G38634


Basic Information

Item Value
gene id G38634
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 22791690 ~ 22793053 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU57175
cgccggACCCGGAGaacggctgaatggattcaaaaacggttcaactcaacttattaactctgggggggttggagaatgagcctatttccaaaagtgctcctgtaaaagctttgtttttacCCTTGACTATCTAGTTTAACTTACGATTACAttgacaatatttaatttatctcATGTGGAGAAAACTATTGTATTATCAATCAATCGCCCTACCGTTTGAACctttatgattttctttcttccataAAATACAATGCCTAAAAACACACGAAAACTATGTTATAAGCCGTTCTGCAAAAATATCTCATTTGTATtctgtgtattttgtgtttatattagcTTTGGATACTCCATATTCACTAAATAGTCAGGTGACAGTATGTGGGCAATATAGATTTTGAATTGAGTGTATTAATCATTAAGACATTTGCACCActtctttcatttttgtatgtttttttttttttttttttttttttacatttttaaatttttcattcttacattctaagaaaaaaagaaaggcacaTAACTGCCATTGGTGCTttaccttttcaaaaagtaaaagtaaaagtacttCATGAtctaatatgtattaatatgcaTCCttaaagtactaatatgtaccgtTTAGACGTAAACAAGGTGCATAGATTAGCCGTTGCACCTTTGGGTATTGCCCCAATAACAGCTTTGTACCTTTTATGAGAGCTTAGGCTTCTTGTTATTGTTTAGAGTGTGTTATTATCAgagttttgatcattttacatttacagatcCTGTTATTAAAGAGTCAAAGTGGTGCCTTATGTTTACAAGAAAGAATGTGCTTCCTGTTTTCTCTTCGGTAGTCATCTGAAACATGACTCTGTTATTTTCGCTTTCTCCCCACCTCTCACAGTCtgctttcctctctctctgttttcttttgagGGAAACACGTAATTGTACTATTAAAGACAGGCACTATTATTTCACATGCTAAAGAGGAAGCACTAGTTggtgaattttctttttttttgtattacggCTAAGCTCTGCAATTCGTTGTGTATGTATAAGGGTTAAGAATAATAcctatgtttatttttaaaggggAAGATGGCATGCAGttgattcatttttgattatGAGTAATTGAGCCTAGTAACTGACCAGCTGAAGATTTTCACTCCACTGTTGGTTATactacagtatatacagtaatgTGGCAGAATCGTGATTAAATTTAGCAAGTTTCTACTTTTCAGACACATTTCTTACCTATTTTAAAGGtattttaagcatgttttaattttctcatGATCATGTTTGTGGAACTGTATGtatctacaaaataaaaaa
>TU57176
cgccggACCCGGAGaacggctgaatggattcaaaaacggttcaactcaacttattaactctgggggggttggagaatgagcctatttccaaaagtgctcctgtaaaagctttgtttttacCCTTGACTATCTAGTTTAACTTACGATTACAttgacaatatttaatttatctcATGTGGAGAAAACTATTGTATTATCAATCAATCGCCCTACCGTTTGAACctttatgattttctttcttccataAAATACAATGCCTAAAAACACACGAAAACTATGTTATAAGCCGTTCTGCAAAAATATCTCATTTGTATtctgtgtattttgtgtttatattagcTTTGGATACTCCATATTCACTAAATAGTCAGGTGACAGTATGTGGGCAATATAGATTTTGAATTGAGTGTATTAATCATTAAGACATTTGCACCActtctttcatttttgtatgtttttttttttttttttttttttttacatttttaaatttttcattcttacattctaagaaaaaaagaaaggcacaTAACTGCCATTGGTGCTttaccttttcaaaaagtaaaagtaaaagtacttCATGAtctaatatgtattaatatgcaTCCttaaagtactaatatgtaccgtTTAGACGTAAACAAGGTGCATAGATTAGCCGTTGCACCTTTGGGTATTGCCCCAATAACAGCTTTGTACCTTTTATGAGAGCTTAGGCTTCTTGTTATTGTTTAGAGTGTGTTATTATCAgagttttgatcattttacatttacagatcCTGTTATTAAAGAGTCAAAGTGGTGCCTTATGTTTACAAGAAAGAATGTGCTTCCTGTTTTCTCTTCGGTAGTCATCTGAAACATGACTCTGTTATTTTCGCTTTCTCCCCACCTCTCACAGTCtgctttcctctctctctgttttcttttgagGGAAACACGTAATTGTACTATTAAAGACAGGCACTATTATTTCACATGCTAAAGAGGAAGCACTAGTTggtgaattttctttttttttgtattacggCTAAGCTCTGCAATTCGTTGTGTATGTATAAGGGTTAAGAATAATAcctatgtttatttttaaaggggAAGATGGCATGCAGttgattcatttttgattatGAGTAATTGAGCCTAGTAACTGACCAGCTGAAGATTTTCACTCCACTGTTGGTTATactacagtatatacagtaatgTGGCAGAATCGTGATTAAATTTAGCAAGTTTCTACTTTTCAGACACATTTCTTACCTATTTTAAAGGtattttaagcatgttttaattttctcatGATCATGTTTGTGGAACTGTATGtatctacaaaataaaaaagcatgaaaattaagtaaaaa

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
TU57175 False 1344 lncRNA 0.33 1 22791710 22793053
TU57176 True 1364 lncRNA 0.33 1 22791690 22793053

Neighbor

gene id symbol gene type direction distance location
clip2 clip2,LOC107709754,LOC107744329 coding downstream 883 22761711 ~ 22790807 (-)
gtf2ird1 gtf2ird1,LOC107600764,LOC107709753 coding downstream 31912 22738083 ~ 22759778 (-)
dtx2 dtx2,LOC107600799,LOC107691768,LOC107709752,LOC107689380 coding downstream 55029 22720728 ~ 22736661 (-)
tmem132e tmem132e,LOC107691770,LOC107689377,LOC107567383 coding downstream 236512 22307188 ~ 22555178 (-)
lig3 lig3,LOC107691772,LOC107710722,LOC107689374 coding downstream 550869 22230880 ~ 22240821 (-)
rasa4 rasa4,LOC107691765,LOC107709756,LOC107744328,LOC107561580,LOC107689382,LOC107600782,LOC108260369,LOC108428505 coding upstream 452 22793505 ~ 22823866 (-)
upk3b LOC107691810,LOC107709747,LOC107600792 coding upstream 33256 22826309 ~ 22831734 (-)
prkrip1 prkrip1,LOC107691809,LOC107600793,LOC107689383 coding upstream 39590 22832643 ~ 22835323 (-)
vps37d si:ch211-284f22.3,LOC107600766,LOC107691764,LOC107744342,LOC107561583,LOC107709757,LOC107689385 coding upstream 51693 22844746 ~ 22874871 (-)
rabep1 rabep1,LOC107691762,LOC107664300 coding upstream 90302 22883355 ~ 22900893 (-)
LOC122344815 NA non-coding downstream 750423 22038360 ~ 22041267 (-)
LOC122346224 NA non-coding downstream 751656 22039901 ~ 22040034 (-)
G38543 NA non-coding downstream 781583 22008886 ~ 22010107 (-)
G38523 NA non-coding downstream 915105 21867615 ~ 21876585 (-)
G38521 NA non-coding downstream 924229 21867128 ~ 21867461 (-)
G38658 nup88,LOC107691763,LOC107709758,LOC107600765,LOC107744326,LOC107664301 non-coding upstream 80918 22873971 ~ 22876437 (-)
G38747 NA non-coding upstream 243404 23036457 ~ 23037470 (-)
G38767 NA non-coding upstream 552536 23345589 ~ 23345797 (-)
G38769 NA non-coding upstream 564521 23357574 ~ 23358147 (-)
G38892 NA non-coding upstream 873788 23666841 ~ 23669869 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other downstream 907668 21877081 ~ 21884022 (-)
akap10 akap10,LOC107595480,LOC107587677 other downstream 965585 21809013 ~ 21826105 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other downstream 1172107 21612688 ~ 21619583 (-)
G38359 NA other downstream 1422642 21364238 ~ 21369048 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other downstream 1855593 20906043 ~ 20936097 (-)
nrgna nrgna other upstream 334159 23127212 ~ 23132008 (-)
LOC122345364 NA other upstream 809183 23602236 ~ 23605748 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other upstream 958827 23751880 ~ 23756588 (-)
G38973 NA other upstream 1094250 23887303 ~ 23887680 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other upstream 1186611 23979664 ~ 23997739 (-)

Expression


Co-expression Network