LOC122345364


Basic Information

Item Value
gene id LOC122345364
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 23602236 ~ 23605748 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU57575
CCCTTCAGCCCGGCGGCTCAGGTTTGTCTTTACCTTATTTCGGAAACACGGAAGAACAGAAGTCCCAGCAGAAACAGCGTGCAGCTGTGAAAACTGATTCCCAGCAAACAACTCGCCCCTAGGCCCCTGCCGGAATATTCGAGGAGAATCGGACCGGTTATGTTTCACCAGTTTTAGCAGACTGAAACTGGAACCGAGGCTCTTGATTATTCATTTGTGACGTGCTTCTCCAGCCTGACGCCATGAACATCTCTCTCGAGAACCCCTACGGCGACGTCGCCATTCCTCGTGCCAAACTGCGGGATCAGGCCGACTCCAGCACCATCATCATGAACCCGATGGCCTTGGAGAGCGCCTACAACAACCGCAACTCTGCCTTAAACCCCTACAACAGCTTCAAAACCCCGGGCGAGAGCAACACCTCAAGCGTGCCAGTTTACGGAGAGGCCAGGAACGGCGGCCAGAACCCCCCTCCGGCTTACGCGGTGAGGGAGAGCGACGAGCAGGTGGGGCGCTGCTACGCCTGTTGCTGCCGCTGCCGGAGGAGGAAGTGACACCAGATTCTTCCCGTGAAGCCAAGGATTATGGGTTTACAATTTGGAACCACGATTCCACCTCCCAAAGTTTGGAAGCCAAATGCTCTGCGTTTCTAAAAtgactggattttttttttttttttttttttttagtttttgcacCGTACATGTTTGGACAAAACAAGAGCTGACCTTCCGTGACCGCACCGAAAccttttacattaaatatttacattcggATTACATCATTGTTTTGTTAAGTTGGCACATTTAAGTTCAGCTGAAATTGCACCTACTGAACCACATTAAAGCGGCCTTGTTTTTGTGTGCCTCGAACAATGGCATTCCCAGATACTCGTTTTGGCGTCACCCAATTGTTCCCATACTCTTGCTTTACAATAAgttatttgatttaatgttgTTTCTATAAATGTACGATGAGGTTAAACGGGTTTTACTGGCGCACACAGAGGTGGTCTCTCTTTATGATACGTCCCGGTGGACCTCTCCGGGtttctttagatttttgagCCACACCCTGACATGCCGTCTGACACAGGTGACTGAAACTTGAGGAAAAACCCTTGTTCTTTTTCAAAGGGATGCACCAAAAGACACTCTCAACTTTTACTGCGGAACGAGTGTGCCATCTGAGTTTCTATTGAACGAGCTTTTCTGGTTACTTCAGACATACTGCTGACACATTGTGTCTAGGATTGCCAAAGAGACTACTTAGTGCAACATAAAACCCTTATAGTactaatattatacaattataagCAATACTGTGGTagttacatttaatacaatGGGTCatggacagtttttttttgttttttttggccatAAGACTGTGAGCCTGACTATTGTAAATAGTCCAACCAAAATGTTTTGGATGTCTGTATGTGTTAGGCACGTTGatcagtatatttttttttgatataaaatCACCTTTGTC
>XR_006250995.1
GGTGGCAGTGTAACCACAGGTGTAGTTCATCACTTTAATTATGAACGGCACCATACTTCTGGCTTAATTTTGAATAGCATATCTTTTTTTGCGAATAAAACGTCTTAAAATAAACACcatttgatttgatattttgcTATCGAATGCAATGACACTAAATAGACGGTTtacccaaaatgaacattctctCATCAATTATGTAACGTCGTGTTGTTTCAAATTTGGTTTCAAAGTTTTCTGTCCTACTATCGAAAGTCCAAACATTTGATAGATcaaaatatagatagatagatatatttgTGATTTGAAGATGAAAAACTAATGGGTTTAATGTAACGTGAGGATGAGTAACCGATCACTGAATTTTCGATTCTTAATAAGGACAAATGTGCTTCTTGAATACTTGTGAGCTCACAAAAGCTGCAcgacaataacaaaataattacaaataatggtTTTAGACGAAGAAGCACGGCATGTCACATTGCAGGACACCAGAACTTGTGGCATTAGCTCATGACTGAACAAAATGCCATGGCGTCAATTAAGCATTTCTATTTCTCTTTCGACAACAACCGAACCCAAACGGACAGCTTTCAATGACCTTTCGGCGTTTTAAAACCACAGCGCCCTTTTCTTGTACTTTTCGACTCAGAAGCGGTTTAAAAAGTCAATTCTGTTAATGTTTGACGAACTAAAAACAGTGTGTTCCTCTCATGCCCAGCAATGTTTGCAGAAAGCACCAGCACCTTACACAACAGACTATGGAGTAGCTACATCTgacatttaaagaaaagcatatttttattgcatcttTGTCTGCAATATGTAGCCATACGATAATATTAACAGTAAATTCAGCACTAGCATTCctgagctctctctctcacacacacacacacacacacacacacacacacacacacacacacacaatactcaAGGGTGGGGTCACATACACACTGCAGTGTTTAAACAAGACTCACGGTCAGCTGGATTGCCACCTCCTCCTTTTCCCTTCAGCCCGGCGGCTCAGGTTTGTCTTTACCTTATTTCGGAAACACGGAAGAACAGAAGTCCCAGCAGAAACAGCGTGCAGCTGTGAAAACTGATTCCCAGCAAACAACTCGCCCCTAGGCCCCTGCCGGAATATTCGAGGAGAATCGGACCGGTTATGTTTCACCAGTTTTAGCAGACTGAAACTGGAACCGAGGCTCTTGATTATTCATTTGTGACGTGCTTCTCCAGCCTGACGCCATGAACATCTCTCTCGAGAACCCCTACGGCGACGTCGCCATTCCTCGTGCCAAACTGCGGGATCAGGCCGACTCCAGCACCATCATCATGAACCCGATGGCCTTGGAGAGCGCCTACAACAACCGCAACTCTGCCTTAAACCCCTACAACAGCTTCAAAACCCCGGGCGAGAGCAACACCTCAAGCGTGCCAGTTTACGGAGAGGCCAGGAACGGCGGCCAGAACCCCCCTCCGGCTTACGCGGTGAGGGAGAGCGACGAGCAGGTGGGGCGCTGCTACGCCTGTTGCTGCCGCTGCCGGAGGAGGAAGTGACACCAGATTCTTCCCGTGAAGCCAAGGATTATGGGTTTACAATTTGGAACCACGATTCCACCTCCCAAAGTTTGGAAGCCAAATGCTCTGCGTTTCTAAAAtgactggattttttttttttttttttttttttagtttttgcacCGTACATGTTTGGACAAAACAAGAGCTGACCTTCCGTGACCGCACCGAAAccttttacattaaatatttacattcggATTACATCATTGTTTTGTTAAGTTGGCACATTTAAGTTCAGCTGAAATTGCACCTACTGAACCACATTAAAGCGGCCTTGTTTTTGTGTGCCTCGAACAATGGCATTCCCAGATACTCGTTTTGGCGTCACCCAATTGTTCCCATACTCTTGCTTTACAATAAgttatttgatttaatgttgTTTCTATAAATGTACGATGAGGTTAAACGGGTTTTACTGGCGCACACAGAGGTGGTCTCTCTTTATGATACGTCCCGGTGGACCTCTCCGGGtttctttagatttttgagCCACACCCTGACATGCCGTCTGACACAGGTGACTGAAACTTGAGGAAAAACCCTTGTTCTTTTTCAAAGGGATGCACCAAAAGACACTCTCAACTTTTACTGCGGAACGAGTGTGCCATCTGAGTTTCTATTGAACGAGCTTTTCTGGTTACTTCAGACATACTGCTGACACATTGTGTCTAGGATTGCCAAAGAGACTACTTAGTGCAACATAAAACCCTTATAGTactaatattatacaattataagCAATACTGTGGTagttacatttaatacaatGGGTCatggacagtttttttttgttttttttggccatAAGACTGTGAGCCTGACTATTGTAAATAGTCCAACCAAAATGTTTTGGATGTCTGTATGTGTTAGGCACGTTGatcagtatatttttttttgatataaaatCACCTTTGTCTCTGTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57575 False 1494 TUCP 0.45 2 23602244 23604733
XR_006250995.1 True 2517 lncRNA 0.42 2 23602236 23605748

Neighbor

gene id symbol gene type direction distance location
cryabb cryab,LOC107574702,LOC107603201,LOC107663778,LOC107691740,LOC107721632 coding downstream 39485 23559354 ~ 23562751 (-)
bicdl2 zgc:153929,LOC107574699,LOC107743809,LOC107691738,LOC107663774,LOC107603196 coding downstream 47749 23548715 ~ 23554487 (-)
ufc1 ufc1,LOC107574697,LOC107691797,LOC107603203,LOC107663780 coding downstream 73982 23526578 ~ 23528254 (-)
fdxacb1 fdxacb1,si:dkey-71l1.3,LOC107745124,LOC107574693 coding downstream 78486 23519260 ~ 23523750 (-)
alg9 alg9,LOC107691744,LOC107745128 coding downstream 84088 23510178 ~ 23518148 (-)
prpf4 prpf4,LOC107721635,LOC107691731,LOC107743802,LOC107663789 coding upstream 10428 23616176 ~ 23621160 (-)
slc31a1 slc31a1 coding upstream 17752 23623500 ~ 23632691 (-)
atp6v1g1 atp6v1g1,LOC107709788,LOC107566902,LOC108259956 coding upstream 27933 23633681 ~ 23636168 (-)
pja2 LOC107691728,LOC107721647,LOC107709785,LOC107663782,LOC107603188,LOC107564050 coding upstream 65539 23671287 ~ 23684780 (-)
tmem232 LOC107691726,LOC107751260 coding upstream 127995 23733743 ~ 23740396 (-)
G38769 NA non-coding downstream 244089 23357574 ~ 23358147 (-)
G38767 NA non-coding downstream 256439 23345589 ~ 23345797 (-)
G38747 NA non-coding downstream 564766 23036457 ~ 23037470 (-)
G38658 nup88,LOC107691763,LOC107709758,LOC107600765,LOC107744326,LOC107664301 non-coding downstream 725799 22873971 ~ 22876437 (-)
G38634 NA non-coding downstream 809183 22791690 ~ 22793053 (-)
G38892 NA non-coding upstream 61093 23666841 ~ 23669869 (-)
G38982 NA non-coding upstream 296871 23902619 ~ 23902898 (-)
G39034 NA non-coding upstream 371428 23977176 ~ 23978527 (-)
G39050 NA non-coding upstream 462882 24068630 ~ 24069914 (-)
G39057 NA non-coding upstream 482132 24087880 ~ 24088812 (-)
nrgna nrgna other downstream 470228 23127212 ~ 23132008 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other downstream 1718214 21877081 ~ 21884022 (-)
akap10 akap10,LOC107595480,LOC107587677 other downstream 1776131 21809013 ~ 21826105 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other downstream 1982653 21612688 ~ 21619583 (-)
G38359 NA other downstream 2233188 21364238 ~ 21369048 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other upstream 146132 23751880 ~ 23756588 (-)
G38973 NA other upstream 281555 23887303 ~ 23887680 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other upstream 373916 23979664 ~ 23997739 (-)
G39113 NA other upstream 591957 24197705 ~ 24200496 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other upstream 659716 24265464 ~ 24277304 (-)

Expression


Co-expression Network