LOC122344728 (uprt,LOC107733222,LOC107672530,LOC107680369,LOC107748634)


Basic Information

Item Value
gene id LOC122344728
gene name uprt,LOC107733222,LOC107672530,LOC107680369,LOC107748634
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 16376266 ~ 16378515 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU54936
CGTGCGTCATGTATCATGCTCTCCACCGCTCAACATGGCGAGAAGATAGTGGTACAGATTCACATCATCCGCGGAACAGCCATCATTTAAGTGGACCAGGTGGTTTGGCgtagtgttttcttttttctttctttttattgtttgtcaTATGGAAACGGATCTCATCGAGAAGATGCCGTGCCATAACCAGCAGCTGAATAACAGCGAGAGCCCCGAACACGCCGCGAAGCACGTCCGCTTCGCCCGCAGCAGCCCCGCAGCCGAGACCTGTCAAGACGAGCCGTGCGAAAACCAAACCCCGAGCGACATCCAACGACAAATAGGACCTCAGCTGAAGCTCTTGCCGTTAAATGACCAAATACGAGAACTTCAGACAATCATTCGGGACAAAACTACCAGTAGAGGTGATTTTGTGTTCTGTGCTGATAGATTGATAAGATTAGTGGTGGAGGAGGGTCTCAATCAGCTTCCATACAGTGAATGCACTGTAACTACACCAACAGGACATAAGTATGAAGGTGTGAAGTTTGAAAAGGGAAACTGTGGGGTTAGCATTATGAGGAGTGGGGAGGCCATGGAGCAAGGCCTAAGAGACTGCTGCAGATCAATCCGTATCGGGAAGATTCTGATCCAGAGCGATGAAGAGACACAAAAGGCTAAAGTTTACTATGCAAAGTTCCCTCCTGACATTAGCCGAAGGAAGGTTCTGCTCATGTACCCTATACTTAGTACAGGCAACACTGTAATAGAAGCGGTGCGGGTGCTGAATGAACACGGCCTGCAGGCCAAACATATCATACTACTGAGTCTCTTCTCCACTCCACACGGTAAGACACACGCAGAG
>XM_043238278.1
AGGTTGTTGTTCCCCGGGAGCGTGCGTCATGTATCATGCTCTCCACCGCTCAACATGGCGAGAAGATAGTGGTACAGATTCACATCATCCGCGGAACAGCCATCATTTAAGTGGACCAGGTGGTTTGGCgtagtgttttcttttttctttctttttattgtttgtcaTATGGAAACGGATCTCATCGAGAAGATGCCGTGCCATAACCAGCAGCTGAATAACAGCGAGAGCCCCGAACACGCCGCGAAGCACGTCCGCTTCGCCCGCAGCAGCCCCGCAGCCGAGACCTGTCAAGACGAGCCGTGCGAAAACCAAACCCCGAGCGACATCCAACGACAAATAGGACCTCAGCTGAAGCTCTTGCCGTTAAATGACCAAATACGAGAACTTCAGACAATCATTCGGGACAAAACTACCAGTAGAGGTGATTTTGTGTTCTGTGCTGATAGATTGATAAGATTAGTGGTGGAGGAGGGTCTCAATCAGCTTCCATACAGTGAATGCACTGTAACTACACCAACAGGACATAAGTATGAAGGTGTGAAGTTTGAAAAGGGAAACTGTGGGGTTAGCATTATGAGGAGTGGGGAGGCCATGGAGCAAGGCCTAAGAGACTGCTGCAGATCAATCCGTATCGGGAAGATTCTGATCCAGAGCGATGAAGAGACACAAAAGGCTAAAGTTTACTATGCAAAGTTCCCTCCTGACATTAGCCGAAGGAAGGTTCTGCTCATGTACCCTATACTTAGTACAGGCAACACTGTAATAGAAGCGGTGCGGGTGCTGAATGAACACGGCCTGCAGGCCAAACATATCATACTACTGAGTCTCTTCTCCACTCCACACGGTAAGACACACGCAGAGCCAGCCGTGCATACTTGATTTGTATTCTcattcatgaataaatacatttgtattattttacctTATTGGTaggttttaatgttaataagcTCTAAAGaacaaatgacatttcaaaaaACAGTGCAAAATTAGTTTCAAGTCCAATCCCAATATTTGGAATATgctcatattaaaatgtatttaggaaaaaaactgcccttttttttttctttttttgtatgtatttgcttttactttaattt

Function

symbol description
uprt Predicted to enable GTP binding activity. Predicted to act upstream of or within nucleoside metabolic process. Predicted to be located in nucleus. Predicted to be active in cytosol. Orthologous to human UPRT (uracil phosphoribosyltransferase homolog).

NR:

description
PREDICTED: uracil phosphoribosyltransferase homolog

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54936 False 844 TUCP 0.49 6 16376508 16378495
XM_043238278.1 True 1106 mRNA 0.44 6 16376266 16378515

Neighbor

gene id symbol gene type direction distance location
si:ch211-204c21.1 LOC107746847,LOC107561610,LOC107680600,LOC107719926,LOC107660265,LOC107553608 coding downstream 238103 16115390 ~ 16138163 (-)
LOC122346134 LOC107681310 coding downstream 261842 16095748 ~ 16114424 (-)
mccc2 mccc2,LOC107746845,LOC107680610,LOC107552565,LOC107660263,LOC107553609,LOC107719925 coding downstream 280929 16089065 ~ 16095337 (-)
smn1 smn1,LOC107660268,LOC107553605,LOC107719932,LOC107681471,LOC107746843,LOC107552536 coding downstream 288856 16084818 ~ 16087410 (-)
rtkna rtkn,si:dkey-40c11.1,LOC107676668,LOC107746864,LOC107681349,LOC107718341 coding downstream 309405 16014786 ~ 16066861 (-)
LOC122344715 vps37b,LOC107673398,LOC107594993,LOC107656485,LOC107587312,LOC107709855,LOC107721558 coding upstream 34542 16413057 ~ 16416005 (-)
LOC122344899 LOC107663257,LOC107742022,LOC107570120 coding upstream 879951 17258466 ~ 17259947 (-)
LOC122345238 cfap157,LOC107587652,LOC107672550,LOC107731015 coding upstream 937866 17316381 ~ 17321058 (-)
LOC122344736 apba1,apba1a,LOC107587500,LOC107720269,LOC107756314,LOC107567151 coding upstream 950681 17329196 ~ 17345615 (-)
LOC122345546 LOC107699749,LOC107587493,LOC107756319,LOC107703272,LOC107567144,LOC107720200 coding upstream 976414 17354929 ~ 17359741 (-)
G37212 NA non-coding downstream 44189 16330931 ~ 16332077 (-)
G37092 NA non-coding downstream 397526 15894684 ~ 15978740 (-)
G37098 NA non-coding downstream 437430 15938120 ~ 15938836 (-)
G37093 aqp3a,LOC107552570,LOC107746837,LOC107680708,LOC107553599 non-coding downstream 465393 15906283 ~ 15910873 (-)
G37058 LOC107718333,LOC107746835,LOC107552574,LOC107680737,LOC107676661 non-coding downstream 511106 15861077 ~ 15865160 (-)
G37239 NA non-coding upstream 11409 16389924 ~ 16482086 (-)
G37247 NA non-coding upstream 57954 16436469 ~ 16443757 (-)
G37249 NA non-coding upstream 96193 16474708 ~ 16485114 (-)
G37255 NA non-coding upstream 99304 16477819 ~ 16554560 (-)
G37248 ncor2,LOC107687981,LOC107742750,LOC107566019,LOC107684513 non-coding upstream 114848 16493363 ~ 16494405 (-)
LOC122344710 LOC107755722,LOC107681456,LOC107700059,LOC107553585,LOC107727439 other downstream 119274 16253952 ~ 16256992 (-)
cxcl20 NA other downstream 516931 15857240 ~ 15859335 (-)
cxcl11.1 LOC107680787,LOC107552555,LOC107718351,LOC107553572,LOC107676630 other downstream 520458 15854920 ~ 15855808 (-)
LOC122345695 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 other downstream 529230 15846036 ~ 15847036 (-)
cxcl11.4 LOC107718357,LOC107746875,LOC107553578,LOC107676639,LOC107680777,LOC107552559,LOC107553571 other downstream 534588 15840326 ~ 15841678 (-)
G37258 ncor2,LOC107687981,LOC107684513,LOC107753125 other upstream 218340 16596855 ~ 16633121 (-)
G37277 ncam1a,LOC107681081,LOC107548183,LOC107756101 other upstream 308745 16687260 ~ 16713167 (-)
LOC122345693 NA other upstream 409294 16787809 ~ 16859931 (-)
LOC122344738 acsl1b,LOC107571490,LOC107678619,LOC107758469,LOC107552354,LOC108274927 other upstream 967954 17346469 ~ 17350380 (-)
mtx3 cmya5,mtx3,LOC107699728,LOC107703257,LOC107720274,LOC107756304,LOC107555495,LOC107756305,LOC107720223,LOC107703259 other upstream 2796948 19175463 ~ 19183978 (-)

Expression


Co-expression Network