 (+)
nos2a nos2a,LOC107553584,LOC107719931 coding upstream 402865 16076241 ~ 16083755 (+)
edil3a edil3a,edil3,LOC107685241,LOC107669516 coding downstream 474054 17035795 ~ 17162890 (+)
LOC122344732 LOC107570126,LOC107742021,LOC107694705,LOC107675326,LOC107715436,LOC107574130 coding downstream 667653 17229394 ~ 17253899 (+)
LOC122344734 col27a1b,LOC107720245,LOC107672548,LOC107587699,LOC107699687,LOC107731038,LOC107720196,LOC107552608 coding downstream 698411 17260152 ~ 17316269 (+)
LOC122345236 sh2d3c,LOC107731039 coding downstream 758119 17319860 ~ 17328414 (+)
LOC122345919 camsap1,camsap1a,LOC107705949,LOC107675701,LOC107661566 coding downstream 811532 17373273 ~ 17374248 (+)
G37155 NA non-coding upstream 389615 16095985 ~ 16097005 (+)
G37123 NA non-coding upstream 432612 16053032 ~ 16054008 (+)
G37047 NA non-coding upstream 567335 15918506 ~ 15919285 (+)
G37038 NA non-coding upstream 626517 15859759 ~ 15860103 (+)
G36993 NA non-coding upstream 662869 15821892 ~ 15823751 (+)
G37260 NA non-coding downstream 98780 16660521 ~ 16660743 (+)
G37286 NA non-coding downstream 226089 16787830 ~ 16812417 (+)
G37291 NA non-coding downstream 265384 16827125 ~ 16827476 (+)
G37308 NA non-coding downstream 327456 16889197 ~ 16889977 (+)
G37330 NA non-coding downstream 788850 17350591 ~ 17350922 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other upstream 91058 16391797 ~ 16395562 (+)
G36640 NA other upstream 1766133 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 1833709 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 2136629 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 2148855 14333023 ~ 14337765 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 803108 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 964283 17526024 ~ 17527444 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other downstream 2281078 18842819 ~ 18847674 (+)
G37626 LOC107720210 other downstream 2377072 18938813 ~ 18940895 (+)
msh3 msh3,LOC107720281 other downstream 2400581 18962322 ~ 19014100 (+)

Expression


Co-expression Network