G38329


Basic Information

Item Value
gene id G38329
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 21121116 ~ 21121412 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU56693
CGGGAATAGACGGGGTGGCGATAGAAGCTTAGCTGGCGAGGGTAAGTTATGTCACATGTTTAATCCTGCGCAAGAGCCTCCCCCATAACCCTTAAGATGCTTACCAGCGGAATTCCAGTTCATCCTCCCGTGTGgcctgaaaaaaagaatattccCGGATTTTCCTAAATATCACGCGCTACTTCGAGATTCGGCAGAAAATCGCACGGCACTGGCTCAGCGTTACGCACTCGATCACTTGGTTGGAGTGGCAGCATACCAGCATACCAGAGTCCTGCTCGGATATTTGCGCTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56693 True 297 lncRNA 0.51 1 21121116 21121412

Neighbor

gene id symbol gene type direction distance location
ttf1.6 NA coding downstream 36295 21080940 ~ 21084821 (-)
rab14 rab14,LOC107587668,LOC107595498,LOC108255506,LOC105889591,LOC106587009 coding downstream 46273 21069372 ~ 21074843 (-)
dnm1b LOC107595502,LOC107740810 coding downstream 154192 20938891 ~ 20966924 (-)
LOC122344820 LOC107740822,LOC107745476,LOC107672521,LOC107552616,LOC107731008,LOC107587705,LOC107665020 coding downstream 395097 20722066 ~ 20726019 (-)
LOC122345835 LOC107740822,LOC107552616,LOC107665020,LOC107731008,LOC107672521,LOC107587705 coding downstream 399010 20718617 ~ 20722106 (-)
LOC122345218 timm22,LOC107740820,LOC107665041,LOC107731058,LOC107688620,LOC107587673,LOC107595490 coding upstream 55970 21177382 ~ 21179981 (-)
zswim7 zswim7,LOC107712139,LOC107665024,LOC107740465,LOC107563497,LOC107688637 coding upstream 142236 21263648 ~ 21293809 (-)
nanos2 LOC107712138,LOC107665028 coding upstream 172709 21294121 ~ 21295572 (-)
LOC122345264 si:ch211-253h3.1,abr,LOC106567975 coding upstream 174847 21296259 ~ 21311401 (-)
LOC122345940 abr,si:ch211-253h3.1,LOC107688618,LOC107731041,LOC107712163,LOC107665039,LOC106567975 coding upstream 302958 21424370 ~ 21672896 (-)
G38254 NA non-coding downstream 74472 21044165 ~ 21046644 (-)
G38252 NA non-coding downstream 77057 21043366 ~ 21044059 (-)
G38251 c5 non-coding downstream 80235 21040130 ~ 21040881 (-)
G38248 NA non-coding downstream 83488 21034883 ~ 21037628 (-)
G38220 surf4l,surf4,LOC107595501,LOC107688631,LOC107740812,LOC107665048 non-coding downstream 109212 20979109 ~ 21011904 (-)
G38330 usp2b,LOC107665042,LOC107595488 non-coding upstream 1381 21122793 ~ 21123642 (-)
G38334 NA non-coding upstream 28526 21149938 ~ 21151843 (-)
G38342 fam57a,LOC107740818,LOC107665040,LOC107688621,LOC107595489,LOC107731057,LOC107587715 non-coding upstream 51266 21172678 ~ 21379182 (-)
LOC122345899 NA non-coding upstream 239599 21361011 ~ 21362123 (-)
G38347 LOC107587672,LOC107731042,LOC107688619,LOC107665038 non-coding upstream 289573 21410985 ~ 21414269 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other downstream 185019 20906043 ~ 20936097 (-)
LOC122345844 ppil3 other downstream 724382 20394731 ~ 20396734 (-)
G38140 si:ch211-236k19.4,LOC107552622,LOC107740829,LOC107699705,LOC107731026,LOC107672535,LOC107587659 other downstream 993726 20125589 ~ 20127390 (-)
G38058 NA other downstream 1065318 20051659 ~ 20055798 (-)
kcnt1b LOC107720246,LOC107699766,LOC107672542 other downstream 1185540 19865019 ~ 19935576 (-)
G38359 NA other upstream 242826 21364238 ~ 21369048 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other upstream 491276 21612688 ~ 21619583 (-)
akap10 akap10,LOC107595480,LOC107587677 other upstream 687601 21809013 ~ 21826105 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other upstream 755669 21877081 ~ 21884022 (-)
nrgna nrgna other upstream 2005800 23127212 ~ 23132008 (-)

Expression


Co-expression Network