G38747


Basic Information

Item Value
gene id G38747
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 23036457 ~ 23037470 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU57350
TCTGTCTCCGCTTCCTCCTCCGGTAGATGCTCCAGTGTACAGTCAACGTGAGTGTTTGAAGAGGACGAGTCCTGCGGCTCCCCCGGGACGACACCGTCTCCCGGTCTGGGTGGCACAGAAGAAGGAAGTCCACCTAATCCACAGCCGGTGTCAGACTCTCGGCTGATGACGTCTGTGCCCTGTGCTGCTGGAGCGCTGTAAGGGGGTGACGTGATCGTGTTAGTGCCGTCTGAGCCTTCGCTCGACAGACTGCTCCGTACGGGAGGAGACGACCCGTCTGCCTGCTCTCCTGTGCCCAACGGCAGCTGAGGCTTTGTGGGATGCTGCCTTGGCCCCTGAGCCCTACCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57350 True 349 lncRNA 0.62 2 23036457 23037470

Neighbor

gene id symbol gene type direction distance location
derl2 derl2,LOC107664304,LOC107744323 coding downstream 125586 22906901 ~ 22910871 (-)
rabep1 rabep1,LOC107691762,LOC107664300 coding downstream 135564 22883355 ~ 22900893 (-)
vps37d si:ch211-284f22.3,LOC107600766,LOC107691764,LOC107744342,LOC107561583,LOC107709757,LOC107689385 coding downstream 161586 22844746 ~ 22874871 (-)
prkrip1 prkrip1,LOC107691809,LOC107600793,LOC107689383 coding downstream 201134 22832643 ~ 22835323 (-)
upk3b LOC107691810,LOC107709747,LOC107600792 coding downstream 204723 22826309 ~ 22831734 (-)
cenatac LOC107712938,LOC107600772,LOC107691808,LOC107664297,LOC107556429 coding upstream 7932 23045402 ~ 23049958 (-)
foxr1 zgc:171734,LOC107712932,LOC107691807,LOC107600773 coding upstream 13466 23050936 ~ 23054269 (-)
zgc:194948 NA coding upstream 17476 23054946 ~ 23056425 (-)
pou2f3 pou2f3,LOC107600771,LOC107712933,LOC107691752,LOC107556425,LOC107744320,LOC107664296 coding upstream 19735 23057205 ~ 23066572 (-)
oafb LOC107691805,LOC107744339,LOC107556424,LOC107664291 coding upstream 32640 23070110 ~ 23076394 (-)
G38658 nup88,LOC107691763,LOC107709758,LOC107600765,LOC107744326,LOC107664301 non-coding downstream 160020 22873971 ~ 22876437 (-)
G38634 NA non-coding downstream 243404 22791690 ~ 22793053 (-)
LOC122344815 NA non-coding downstream 995190 22038360 ~ 22041267 (-)
LOC122346224 NA non-coding downstream 996423 22039901 ~ 22040034 (-)
G38543 NA non-coding downstream 1026350 22008886 ~ 22010107 (-)
G38767 NA non-coding upstream 308119 23345589 ~ 23345797 (-)
G38769 NA non-coding upstream 320104 23357574 ~ 23358147 (-)
G38892 NA non-coding upstream 629371 23666841 ~ 23669869 (-)
G38982 NA non-coding upstream 865149 23902619 ~ 23902898 (-)
G39034 NA non-coding upstream 939706 23977176 ~ 23978527 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other downstream 1152435 21877081 ~ 21884022 (-)
akap10 akap10,LOC107595480,LOC107587677 other downstream 1210352 21809013 ~ 21826105 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other downstream 1416874 21612688 ~ 21619583 (-)
G38359 NA other downstream 1667409 21364238 ~ 21369048 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other downstream 2100360 20906043 ~ 20936097 (-)
nrgna nrgna other upstream 89742 23127212 ~ 23132008 (-)
LOC122345364 NA other upstream 564766 23602236 ~ 23605748 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other upstream 714410 23751880 ~ 23756588 (-)
G38973 NA other upstream 849833 23887303 ~ 23887680 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other upstream 942194 23979664 ~ 23997739 (-)

Expression


Co-expression Network