G39121


Basic Information

Item Value
gene id G39121
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24214526 ~ 24215160 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU57920
CCGTTGACACTCACCCTGTCCTTCAGTCCTCCCTTTAGATGTGACAGCCTTATAAAAATGCTCACTTTAGATAAACTTCAGTGTTAGCGTGGTATTCCAAATAATACAAAGACATATGCATTGAATCATTGTGGTGCCCTGTcaaaatgtgattaataatacaatagtactttttttgttagtgTGAAAAATGAAATCTTCACCGCACTTACTATTTGGTTGAGTCTGACAACTGAAACTCTCTCCTGCGTTCAAAGCATTTCTGCAGACCTTGGTCTTTCCACACACTCTTGATGGCTTCAGCATGTTTAGGCTCCAGTGACTGTACTGTTTCGGGCATCACACTGTTAAGCATTGCAGCATGTGTctgcaacacacacagaaaagatTTTAGTTTTGCGGAAAAAGATATTTAACACGCCTAACAAAACTTATGCTTTGTCTCAGAACTCCTGGAGCATACTTTGTTTTTTCCATCGGCAAAGGGAATGTTTAGGTGCTCCATGGCTTGAAGCAGGTTGTGAATGGACACAAAGATATTCTGGAACACCAGCTTGGCGTAGGACCTTCTGTCCTCCTCGGTGTAGCCCCTGCCGTGAATGATTCTCATCTGCTTGATAAATGTACTCTTCCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57920 True 635 lncRNA 0.42 1 24214526 24215160

Neighbor

gene id symbol gene type direction distance location
ntrk2b ntrk2b,LOC107691713,LOC107728215,LOC107600581,LOC107730333,LOC107596017,LOC108443857,LOC103044160,LOC108259739,LOC107684341 coding downstream 27041 24166208 ~ 24187485 (-)
tmem150ab tmem150ab,LOC107684378,LOC107600579,LOC107572579,LOC107728219,LOC107691718 coding downstream 116352 24092380 ~ 24098174 (-)
fkbp6 fkbp6,LOC107695148,LOC107600609,LOC107691791,LOC107728208,LOC103911693,LOC107730305 coding downstream 128022 24082446 ~ 24086504 (-)
fzd9a LOC107600608,LOC107728207,LOC107691792,LOC107695150,LOC107572577,LOC107730317 coding downstream 141663 24070279 ~ 24072863 (-)
mrm1 mrm1,LOC107695155,LOC107603181,LOC107730354 coding downstream 171789 24039706 ~ 24042737 (-)
pcsk5a pcsk5a,LOC107728213,LOC107691788,LOC107684380,LOC107730328,LOC107596014,LOC107600598 coding upstream 15186 24230346 ~ 24252631 (-)
LOC122345102 LOC107691787,LOC107600611,LOC107684345,LOC107595997,LOC107684346 coding upstream 38173 24253333 ~ 24264718 (-)
LOC122345313 LOC107681049,LOC107706956,LOC107574963 coding upstream 83370 24298530 ~ 24317831 (-)
cd180 LOC107742410,LOC107681052,LOC107600612 coding upstream 191835 24406995 ~ 24409513 (-)
pmchl LOC107683707,LOC107575048,LOC107738923,LOC107596031,LOC107730319,LOC107684382 coding upstream 315248 24530408 ~ 24530963 (-)
G39120 NA non-coding downstream 1767 24212442 ~ 24212759 (-)
G39059 NA non-coding downstream 107263 24101841 ~ 24107263 (-)
G39057 NA non-coding downstream 125714 24087880 ~ 24088812 (-)
G39050 NA non-coding downstream 144612 24068630 ~ 24069914 (-)
G39034 NA non-coding downstream 235999 23977176 ~ 23978527 (-)
G39122 NA non-coding upstream 2940 24218100 ~ 24218430 (-)
G39123 NA non-coding upstream 3833 24218993 ~ 24219527 (-)
G39137 NA non-coding upstream 62314 24277474 ~ 24280889 (-)
G39274 NA non-coding upstream 199740 24414900 ~ 24490792 (-)
G39285 LOC107738919,LOC107681053,LOC107600587,LOC107595995 non-coding upstream 255451 24470611 ~ 24479055 (-)
G39113 NA other downstream 14030 24197705 ~ 24200496 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other downstream 216787 23979664 ~ 23997739 (-)
G38973 NA other downstream 326846 23887303 ~ 23887680 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other downstream 457938 23751880 ~ 23756588 (-)
LOC122345364 NA other downstream 608778 23602236 ~ 23605748 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other upstream 50304 24265464 ~ 24277304 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other upstream 372564 24587724 ~ 24594116 (-)
naa38 naa38 other upstream 531512 24746672 ~ 24748610 (-)
LOC122345923 NA other upstream 539042 24754202 ~ 24758668 (-)
G39413 LOC102215562 other upstream 1066726 25281886 ~ 25282286 (-)

Expression


Co-expression Network