G37800


Basic Information

Item Value
gene id G37800
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 19282377 ~ 19282691 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU55751
CAATCATTATGTTTATGCAGTTATAAATGCTTTGCGTTTCTAACATTCAACAAAGGTAGcattactaaattaaaacacCTAATGCCAAATTAAATAGCACACAGCTTAAAGGCTCACCAGATGTGTAATATTTCGTCTTATTTCATGTAGTCATCCGACACACTGTGACATGTAAACgtgaaatgaataaacactTCTAGTAGCTCTACACCTTCTAATCTGGCCTACTTTACTTTGCACTGAACGGGGGCCTTCACGATTAACGCTGTACCTCTGATTAATCACAAAAACCTGTGTTGTATCCTTACACTGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55751 True 315 lncRNA 0.37 1 19282377 19282691

Neighbor

gene id symbol gene type direction distance location
cdk7 cdk7,LOC107756278,LOC107720222,LOC107703229,LOC107699696 coding downstream 61211 19217735 ~ 19221166 (-)
serinc5 serinc5,LOC107756307,LOC107699732,LOC107555497,LOC107703261 coding downstream 65638 19196018 ~ 19216739 (-)
homer1b homer1b,LOC107720277,LOC107699726,LOC107555494,LOC107703256,LOC108423652,LOC108255354 coding downstream 125859 19134372 ~ 19156518 (-)
lhfpl2b lhfpl2b,LOC107720278,LOC107587511,LOC107699725,LOC107756302,LOC107555493,LOC107703255 coding downstream 151045 19124324 ~ 19131332 (-)
otpb otpb,otp,LOC107720233,LOC107587559,LOC107555478,LOC108423578 coding downstream 199299 19079743 ~ 19083078 (-)
LOC122345207 LOC107720271,LOC107699734,LOC107587503,LOC107756310,LOC107703263 coding upstream 14608 19297299 ~ 19313145 (-)
erap2 erap2,LOC107699735,LOC107756311,LOC107703265,LOC107720206 coding upstream 31457 19314148 ~ 19323539 (-)
rgmb rgmb,LOC107555502,LOC107756312,LOC107720270,LOC107699736,LOC107703266,LOC107587502 coding upstream 45461 19328152 ~ 19340602 (-)
si:ch211-117c19.1 LOC107703232,LOC107555504,LOC107756280,LOC108423640,LOC107577894 coding upstream 137191 19419882 ~ 19424139 (-)
mamdc2a mamdc2,LOC107699737,LOC107703267 coding upstream 141507 19424198 ~ 19441113 (-)
G37799 NA non-coding downstream 285 19281865 ~ 19282092 (-)
G37792 NA non-coding downstream 56948 19224352 ~ 19225429 (-)
G37776 NA non-coding downstream 149233 19132813 ~ 19133144 (-)
G37774 NA non-coding downstream 159069 19123025 ~ 19123308 (-)
G37757 ckmt2b,ckmt2,LOC107720280,LOC107756255 non-coding downstream 206603 19068914 ~ 19075774 (-)
G37801 NA non-coding upstream 3936 19286627 ~ 19286848 (-)
G37877 NA non-coding upstream 223230 19505921 ~ 19510282 (-)
G37926 NA non-coding upstream 419378 19702069 ~ 19702343 (-)
G37928 NA non-coding upstream 420729 19703420 ~ 19703685 (-)
G38019 NA non-coding upstream 673737 19956428 ~ 19956662 (-)
mtx3 cmya5,mtx3,LOC107699728,LOC107703257,LOC107720274,LOC107756304,LOC107555495,LOC107756305,LOC107720223,LOC107703259 other downstream 98399 19175463 ~ 19183978 (-)
LOC122344738 acsl1b,LOC107571490,LOC107678619,LOC107758469,LOC107552354,LOC108274927 other downstream 1931997 17346469 ~ 17350380 (-)
LOC122345693 NA other downstream 2422446 16787809 ~ 16859931 (-)
G37277 ncam1a,LOC107681081,LOC107548183,LOC107756101 other downstream 2569210 16687260 ~ 16713167 (-)
G37258 ncor2,LOC107687981,LOC107684513,LOC107753125 other downstream 2649256 16596855 ~ 16633121 (-)
kcnt1b LOC107720246,LOC107699766,LOC107672542 other upstream 582328 19865019 ~ 19935576 (-)
G38058 NA other upstream 768968 20051659 ~ 20055798 (-)
G38140 si:ch211-236k19.4,LOC107552622,LOC107740829,LOC107699705,LOC107731026,LOC107672535,LOC107587659 other upstream 842898 20125589 ~ 20127390 (-)
LOC122345844 ppil3 other upstream 1112040 20394731 ~ 20396734 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other upstream 1623352 20906043 ~ 20936097 (-)

Expression


Co-expression Network