CI01000004_14703243_14703841


Basic Information

Item Value
gene id CI01000004_14703243_14703841
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14703007 ~ 14704080 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_14703243_14703841.mRNA
ACATTCTGTTTGTGTTCTGAGGATTTTTCTTGTACATGTTACTAAGTAAGTAACCACAAGAGGGTGCTATAAACTACAGCATATGAATAGTGATGACACTGTGGACTATGAAACAGATCTGATCTGTTCTTTCATTTAGATCTCTGGAAGAGGGAGGGTTTAAAGCATTGACATCAGATGTGATCTTGATAAGTGTCTGTAAGAGAAGTCTGTTCAACAGATCATAAGGAACAAACACAATGATACTCCATTCTTTTATTCTGCTTTCTGCACTTGCATATGCAACATATGGAAATGAAATTAAACCAACCAAAACAGAAGAGTTCACTGTCGAGGGTTCAAGTGTTAAATTATCCTGCAGTTATTCATCTGCAGATTATCTTCACTGGTACCGTCAGTATCCCGGATCAGCTCCGGAATTCCTTGTGCTCATCTCAGACATTACAAAAGACGCTAAGGAGTCTGATGTAGATTCCAGATTCACTGCTGAGATCAGAAAAGAAAAAGAAAACTATGTGGATCTGGAGATCTCCTCTGCTGCTCTGAAAGACTCTGCTCTGTATTACTGTGCTCTGGAGCCCACAGTGACAGGAAACACAAGAACACTGTACAAAAACCTGCTTCTGCTCAGAGTGAGGAATCAATGGTCTTCTACAGTTTGAGAGAAATGGGACTCTTGAATCTTGAATTATACCCAGATCCCCTCCAGTATGCCAAGCAGCATCTCGTTGATTCAAATAAGCCACATGCCACAATTTGAGCATTTTTGAAATACATTATTATAAGTTAAAAGTGTTTGTCTAAAACATGGCAGAAATCACTAATTTGCATGTACAAAAGTCATAAACATACAATCAAGTCACACCTTCTTCAGAAATAATTACCCACCCTCATTAAA

Function

NR:

description
T-cell receptor alpha variable region, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_14703243_14703841.mRNA True 898 mRNA 0.39 2 14703007 14704080

Neighbor

gene id symbol gene type direction distance location
CI01000004_14680228_14681912 NA coding downstream 21007 14680198 ~ 14682000 (-)
CI01000004_14676793_14679785 NA coding downstream 23151 14676422 ~ 14679856 (-)
CI01000004_14664077_14671104 NA coding downstream 30987 14663751 ~ 14672020 (-)
CI01000004_14662741_14663250 NA coding downstream 39514 14662596 ~ 14663493 (-)
CI01000004_14655837_14658862 NA coding downstream 43998 14655769 ~ 14659009 (-)
CI01000004_14709151_14709649 NA coding upstream 4979 14709059 ~ 14709719 (-)
CI01000004_14713133_14720728 NA coding upstream 8907 14712987 ~ 14720800 (-)
CI01000004_14722691_14723147 NA coding upstream 18501 14722581 ~ 14723237 (-)
CI01000004_14725359_14726043 NA coding upstream 21192 14725272 ~ 14726845 (-)
CI01000004_14727229_14729780 NA coding upstream 22852 14726932 ~ 14729895 (-)
G34461 NA non-coding downstream 9689 14687437 ~ 14693318 (-)
CI01000004_14618502_14618962 NA non-coding downstream 84021 14618156 ~ 14619037 (-)
CI01000004_14612987_14614652 NA non-coding downstream 89562 14612987 ~ 14614652 (-)
G33758 NA non-coding downstream 113979 14588598 ~ 14589028 (-)
CI01000004_14557340_14560918 TRAC non-coding downstream 145101 14557281 ~ 14561042 (-)
G34479 NA non-coding upstream 2643 14706723 ~ 14707120 (-)
CI01000004_14756092_14758171 NA non-coding upstream 53617 14755814 ~ 14758237 (-)
CI01000004_14758580_14768474 NA non-coding upstream 61604 14758528 ~ 14768680 (-)
CI01000004_14770317_14773615 NA non-coding upstream 67167 14770286 ~ 14774000 (-)
G34459 NA other downstream 29992 14672539 ~ 14673015 (-)
G33783 NA other downstream 64533 14637851 ~ 14638474 (-)
CI01000004_14591958_14594875 NA other downstream 107881 14591276 ~ 14594875 (-)
G33756 NA other downstream 117262 14585171 ~ 14585745 (-)
CI01000004_14742838_14744316 NA other upstream 39772 14742807 ~ 14744507 (-)
CI01000004_14749034_14751685 NA other upstream 47091 14748304 ~ 14753596 (-)
CI01000004_14775109_14792782 NA other upstream 78051 14774282 ~ 14792784 (-)

Expression


Co-expression Network