G38156


Basic Information

Item Value
gene id G38156
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 20276668 ~ 20279101 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU56349
CTGAAATTTAATAGTCCTTTGAAGAGACATAATATAATAGGACAATAAACAATACACCCtccatttgttttgtaaaaaagaaCGAGTGAGCCGTCCTCAGCTCTTCAGCTCTCAGGTGAGGGTACCATGAAAACAAATGGCAGAGGAACAGAGAAGCCTTTGCACATAAACCCCTTCCCTCAGTCCAGGTTTGAGGGCACGgcctcattttaaaaaaacgaatattTACACCAACAATGTGTACAATATAGAACAGACAAAATAATGACGTAGAGAAAACAAATTACACTTTGTACAAAAATAgatcattcttttaaaatgcatctctTTCATGTTTTACTGACATGTTCTGTGATGGATTGGTGTCTTACAGGGAAATATAGCGGCACATGAGGATTGTAGCTGATATCAGATCAAGTGTGTCCCGCTCCTGATGGTTTAACAAACCCTGTTTGACACAGTTTGAATCCAAGAGCGTTTacaatgtctgtgtttttcctATACCTCAGCAAAGGGGTTTCTAGTTCTTGTCTGCACATTCTAAATATGCTGGTTTTGGAGTAATGAAAGGCCAAAGATGTCCAATGACAGAACTAACATAAGTCCGCTGATCTTCCATGACACCGATTCAAATTTCAGCCTGGTCGAAGCTTAAAAACACGACCACTAGAACTTAAGGTTGTGTATAACAATCACATGGACAATAGATTCATGTGTATAATCAACTGAATACTCATGTTGTTGTTACCGGCGTTATCATTCAGCAGAACGTGTCATATAAATCAGTAGGTCTTTTGCACTACGTCTGCTAATGACAACTGCTACGCAGCTCAAATAACTCGCGAATTACAAAAACGGTAATTAAAATTCATCGTCATCATGAAAACACTGGTTCAGATTGGCTCAATCTGCAATTGAGGTTTGACGCGTCAATACAAATGTAACGAAATGATCGTTATTACAGTTTCTTCCTTATCACACAGATAAGACTGCAaaacagaaccaaaaaaaactgcatttgaatCAACCTGAGGCTTATTCTGGTAATTGAATTCTGTAAAAACCCAACTGTTAAACTTCATGTAATAGCAAATGAGTAGAGCTGCAATGTCACAACTTTTCCAATAGGGGACAGGCATGGCACTTCCCAAACCTCGCAATTCCCTGAGGCCAGACTATCATCTGGATTCCTTTAACTCCTTGCATATTTTCAAATCACAAACACCCACTTGCTGGGAATtatcagattatatatatatataaacattgaaAATCTTTGGAAATACGTATTTATGCTGAATTATAGAggcaaaacaatgaaaaatcatagtttttttttttacacaattctAACAATgaatcattgtatttttttaaatctagaaaGAGTTCAGCCAGGAGTACACCtgcttttcattctttttagaCCATTCTGTTATTCGCAGGTCCATACATCTTCCAAAAAGAAAGGGACTTGAAGCCAGTTTGCAGTTTGTTCCTCATGAGGATGGCCTTGAAGAATCCTGACGTATGACAATACCGCTTAAAGAAGCAGTTTCTAAGTgcgtggtggtggtggtggtggtggggaaGTGGTCCTGTTCACTGTTCCAATGGCAGATAcagtaatatgttttttaaggACAGCTGCATGAAGAAGTGCATCCGAGGTATTTTGTTTCCTCTCATGAAATCTGAAAATTCACAGCAAAATGATTGTGAGTTCAGAGATGAGGCGGTTTGGCTGCGTACAAAAGCAGAGGTAGACCTCTGTAAGGCAGAAGAAATGAGAAACCTAACACTCCAGAACTGTGTGAGACTTCCCAAATGTGCATGCAAACCAGGAAAAAACTCACTCAATCCATCCTGCGTGCCGTTCCGTAATGAACGGTTACACGCTATTTTGTGGATTGCGCAATGTCTCTGATAAAAGGCCAAGGCAGAATTACTCTGAGTTCAGTCCTCTCCTGTGAGATCAGAGATGTGTCCTGTGGCCTCTGTAGTGTTCTGTACACGAGGGGCGGAGATGAAAAGAAACTTATGTCATTTGGTGTGGAGCTTCGAGCATTTCCATTAGGAAAGTGTCGATGGGCGTGTCTCCGATTAATTTGAAAAAGAAGAGATGTTCGAGACACTTGAGGCCGATGGAGCGCAGGGCAGGCAGACGCAGCAGCAGCTTGGCAAATCTGTCCGTGAAACAATGAACGTCAGTGTTTGGATGAGCACAGTGTAATACttaagcagtttttttaataaattaccgttcaaaagtttgaggtcagtgcgtttttttttttttttttttacatagcattgatgaaaagtgacagtacggacatttataatgttacaaaggatttctgtttcaaatgaatactgttcttttgaactttacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56349 True 2396 lncRNA 0.39 2 20276668 20279101

Neighbor

gene id symbol gene type direction distance location
olfm1a olfm1a,LOC107699781,LOC107552636,LOC107587661,LOC107672574,LOC108423683 coding downstream 91645 20172243 ~ 20185023 (-)
lrrc8ab lrrc8ab,LOC107699779,LOC107552633,LOC107740800,LOC107731052,LOC107587658,LOC107672572,LOC108423682 coding downstream 138232 20132184 ~ 20138436 (-)
ppil3 ppil3 coding downstream 144721 20130459 ~ 20131947 (-)
zgc:101858 zgc:101858,LOC107740831,LOC107699707,LOC107552635,LOC103359842 coding downstream 146447 20127887 ~ 20130221 (-)
ptgs1 ptgs1,LOC107720239,LOC107699776,LOC107672577,LOC107587657,LOC107731054,LOC108255976 coding downstream 167430 20095469 ~ 20109238 (-)
LOC122345833 wdr5,LOC107740805,LOC107741954,LOC107686885 coding upstream 413 20279514 ~ 20285219 (-)
LOC122345847 NA coding upstream 20045 20299146 ~ 20300348 (-)
LOC122345852 edf1,LOC107587662,LOC107740806,LOC107665036,LOC107552639,LOC107731034,LOC108423590 coding upstream 21393 20300494 ~ 20302616 (-)
LOC122344776 LOC107731020,LOC107672533,LOC107552623,LOC107665026,LOC107587726,LOC107740807 coding upstream 25781 20304882 ~ 20307832 (-)
LOC122345827 LOC107552640,LOC107665013,LOC107587663,LOC107731062,LOC107740808,LOC559520,LOC107672520 coding upstream 41817 20320918 ~ 20324565 (-)
G38147 NA non-coding downstream 115874 20155781 ~ 20160794 (-)
G38019 NA non-coding downstream 320006 19956428 ~ 19956662 (-)
G37928 NA non-coding downstream 572983 19703420 ~ 19703685 (-)
G37926 NA non-coding downstream 574325 19702069 ~ 19702343 (-)
G37877 NA non-coding downstream 766386 19505921 ~ 19510282 (-)
G38158 NA non-coding upstream 5522 20284623 ~ 20286229 (-)
G38161 NA non-coding upstream 18207 20297308 ~ 20677930 (-)
LOC122345854 NA non-coding upstream 379993 20659094 ~ 20659471 (-)
G38171 wdr5,LOC107741954 non-coding upstream 380806 20659907 ~ 20660855 (-)
G38172 NA non-coding upstream 383048 20662149 ~ 20662872 (-)
G38140 si:ch211-236k19.4,LOC107552622,LOC107740829,LOC107699705,LOC107731026,LOC107672535,LOC107587659 other downstream 149278 20125589 ~ 20127390 (-)
G38058 NA other downstream 220870 20051659 ~ 20055798 (-)
kcnt1b LOC107720246,LOC107699766,LOC107672542 other downstream 341092 19865019 ~ 19935576 (-)
mtx3 cmya5,mtx3,LOC107699728,LOC107703257,LOC107720274,LOC107756304,LOC107555495,LOC107756305,LOC107720223,LOC107703259 other downstream 1092690 19175463 ~ 19183978 (-)
LOC122344738 acsl1b,LOC107571490,LOC107678619,LOC107758469,LOC107552354,LOC108274927 other downstream 2926288 17346469 ~ 17350380 (-)
LOC122345844 ppil3 other upstream 115630 20394731 ~ 20396734 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other upstream 626942 20906043 ~ 20936097 (-)
G38359 NA other upstream 1085137 21364238 ~ 21369048 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other upstream 1333587 21612688 ~ 21619583 (-)
akap10 akap10,LOC107595480,LOC107587677 other upstream 1529912 21809013 ~ 21826105 (-)

Expression


Co-expression Network