G37626 (LOC107720210)


Basic Information

Item Value
gene id G37626
gene name LOC107720210
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 18938813 ~ 18940895 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU55500
GCCGaatccttttttttatcttttgtaatAACAAGACCTCATCTTCATCACCATTGTTATCTGTGGGCAACTCACATTTCACAGAAGGGTTTATAGTGGCCAAAAGGGCTGGTAAAGTAAAGCACGACATGAAACGTGCCTTCAAAAGCTGGTATGCTGGATTTGAGGCAAACCTTTCTGCAATCATTTTGCGGATGGCAGCTACTTGAGCTGCTTCCTCCCTATAGTTTTGATACTCAACTGGCAAGATATTCACTGCATTTGCAAGCAGAGATTGTTTAACTTTGAGCAAAGAAGTCAGTGTTTTGATGCTGGCGGCAGATGGTGGAAGGTATGGCAAAGACATCTCTAAATGAGGTAGTGGAATTCCACCTTTTCCATTTATCCAGTCATCTACTTCAGATGATTGCTCAGGGAATATCAAGTGAGTATTAAAGCTAACAACATCAGAGGGAATATCAGAAAGAGGGAGTAATGGCTTACTTAATGTTCTGATTTGAGGTATTTCTGATGGAGCAACAATCTGGGGTGAAGAAGCCACGATCTGAACTGATGGAACCACAGGCTGAGGTGGTGGAGCCACAATCTGAGGTGATGGAGCCCCAATGCGAGCTAAAGGAGTCACAATCTGAGGTGATGGAGTCACAATCTGAGGTGATGGAGCCCCAATGCGAGCTAAAGGAGTCACAATCTGAGGTGATGGAGCCACAATCTGAGGTGATGGAGCCACAATCTGAGGTGATGGAGCCCCAATGTGAGCTAAAGGAGTCACAATCTGAGGTGACCAAGCCACAATATGAGCTAATGGTGCTACAATCTGAGGATATTGAGCTATAACCTGAGGTGAAAGTGCAATTGGTGTTCTAGAAGCAGAAAGTGGGCTCAATATTGTGCCGGGCAAAgctttttgttggaggacagttGGCAGCTGATTAGTTCTCACAAGAACGCAGCCATTTTCAGTAACACCAGGAGACTTTGCCACTGAAACATTATTTGTTGACTTCAGAAAGACTGGTGAACTAGACACAGGTGGCACAGTCAAGGGTACTtgaagaaaactaaaaacagcAGGAGATACTCTGGAACCAGTTGATGTAGATGTCTGATACTGCTTTACAATACATTCCTCTGAAGGGGAGTCTGAGTAGCTCTTCATAGCATCCTTTTTAATAGGTGTCGGGGATAACATCTGAGAACTATGAAGCTCACTTTTGCTCTGTACTATGGTAGAAGTAGATGAAAGAGGTGTCTGGTTGCCATTGGGGTTAATGTTGTCAGAGGGAGTCTTTAGGGTATCTTTGGAGGCATTTGAGACTGAAGAATGTAAAAGGGCAGGACTAACAGAGGAAGGAGCAACAACCAGTGCAGATGATGATGGGTATAGATTAGTTGAAACAGATGGACTACTACTGTTATTCAGGAAGGAACTATTTGGCATAGTTAGTGTCTGGTTGCTTGGGATATTAGCAGAAAGTGGACCAGTTACTTGTACCAAATTGGTGGTAAAAATCCAATTTATTGGCTGCGTCTGCAATGTAATATTTGGAAAAACAACATTCAGTTTTTCTTGATTTCGTTTTGGTGACTGTTTTTTCCTATCTTTAGCTTTAGTTTCTTCCATTAGGGCTTGGCCTTTCTCAGTAGGTTTGCGAATGCGTTTTGCAGATTGGATGCTGTTTGATTCCTCTAAACTTGGGGTTGAGGCCATGACAGGTTGTGCAGGTGCAGTCGGCTGCATTAGCGGCATAGGATTCTGTGATAAAACTTGTGGTGCCGACTTAATTAGTAAAGGCTGCACTGCCCTCTGCTTGTTTGGCTGTGTAATGACAAGAGTCTTGGGTTGAACCAAAGTTGAGGTTGTCATCTGCATGACTGGCAGTTGAAGAGAATTGAGAAGAACTGGCTGCAGTGGAGGTGGATGTTGAGGAGGTTCTGCAGGTCTCATGTGCTGAGCTTTCATTTTTGCATCCTTAAGAATGGCTGA
>TU55503
GCCGaatccttttttttatcttttgtaatAACAAGACCTCATCTTCATCACCATTGTTATCTGTGGGCAACTCACATTTCACAGAAGGGTTTATAGTGGCCAAAAGGGCTGGTAAAGTAAAGCACGACATGAAACGTGCCTTCAAAAGCTGGTATGCTGGATTTGAGGCAAACCTTTCTGCAATCATTTTGCGGATGGCAGCTACTTGAGCTGCTTCCTCCCTATAGTTTTGATACTCAACTGGCAAGATATTCACTGCATTTGCAAGCAGAGATTGTTTAACTTTGAGCAAAGAAGTCAGTGTTTTGATGCTGGCGGCAGATGGTGGAAGGTATGGCAAAGACATCTCTAAATGAGGTAGTGGAATTCCACCTTTTCCATTTATCCAGTCATCTACTTCAGATGATTGCTCAGGGAATATCAAGTGAGTATTAAAGCTAACAACATCAGAGGGAATATCAGAAAGAGGGAGTAATGGCTTACTTAATGTTCTGATTTGAGGTATTTCTGATGGAGCAACAATCTGGGGTGAAGAAGCCACGATCTGAACTGATGGAACCACAGGCTGAGGTGGTGGAGCCACAATCTGAGGTGATGGAGCCCCAATGCGAGCTAAAGGAGTCACAATCTGAGGTGATGGAGTCACAATCTGAGGTGATGGAGCCCCAATGCGAGCTAAAGGAGTCACAATCTGAGGTGATGGAGCCACAATCTGAGGTGATGGAGCCCCAATGTGAGCTAAAGGAGTCACAATCTGAGGTGACCAAGCCACAATATGAGCTAATGGTGCTACAATCTGAGGATATTGAGCTATAACCTGAGGTGAAAGTGCAATTGGTGTTCTAGAAGCAGAAAGTGGGCTCAATATTGTGCCGGGCAAAgctttttgttggaggacagttGGCAGCTGATTAGTTCTCACAAGAACGCAGCCATTTTCAGTAACACCAGGAGACTTTGCCACTGAAACATTATTTGTTGACTTCAGAAAGACTGGTGAACTAGACACAGGTGGCACAGTCAAGGGTACTtgaagaaaactaaaaacagcAGGAGATACTCTGGAACCAGTTGATGTAGATGTCTGATACTGCTTTACAATACATTCCTCTGAAGGGGAGTCTGAGTAGCTCTTCATAGCATCCTTTTTAATAGGTGTCGGGGATAACATCTGAGAACTATGAAGCTCACTTTTGCTCTGTACTATGGTAGAAGTAGATGAAAGAGGTGTCTGGTTGCCATTGGGGTTAATGTTGTCAGAGGGAGTCTTTAGGGTATCTTTGGAGGCATTTGAGACTGAAGAATGTAAAAGGGCAGGACTAACAGAGGAAGGAGCAACAACCAGTGCAGATGATGATGGGTATAGATTAGTTGAAACAGATGGACTACTACTGTTATTCAGGAAGGAACTATTTGGCATAGTTAGTGTCTGGTTGCTTGGGATATTAGCAGAAAGTGGACCAGTTACTTGTACCAAATTGGTGGTAAAAATCCAATTTATTGGCTGCGTCTGCAATGTAATATTTGGAAAAACAACATTCAGTTTTTCTTGATTTCGTTTTGGTGACTGTTTTTTCCTATCTTTAGCTTTAGTTTCTTCCATTAGGGCTTGGCCTTTCTCAGTAGGTTTGCGAATGCGTTTTGCAGATTGGATGCTGTTTGATTCCTCTAAACTTGGGGTTGAGGCCATGACAGGTTGTGCAGGTGCAGTCGGCTGCATTAGCGGCATAGGATTCTGTGATAAAACTTGTGGTGCCGACTTAATTAGTAAAGGCTGCACTGCCCTCTGCTTGTTTGGCTGTGTAATGACAAGAGTCTTGGGTTGAACCAAAGTTGAGGTTGTCATCTGCATGACTGGCAGTTGAAGAGAATTGAGAAGAACTGGCTGCAGTGGAGGTGGATGTTGAGGAGGTTCTGCAGGTCTCATGTGCTGAGCTTTCATTTTTGCATCCTTAAGAATGGCTGA

Function

NR:

description
PREDICTED: snRNA-activating protein complex subunit 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55500 True 1987 TUCP 0.44 2 18938813 18940895
TU55503 False 1966 TUCP 0.43 2 18938813 18940895

Neighbor

gene id symbol gene type direction distance location
pomt1 LOC107720285,LOC107699719,LOC107587516,LOC107756274,LOC107555474,LOC107703250 coding upstream 17298 18914683 ~ 18921515 (+)
LOC122345689 NA coding upstream 24733 18900511 ~ 18914080 (+)
gcnt4a LOC107699693,LOC107720226,LOC107587561,LOC107703224,LOC107555473,LOC107756273 coding upstream 47507 18890017 ~ 18891306 (+)
LOC122345996 NA coding upstream 48878 18885057 ~ 18889935 (+)
ankrd31 LOC107699692,LOC107587543,LOC107720237 coding upstream 53928 18879039 ~ 18884885 (+)
ubac1 ubac1,LOC107699722,LOC107587514,LOC107555477,LOC106579794 coding downstream 12482 18953377 ~ 18961721 (+)
rasgrf2b rasgrf2b,rasgrf2,LOC107720279,LOC107756301,LOC107703251,LOC108423655 coding downstream 74416 19015311 ~ 19068269 (+)
ckmt2b ckmt2,ckmt2b,LOC107720280 coding downstream 128010 19068905 ~ 19074630 (+)
tent2 LOC107720275,LOC107699727,LOC107587508,LOC107756276,LOC107703258 coding downstream 216964 19157859 ~ 19164155 (+)
cmya5 cmya5,LOC107699728,LOC107720274,LOC107703257,LOC107555495,LOC107756304 coding downstream 223622 19164517 ~ 19177886 (+)
G37620 NA non-coding upstream 11811 18925437 ~ 18927002 (+)
G37619 NA non-coding upstream 13380 18925210 ~ 18925433 (+)
G37618 NA non-coding upstream 14137 18923302 ~ 18924676 (+)
G37540 NA non-coding upstream 188758 18678596 ~ 18750055 (+)
G37497 NA non-coding upstream 548747 18373499 ~ 18390066 (+)
G37734 NA non-coding downstream 347121 19288016 ~ 19288328 (+)
G37843 NA non-coding downstream 653175 19594070 ~ 19647075 (+)
G37951 NA non-coding downstream 818816 19759711 ~ 19760204 (+)
G37956 NA non-coding downstream 853548 19794443 ~ 19867398 (+)
G37958 LOC107745529,LOC107672542,LOC107720246,LOC107552607 non-coding downstream 932347 19873242 ~ 19874144 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other upstream 91139 18842819 ~ 18847674 (+)
LOC122345691 NA other upstream 1411369 17526024 ~ 17527444 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other upstream 1565954 17364849 ~ 17372859 (+)
G37228 ncor2,LOC107742750 other upstream 2377072 16486620 ~ 16561741 (+)
G37227 NA other upstream 2378081 16474708 ~ 16560732 (+)
msh3 msh3,LOC107720281 other downstream 21427 18962322 ~ 19014100 (+)
nrarpb nrarpb,nrarpa,nrarp,LOC108255347,LOC107595556 other downstream 766393 19707288 ~ 19710070 (+)
col27a1b col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699 other downstream 1026682 19967577 ~ 20035380 (+)
lix1 lix1,LOC107552634,LOC107699708,LOC107587723,LOC107672536 other downstream 1202388 20143283 ~ 20151686 (+)
G38092 LOC107699781,LOC107552636,LOC107587661,LOC107672574 other downstream 1244140 20185035 ~ 20513916 (+)

Expression


Co-expression Network