G38217


Basic Information

Item Value
gene id G38217
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 20870145 ~ 20870357 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU56449
CCTGCTTGCAGCGGCTGTGCTGTCTCACCGTGTGGTTAGCCCTGTTGCAGTCGATCCAGCAGTCGCTGTTGAACTGAAAGCCATTTGTGCACTTGTAGGTACCGTGGAAAATGGGAGGAGGCGGCTCACACGTGACGGCCACACACTCACCCGACTGCCAGGTTCCATCCTCCGTACACTGCCGCTTAAACGCACGCCTGTGGTACATCACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56449 True 213 lncRNA 0.58 1 20870145 20870357

Neighbor

gene id symbol gene type direction distance location
LOC122344820 LOC107740822,LOC107745476,LOC107672521,LOC107552616,LOC107731008,LOC107587705,LOC107665020 coding downstream 144126 20722066 ~ 20726019 (-)
LOC122345835 LOC107740822,LOC107552616,LOC107665020,LOC107731008,LOC107672521,LOC107587705 coding downstream 148039 20718617 ~ 20722106 (-)
qsox2 qsox2,LOC107665046,LOC107552641,LOC107672576,LOC107731056,LOC107587664 coding downstream 152318 20706459 ~ 20717827 (-)
LOC122345826 LOC107552640,LOC107665013,LOC107731062,LOC107587663,LOC107740808,LOC559520,LOC107672520 coding downstream 166252 20700250 ~ 20703893 (-)
LOC122345836 LOC107731020,LOC107672533,LOC107552623,LOC107665026,LOC107587726,LOC107740807 coding downstream 183221 20683803 ~ 20686924 (-)
dnm1b LOC107595502,LOC107740810 coding upstream 68534 20938891 ~ 20966924 (-)
rab14 rab14,LOC107587668,LOC107595498,LOC108255506,LOC105889591,LOC106587009 coding upstream 199015 21069372 ~ 21074843 (-)
ttf1.6 NA coding upstream 210583 21080940 ~ 21084821 (-)
LOC122345218 timm22,LOC107740820,LOC107665041,LOC107731058,LOC107688620,LOC107587673,LOC107595490 coding upstream 307025 21177382 ~ 21179981 (-)
zswim7 zswim7,LOC107712139,LOC107665024,LOC107740465,LOC107563497,LOC107688637 coding upstream 393291 21263648 ~ 21293809 (-)
LOC122345858 NA non-coding downstream 91573 20777703 ~ 20778572 (-)
LOC122345856 NA non-coding downstream 141283 20727394 ~ 20728862 (-)
G38173 brd3b,LOC107740804,LOC107665032,LOC107731037 non-coding downstream 201671 20667524 ~ 20668474 (-)
G38172 NA non-coding downstream 207273 20662149 ~ 20662872 (-)
G38171 wdr5,LOC107741954 non-coding downstream 209290 20659907 ~ 20660855 (-)
G38218 NA non-coding upstream 14928 20885285 ~ 20886986 (-)
G38221 NA non-coding upstream 103608 20973965 ~ 20976673 (-)
G38220 surf4l,surf4,LOC107595501,LOC107688631,LOC107740812,LOC107665048 non-coding upstream 108752 20979109 ~ 21011904 (-)
G38248 NA non-coding upstream 164526 21034883 ~ 21037628 (-)
G38251 c5 non-coding upstream 169773 21040130 ~ 21040881 (-)
LOC122345844 ppil3 other downstream 473411 20394731 ~ 20396734 (-)
G38140 si:ch211-236k19.4,LOC107552622,LOC107740829,LOC107699705,LOC107731026,LOC107672535,LOC107587659 other downstream 742755 20125589 ~ 20127390 (-)
G38058 NA other downstream 814347 20051659 ~ 20055798 (-)
kcnt1b LOC107720246,LOC107699766,LOC107672542 other downstream 934569 19865019 ~ 19935576 (-)
mtx3 cmya5,mtx3,LOC107699728,LOC107703257,LOC107720274,LOC107756304,LOC107555495,LOC107756305,LOC107720223,LOC107703259 other downstream 1686167 19175463 ~ 19183978 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other upstream 35686 20906043 ~ 20936097 (-)
G38359 NA other upstream 493881 21364238 ~ 21369048 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other upstream 742331 21612688 ~ 21619583 (-)
akap10 akap10,LOC107595480,LOC107587677 other upstream 938656 21809013 ~ 21826105 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other upstream 1006724 21877081 ~ 21884022 (-)

Expression


Co-expression Network