G38161


Basic Information

Item Value
gene id G38161
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 20297308 ~ 20677930 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU56356
tttatttacgAAAAACGAGGGGCTCAGTGTCCAAATCTCAAGATTAGCTTATACATCAGATATTACCATGTAAGTCTGTGCCAAAACATACTTGTCAACTTGCTTTAACTTGCTGAACTTAACATATGCAGCGCTaccaattttaaaattttactcGAAAGAATGACATTTACATGTTATAAACTGCTCAAAAAGTTTaagaaatatactgtaaattgGCATGCAATACAcaaatgttctctctctctctctctctctctctctcataaaaaagaactaaaatacTTAGACCCGAGACAGAGTTGACGAATAAGTagtgaatatacatttatatctgTAATTATATATCCTATGTATCTTTATATCTCTGTCTGCATCACGAAGCTCAGTTTTATTTACTGGGCTCTGCTGGAGGAATTGAGGAAGAGGAACTGTAACAGAAATCATCTTTGAGACAAGGTAGGTTATAGTCACAAGGAACATGTAATGCAATACAGTGGTATAATGAAGAAAATCAAACCATAATTAAAAGCATCCTACATAAAGAAAACCAATGAAGTCACTTTACATCACGATTTCTTGATGCGttttcatgatttaaaaaaacaaaacaaaacaactataCACATTGGCTTCAACTTAATCAGTTATACCGGACCAAtctgactttattttaatgtgccaACTAAACTTAAGGCAACAAGAGCACATCCAATGATTTCTGAGGGGGTTCAGGCTTGAATTCAAGGCTGTTAAAGAAATCCTCGCCAATGCAACAAACCCAGTATGAGTGGCATTACTGCAGccacaagaagaagaagaaaaaaaaaaaaactaatacattcatattttttttttataaagattaTCAGTCATGGTCCATTTCCAAACTATTCTGGATACATGGCAAGAAGTGTCTAGGTACCATTGAAAGCATTCGATACACCATTCGgagaaaaaactaaagtaaaataaagttattaaaattgaGAACGTACATTAGTTGTAATACtttcaactaaaaataactattgTCAAACACGTATCCTTCTGAAATGACATCTAGCACAGCTGCTTGAAATCTTGTCTTTTCTTTACGGAGATCTCCTATTAAGTGGCTATTATTCTAGTATTCACTTAGTTTGGAGTTTCGTGGAGGCCGATTCGTTCCAATCTGCAGCCTTACGGGCGTTTTTTTGAAATTCTCAATGTATTTTTGCCATCATTCATGATAAATACACCCCGTTTCATATATACTGAACTTAAATCACAACTTTGATTGTCCTATGAGTGGACTTAGTAAAGATGAGGCATATCAGATAGAAAGTAGGAAATTAGATACTCAGGAGCCTACAAatgaatagtaaaaaaaaaaaaaaagtaggaagAAGACAAtccaaatagaaaacaaatgagCATATGATATAGattaaaaacgaacaaacaaaacaaaaaaaaaaattcagacatAATTCTACATCAAATACTGAGCTGACAGCACCGGAAGAGAAAGTTTACAGTGTTGCAATGATTACGAAGCCTCTGAAAACGGTTTAATAATGATACTGACAGTTTCCAGATGCGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56356 True 1588 lncRNA 0.34 2 20297308 20677930

Neighbor

gene id symbol gene type direction distance location
LOC122345833 wdr5,LOC107740805,LOC107741954,LOC107686885 coding downstream 12089 20279514 ~ 20285219 (-)
olfm1a olfm1a,LOC107699781,LOC107552636,LOC107587661,LOC107672574,LOC108423683 coding downstream 112285 20172243 ~ 20185023 (-)
lrrc8ab lrrc8ab,LOC107699779,LOC107552633,LOC107740800,LOC107731052,LOC107587658,LOC107672572,LOC108423682 coding downstream 158872 20132184 ~ 20138436 (-)
ppil3 ppil3 coding downstream 165361 20130459 ~ 20131947 (-)
zgc:101858 zgc:101858,LOC107740831,LOC107699707,LOC107552635,LOC103359842 coding downstream 167087 20127887 ~ 20130221 (-)
LOC122345848 NA coding upstream 63 20677993 ~ 20679085 (-)
edf1 edf1,LOC107587662,LOC107740806,LOC107665036,LOC107552639,LOC107731034,LOC108423590 coding upstream 1610 20679540 ~ 20681669 (-)
LOC122345836 LOC107731020,LOC107672533,LOC107552623,LOC107665026,LOC107587726,LOC107740807 coding upstream 5873 20683803 ~ 20686924 (-)
LOC122345826 LOC107552640,LOC107665013,LOC107731062,LOC107587663,LOC107740808,LOC559520,LOC107672520 coding upstream 22320 20700250 ~ 20703893 (-)
qsox2 qsox2,LOC107665046,LOC107552641,LOC107672576,LOC107731056,LOC107587664 coding upstream 28529 20706459 ~ 20717827 (-)
G38158 NA non-coding downstream 11079 20284623 ~ 20286229 (-)
G38156 NA non-coding downstream 18207 20276668 ~ 20279101 (-)
G38147 NA non-coding downstream 136514 20155781 ~ 20160794 (-)
G38019 NA non-coding downstream 340646 19956428 ~ 19956662 (-)
G37928 NA non-coding downstream 593623 19703420 ~ 19703685 (-)
LOC122345856 NA non-coding upstream 49464 20727394 ~ 20728862 (-)
LOC122345858 NA non-coding upstream 99773 20777703 ~ 20778572 (-)
G38217 NA non-coding upstream 192215 20870145 ~ 20870357 (-)
G38218 NA non-coding upstream 207355 20885285 ~ 20886986 (-)
G38221 NA non-coding upstream 296035 20973965 ~ 20976673 (-)
G38140 si:ch211-236k19.4,LOC107552622,LOC107740829,LOC107699705,LOC107731026,LOC107672535,LOC107587659 other downstream 169918 20125589 ~ 20127390 (-)
G38058 NA other downstream 241510 20051659 ~ 20055798 (-)
kcnt1b LOC107720246,LOC107699766,LOC107672542 other downstream 361732 19865019 ~ 19935576 (-)
mtx3 cmya5,mtx3,LOC107699728,LOC107703257,LOC107720274,LOC107756304,LOC107555495,LOC107756305,LOC107720223,LOC107703259 other downstream 1113330 19175463 ~ 19183978 (-)
LOC122344738 acsl1b,LOC107571490,LOC107678619,LOC107758469,LOC107552354,LOC108274927 other downstream 2946928 17346469 ~ 17350380 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other upstream 228113 20906043 ~ 20936097 (-)
G38359 NA other upstream 686308 21364238 ~ 21369048 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other upstream 934758 21612688 ~ 21619583 (-)
akap10 akap10,LOC107595480,LOC107587677 other upstream 1131083 21809013 ~ 21826105 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other upstream 1199151 21877081 ~ 21884022 (-)

Expression


Co-expression Network