G38252


Basic Information

Item Value
gene id G38252
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 21043366 ~ 21044059 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU56536
CTCTATTGGTTTATGCACAGGCTTCTGTTGAGTTAGTCTGATTCTGCTGATGTCACCTTTAGTCTTGTATTCGATGTCAACAACCATGTCTAATGTAGCTTGACTGGCTAAGATGCTGTACTTGGTAATCGCCTCCAAAGTGAGAATGCTGTCCTGTGGAATGGACGCCCCCTCCATATCTCTGGTCTTGTGTTAACCAGTTCAGGATGGGTTTTGCATAGGCGACTTCACCTCTGGTTAAAGCATTCAGCAGGACGTAAACAGTAGTTTCCACGGTCTTGGCTGTCACATCACTGGGTTTTAACGAATCCTTGTCTGGTTTGGACTCCTGCCAAAAACGAACTGTGCCTGGTTCCCCTGAAAACATGAGACACGCGGACAATGGCtcataatgtgttaaaaatacGAGAGAGTCTAAACTGTGCAGATTTTTTGGTCAAACATGTCTTGATTTTACCATCAACTTGagcctgtttttttatttcttcataaaGACTGACTCCGGGCATACTATGGATGTCTGCAAGTGTCAGTGCATAAGACGCAATTGCTCTAGCATATAAACTTTTAATCTTCTTTGAGTTAGAGATGATGTACTGTGCGCCGCGATCTACAGCATT

Function

GO:

id name namespace
GO:0050878 regulation of body fluid levels biological_process
GO:0001775 cell activation biological_process
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0007599 hemostasis biological_process
GO:0006508 proteolysis biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU56536 True 620 lncRNA 0.43 2 21043366 21044059

Neighbor

gene id symbol gene type direction distance location
dnm1b LOC107595502,LOC107740810 coding downstream 76442 20938891 ~ 20966924 (-)
LOC122344820 LOC107740822,LOC107745476,LOC107672521,LOC107552616,LOC107731008,LOC107587705,LOC107665020 coding downstream 317347 20722066 ~ 20726019 (-)
LOC122345835 LOC107740822,LOC107552616,LOC107665020,LOC107731008,LOC107672521,LOC107587705 coding downstream 321260 20718617 ~ 20722106 (-)
qsox2 qsox2,LOC107665046,LOC107552641,LOC107672576,LOC107731056,LOC107587664 coding downstream 325539 20706459 ~ 20717827 (-)
LOC122345826 LOC107552640,LOC107665013,LOC107731062,LOC107587663,LOC107740808,LOC559520,LOC107672520 coding downstream 339473 20700250 ~ 20703893 (-)
rab14 rab14,LOC107587668,LOC107595498,LOC108255506,LOC105889591,LOC106587009 coding upstream 25313 21069372 ~ 21074843 (-)
ttf1.6 NA coding upstream 36881 21080940 ~ 21084821 (-)
LOC122345218 timm22,LOC107740820,LOC107665041,LOC107731058,LOC107688620,LOC107587673,LOC107595490 coding upstream 133323 21177382 ~ 21179981 (-)
zswim7 zswim7,LOC107712139,LOC107665024,LOC107740465,LOC107563497,LOC107688637 coding upstream 219589 21263648 ~ 21293809 (-)
nanos2 LOC107712138,LOC107665028 coding upstream 250062 21294121 ~ 21295572 (-)
G38251 c5 non-coding downstream 2485 21040130 ~ 21040881 (-)
G38248 NA non-coding downstream 5738 21034883 ~ 21037628 (-)
G38220 surf4l,surf4,LOC107595501,LOC107688631,LOC107740812,LOC107665048 non-coding downstream 31462 20979109 ~ 21011904 (-)
G38221 NA non-coding downstream 66693 20973965 ~ 20976673 (-)
G38218 NA non-coding downstream 156380 20885285 ~ 20886986 (-)
G38254 NA non-coding upstream 106 21044165 ~ 21046644 (-)
G38329 NA non-coding upstream 77057 21121116 ~ 21121412 (-)
G38330 usp2b,LOC107665042,LOC107595488 non-coding upstream 78734 21122793 ~ 21123642 (-)
G38334 NA non-coding upstream 105879 21149938 ~ 21151843 (-)
G38342 fam57a,LOC107740818,LOC107665040,LOC107688621,LOC107595489,LOC107731057,LOC107587715 non-coding upstream 128619 21172678 ~ 21379182 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other downstream 107269 20906043 ~ 20936097 (-)
LOC122345844 ppil3 other downstream 646632 20394731 ~ 20396734 (-)
G38140 si:ch211-236k19.4,LOC107552622,LOC107740829,LOC107699705,LOC107731026,LOC107672535,LOC107587659 other downstream 915976 20125589 ~ 20127390 (-)
G38058 NA other downstream 987568 20051659 ~ 20055798 (-)
kcnt1b LOC107720246,LOC107699766,LOC107672542 other downstream 1107790 19865019 ~ 19935576 (-)
G38359 NA other upstream 320179 21364238 ~ 21369048 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other upstream 568629 21612688 ~ 21619583 (-)
akap10 akap10,LOC107595480,LOC107587677 other upstream 764954 21809013 ~ 21826105 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other upstream 833022 21877081 ~ 21884022 (-)
nrgna nrgna other upstream 2083153 23127212 ~ 23132008 (-)

Expression


Co-expression Network